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  • Negative cofitness for Psyr_2692 from Pseudomonas syringae pv. syringae B728a

    Polysaccharide deacetylase
    SEED: Polymyxin resistance protein PmrJ, predicted deacetylase
    KEGG: undecaprenyl phosphate-alpha-L-ara4FN deformylase

    Computing cofitness values with 193 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psyr_0487 glutathione synthase -0.51
    2 Psyr_0255 glutamate-cysteine ligase -0.43
    3 Psyr_4519 General substrate transporter:Major facilitator superfamily -0.43
    4 Psyr_2840 hypothetical protein -0.39
    5 Psyr_4850 Fumarylacetoacetate (FAA) hydrolase -0.39
    6 Psyr_2815 conserved hypothetical protein -0.38
    7 Psyr_2222 aminomethyltransferase -0.38
    8 Psyr_0838 Rieske [2Fe-2S] region -0.37
    9 Psyr_2960 Binding-protein-dependent transport systems inner membrane component -0.37
    10 Psyr_3766 hypothetical protein -0.36
    11 Psyr_0964 conserved hypothetical protein -0.36
    12 Psyr_2772 Fibronectin, type III -0.35
    13 Psyr_4259 ATP-dependent protease, putative -0.35
    14 Psyr_2771 conserved domain protein -0.34
    15 Psyr_3595 Metallophosphoesterase -0.34
    16 Psyr_4202 Sodium:neurotransmitter symporter -0.34
    17 Psyr_1188 type III effector protein AvrE1 -0.34
    18 Psyr_4271 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K -0.34
    19 Psyr_3384 lipoprotein, putative -0.34
    20 Psyr_1187 type III chaperone protein ShcE -0.33

    Or look for positive cofitness