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  • Negative cofitness for Psyr_3048 from Pseudomonas syringae pv. syringae B728a

    transcriptional regulator, LysR family
    SEED: Transcriptional regulator

    Computing cofitness values with 193 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psyr_2533 FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal -0.31
    2 Psyr_0500 biotin carboxyl carrier protein / biotin carboxylase -0.30
    3 Psyr_0961 deoxyribodipyrimidine photo-lyase type I -0.28
    4 Psyr_4370 methylpurine-DNA glycosylase family protein -0.28
    5 Psyr_3613 Glutathione peroxidase -0.28
    6 Psyr_1867 conserved hypothetical protein -0.28
    7 Psyr_4426 amino acid/amide ABC transporter substrate-binding protein, HAAT family -0.26
    8 Psyr_3624 transcriptional regulator, LysR family -0.26
    9 Psyr_0141 Binding-protein-dependent transport systems inner membrane component -0.25
    10 Psyr_2030 Calcium-binding EF-hand -0.25
    11 Psyr_2991 GCN5-related N-acetyltransferase -0.25
    12 Psyr_1440 DSBA oxidoreductase -0.25
    13 Psyr_3981 ribosomal small subunit pseudouridine synthase A -0.25
    14 Psyr_2718 Major royal jelly protein -0.25
    15 Psyr_2787 hypothetical protein -0.25
    16 Psyr_4612 Binding-protein-dependent transport systems inner membrane component -0.25
    17 Psyr_4233 PhcA -0.24
    18 Psyr_1146 Glycosyl transferase, family 2 -0.24
    19 Psyr_4495 Beta-lactamase -0.24
    20 Psyr_4600 Glycoside hydrolase, family 5 -0.23

    Or look for positive cofitness