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  • Negative cofitness for Psyr_1936 from Pseudomonas syringae pv. syringae B728a

    tRNA-U16,U17-dihydrouridine synthase
    SEED: tRNA dihydrouridine synthase A
    KEGG: tRNA-dihydrouridine synthase A

    Computing cofitness values with 193 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psyr_0956 Cyclopropane-fatty-acyl-phospholipid synthase -0.44
    2 Psyr_3054 Choline/ethanolamine kinase:Aminoglycoside phosphotransferase -0.43
    3 Psyr_0892 Sigma-70 region 2:Sigma-70 region 4 -0.43
    4 Psyr_0750 conserved hypothetical protein -0.40
    5 Psyr_0863 PhnA protein -0.39
    6 Psyr_0188 Protein of unknown function UPF0047 -0.37
    7 Psyr_4314 Beta-ketoacyl synthase:Beta-ketoacyl synthase:Phosphopantetheine-binding protein -0.37
    8 Psyr_1442 conserved hypothetical protein -0.37
    9 Psyr_1862 Zinc transporter ZIP -0.36
    10 Psyr_2607 regulatory protein, LuxR -0.36
    11 Psyr_0862 Acyltransferase 3 -0.36
    12 Psyr_3776 Cytosine deaminase -0.36
    13 Psyr_1555 Cobyrinic acid a,c-diamide synthase -0.36
    14 Psyr_2869 xenobiotic compound monooxygenase, DszA family -0.36
    15 Psyr_3727 conserved hypothetical protein -0.36
    16 Psyr_0255 glutamate-cysteine ligase -0.35
    17 Psyr_2898 Helix-turn-helix motif protein -0.34
    18 Psyr_1467 conserved hypothetical protein -0.34
    19 Psyr_3740 Protein of unknown function DUF454 -0.34
    20 Psyr_2399 Binding-protein-dependent transport systems inner membrane component -0.34

    Or look for positive cofitness