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  • Negative cofitness for Psyr_0716 from Pseudomonas syringae pv. syringae B728a

    type IV pilus assembly protein PilV
    SEED: Type IV fimbrial biogenesis protein PilV
    KEGG: type IV pilus assembly protein PilV

    Computing cofitness values with 193 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Psyr_3116 transcriptional regulator, CdaR family -0.35
    2 Psyr_4410 conserved hypothetical protein -0.35
    3 Psyr_1970 Secretion protein HlyD -0.34
    4 Psyr_4959 conserved hypothetical protein -0.33
    5 Psyr_3490 conserved hypothetical protein -0.33
    6 Psyr_3531 Permease for cytosine/purines, uracil, thiamine, allantoin -0.32
    7 Psyr_2485 RND efflux system, outer membrane lipoprotein, NodT -0.32
    8 Psyr_1939 PAS -0.32
    9 Psyr_1965 Twin-arginine translocation pathway signal -0.32
    10 Psyr_1543 Peptidase M48, Ste24p -0.32
    11 Psyr_0043 conserved hypothetical protein -0.31
    12 Psyr_0544 hydroxymethylpyrimidine synthase -0.31
    13 Psyr_3376 lyase, putative -0.31
    14 Psyr_5116 hypothetical protein -0.30
    15 Psyr_2282 Hydrophobe/amphiphile efflux-1 HAE1 -0.30
    16 Psyr_5071 conserved hypothetical protein -0.30
    17 Psyr_0771 acetylornithine deacetylase -0.30
    18 Psyr_0338 ABC transporter -0.29
    19 Psyr_1265 hypothetical protein -0.29
    20 Psyr_1769 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal -0.29

    Or look for positive cofitness