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  • Negative cofitness for Psyr_2003 from Pseudomonas syringae pv. syringae B728a

    conserved hypothetical protein
    SEED: Collagenase and related proteases

    Computing cofitness values with 193 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psyr_4315 Asparagine synthase, glutamine-hydrolyzing -0.38
    2 Psyr_1889 type III effector HopH1 -0.37
    3 Psyr_1263 ATPase -0.37
    4 Psyr_3378 Fusaric acid resistance protein conserved region -0.37
    5 Psyr_1073 amino acid ABC transporter membrane protein 1, PAAT family -0.36
    6 Psyr_2061 SLT -0.35
    7 Psyr_4829 Substrate-binding region of ABC-type glycine betaine transport system -0.35
    8 Psyr_4660 Formate/nitrite transporter -0.34
    9 Psyr_4313 Beta-ketoacyl synthase:Beta-ketoacyl synthase:Phosphopantetheine-binding protein -0.34
    10 Psyr_2309 conserved hypothetical protein -0.34
    11 Psyr_4008 Hydrophobe/amphiphile efflux-1 HAE1 -0.34
    12 Psyr_2897 regulatory protein, LuxR:Response regulator receiver -0.33
    13 Psyr_4007 Secretion protein HlyD -0.32
    14 Psyr_2943 amino acid ABC transporter membrane protein 2, PAAT family -0.32
    15 Psyr_2206 amino acid/amide ABC transporter substrate-binding protein, HAAT family -0.32
    16 Psyr_0452 HylII -0.31
    17 Psyr_3123 type III effector HopAH2 -0.31
    18 Psyr_0303 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding protein -0.30
    19 Psyr_2124 Benzoate transport -0.30
    20 Psyr_1868 hypothetical protein -0.30

    Or look for positive cofitness