Conservation of cofitness between Xcc-8004.4000.1 and Xcc-8004.1878.1 in Xanthomonas campestris pv. campestris strain 8004

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.4000.1 COG1399 protein, clustered with ribosomal protein L32p 1.0 Xcc-8004.1878.1 Protein of unknown function DUF541 0.34 16
Lysobacter sp. OAE881 0.67 ABIE51_RS13965 YceD family protein 0.49 ABIE51_RS06775 SIMPL domain-containing protein — —
Erwinia tracheiphila SCR3 0.22 LU632_RS14845 yceD 23S rRNA accumulation protein YceD 0.15 LU632_RS05840 oxidative stress defense protein low > 74
Erwinia tracheiphila HP pepo 2.2 0.22 IJEDHG_00705 yceD 23S rRNA accumulation protein YceD 0.15 IJEDHG_03335 oxidative stress defense protein — —
Escherichia coli ECOR27 0.21 NOLOHH_21130 yceD 23S rRNA accumulation protein YceD 0.14 NOLOHH_11325 yggE oxidative stress defense protein low > 76
Escherichia coli ECRC102 0.21 NIAGMN_24230 yceD 23S rRNA accumulation protein YceD 0.14 NIAGMN_17180 yggE oxidative stress defense protein low > 80
Escherichia coli ECRC62 0.21 BNILDI_19290 yceD 23S rRNA accumulation protein YceD 0.14 BNILDI_09860 yggE oxidative stress defense protein low > 75
Escherichia coli BW25113 0.21 b1088 yceD hypothetical protein (NCBI) 0.15 b2922 yggE hypothetical protein (NCBI) low > 76
Escherichia coli ECRC101 0.21 MCAODC_22960 yceD 23S rRNA accumulation protein YceD 0.14 MCAODC_09935 yggE oxidative stress defense protein low > 88
Escherichia coli ECRC99 0.21 KEDOAH_24155 yceD 23S rRNA accumulation protein YceD 0.14 KEDOAH_08725 yggE oxidative stress defense protein — —
Escherichia coli ECOR38 0.21 HEPCGN_23880 yceD 23S rRNA accumulation protein YceD 0.14 HEPCGN_18720 yggE oxidative stress defense protein low > 88
Escherichia coli BL21 0.21 ECD_01084 DUF177 family protein 0.15 ECD_02753 oxidative stress defense protein low > 61
Escherichia coli Nissle 1917 0.21 ECOLIN_RS06290 23S rRNA accumulation protein YceD 0.14 ECOLIN_RS16240 oxidative stress defense protein low > 55
Escherichia coli ECRC98 0.21 JDDGAC_07260 yceD 23S rRNA accumulation protein YceD 0.14 JDDGAC_23045 yggE oxidative stress defense protein low > 87
Escherichia coli ECRC100 0.21 OKFHMN_03600 yceD 23S rRNA accumulation protein YceD 0.14 OKFHMN_19415 yggE oxidative stress defense protein low > 79
Escherichia fergusonii Becca 0.21 EFB2_02887 Large ribosomal RNA subunit accumulation protein YceD 0.15 EFB2_00984 26 kDa periplasmic immunogenic protein low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.21 OHPLBJKB_02578 Large ribosomal RNA subunit accumulation protein YceD 0.15 OHPLBJKB_00794 26 kDa periplasmic immunogenic protein low > 74
Dickeya dianthicola 67-19 0.21 HGI48_RS13210 23S rRNA accumulation protein YceD 0.13 HGI48_RS18420 oxidative stress defense protein low > 71
Enterobacter sp. TBS_079 0.21 MPMX20_01768 Large ribosomal RNA subunit accumulation protein YceD 0.15 MPMX20_03774 26 kDa periplasmic immunogenic protein low > 85
Enterobacter asburiae PDN3 0.21 EX28DRAFT_1841 Predicted metal-binding, possibly nucleic acid-binding protein 0.16 EX28DRAFT_2968 Uncharacterized conserved protein low > 76
Dickeya dianthicola ME23 0.20 DZA65_RS13680 23S rRNA accumulation protein YceD 0.13 DZA65_RS19555 oxidative stress defense protein — —
Pectobacterium carotovorum WPP14 0.20 HER17_RS08625 23S rRNA accumulation protein YceD 0.16 HER17_RS02710 oxidative stress defense protein low > 75
Klebsiella michiganensis M5al 0.19 BWI76_RS11065 hypothetical protein 0.18 BWI76_RS23960 oxidative stress defense protein — —
Dickeya dadantii 3937 0.19 DDA3937_RS13145 23S rRNA accumulation protein YceD 0.14 DDA3937_RS18495 oxidative stress defense protein low > 74
Klebsiella pneumoniae MKP103 0.19 KDGMDA_18670 23S rRNA accumulation protein YceD 0.18 KDGMDA_04435 oxidative stress defense protein low > 95
Pantoea sp. MT58 0.18 IAI47_12095 23S rRNA accumulation protein YceD 0.16 IAI47_03710 oxidative stress defense protein — —
Pantoea agglomerans CFBP13505 P0401 0.18 PagCFBP13505_RS05240 23S rRNA accumulation protein YceD 0.16 PagCFBP13505_RS15990 oxidative stress defense protein low > 74
Serratia liquefaciens MT49 0.18 IAI46_09765 23S rRNA accumulation protein YceD 0.15 IAI46_20915 oxidative stress defense protein — —
Shewanella amazonensis SB2B 0.18 Sama_1985 hypothetical protein (RefSeq) 0.21 Sama_0486 hypothetical protein (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.17 CSW01_10120 23S rRNA accumulation protein YceD 0.20 CSW01_02565 oxidative stress defense protein — —

Not shown: 25 genomes with orthologs for Xcc-8004.4000.1 only; 12 genomes with orthologs for Xcc-8004.1878.1 only