Conservation of cofitness between Xcc-8004.3669.1 and Xcc-8004.1260.1 in Xanthomonas campestris pv. campestris strain 8004

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.3669.1 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) 1.0 Xcc-8004.1260.1 Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) / Adenylylsulfate kinase (EC 2.7.1.25) 0.30 7
Lysobacter sp. OAE881 0.70 ABIE51_RS13830 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.72 ABIE51_RS15815 sulfate adenylyltransferase subunit CysN low > 62
Rhodanobacter sp. FW510-T8 0.60 OKGIIK_07840 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.61 OKGIIK_01300 Multifunctional fusion protein low > 53
Dyella japonica UNC79MFTsu3.2 0.60 ABZR86_RS07120 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.60 ABZR86_RS18870 adenylyl-sulfate kinase low > 74
Rhodanobacter denitrificans MT42 0.60 LRK55_RS16715 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.61 LRK55_RS05285 adenylyl-sulfate kinase low > 63
Rhodanobacter denitrificans FW104-10B01 0.59 LRK54_RS17000 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.61 LRK54_RS05515 adenylyl-sulfate kinase low > 59
Rhodanobacter sp000427505 FW510-R12 0.59 LRK53_RS11940 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.61 LRK53_RS04490 adenylyl-sulfate kinase low > 59
Pseudomonas stutzeri RCH2 0.36 Psest_1639 23S rRNA (uracil-5-)-methyltransferase RumA 0.44 Psest_3293 sulfate adenylyltransferase, large subunit — —
Pseudomonas sp. DMC3 0.36 GFF4819 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.43 GFF1849 Bifunctional enzyme CysN/CysC 0.60 54
Pseudomonas fluorescens SBW25 0.35 PFLU_RS22100 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.42 PFLU_RS03770 sulfate adenylyltransferase subunit CysN low > 109
Pseudomonas lactucae CFBP13502 0.35 GEMAOFIL_04224 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.43 GEMAOFIL_00950 Bifunctional enzyme CysN/CysC low > 93
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS22100 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.42 PFLU_RS03770 sulfate adenylyltransferase subunit CysN low > 109
Pseudomonas aeruginosa PA14 0.35 IKLFDK_04195 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.43 IKLFDK_01880 sulfate adenylyltransferase subunit CysN low > 100
Pseudomonas simiae WCS417 0.35 PS417_20155 23S rRNA methyltransferase 0.42 PS417_03720 adenylylsulfate kinase — —
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_19055 23S rRNA methyltransferase 0.43 AO356_16670 adenylylsulfate kinase low > 104
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_3507 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 0.43 Pf1N1B4_1057 Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) / Adenylylsulfate kinase (EC 2.7.1.25) low > 87
Pseudomonas sp. S08-1 0.34 OH686_18955 23S rRNA (uracil-5-)-methyltransferase RumA 0.42 OH686_08445 Sulfate adenylyltransferase subunit 1 / Adenylylsulfate kinase — —
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_5722 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 0.43 Pf6N2E2_5258 Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) / Adenylylsulfate kinase (EC 2.7.1.25) 0.32 49
Pseudomonas segetis P6 0.33 MPMX49_01653 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.43 MPMX49_03839 Bifunctional enzyme CysN/CysC — —
Pseudomonas sp. RS175 0.33 PFR28_03224 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.43 PFR28_00194 Bifunctional enzyme CysN/CysC low > 88
Pseudomonas sp. SVBP6 0.32 COO64_RS07330 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.43 COO64_RS11735 cysN sulfate adenylyltransferase subunit CysN low > 93
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_02715 23S rRNA methyltransferase 0.43 AO353_05075 adenylylsulfate kinase low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.32 Psyr_3696 23S rRNA m(5)U-1939 methyltransferase 0.43 Psyr_4126 adenylylsulfate kinase / sulfate adenylyltransferase subunit 1 low > 86
Pseudomonas sp. BP01 0.32 JOY50_RS23905 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.43 JOY50_RS15270 cysN sulfate adenylyltransferase subunit CysN low > 84
Pseudomonas syringae pv. syringae B728a 0.32 Psyr_3696 23S rRNA m(5)U-1939 methyltransferase 0.43 Psyr_4126 adenylylsulfate kinase / sulfate adenylyltransferase subunit 1 low > 86
Pseudomonas putida KT2440 0.32 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.43 PP_1304 sulfate adenylyltransferase subunit 1/adenylyl-sulfate kinase low > 96
Pseudomonas fluorescens GW456-L13 0.31 PfGW456L13_2033 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 0.62 PfGW456L13_3615 Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) / Adenylylsulfate kinase (EC 2.7.1.25) low > 87
Xanthobacter sp. DMC5 0.15 GFF893 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.60 GFF4362 Bifunctional enzyme CysN/CysC — —
Rhodopseudomonas palustris CGA009 0.15 TX73_004885 methyltransferase 0.28 TX73_003890 adenylyl-sulfate kinase low > 86
Sinorhizobium meliloti 1021 0.13 SMc00974 RNA methyltransferase 0.57 SM_b21224 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase low > 103
Caulobacter crescentus NA1000 Δfur 0.13 CCNA_01387 tRNA (uracil-5-)-methyltransferase related protein 0.62 CCNA_01549 sulfate adenylyltransferase subunit 1/adenylylsulfate kinase low > 67
Caulobacter crescentus NA1000 0.13 CCNA_01387 tRNA (uracil-5-)-methyltransferase related protein 0.62 CCNA_01549 sulfate adenylyltransferase subunit 1/adenylylsulfate kinase low > 66
Sphingobium sp. HT1-2 0.13 GFF99 23S rRNA (uracil(1939)-C(5))-methyltransferase (EC 2.1.1.190) 0.62 GFF4916 Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) / Adenylylsulfate kinase (EC 2.7.1.25) low > 95
Magnetospirillum magneticum AMB-1 0.13 AMB_RS01660 class I SAM-dependent RNA methyltransferase 0.29 AMB_RS11200 adenylyl-sulfate kinase — —
Azospirillum brasilense Sp245 0.12 AZOBR_RS01195 RNA methyltransferase 0.50 AZOBR_RS33770 adenylyltransferase low > 97
Rhodospirillum rubrum S1H 0.11 Rru_A2107 23S rRNA (uracil-5-)-methyltransferase RumA (NCBI) 0.55 Rru_A2290 Sulfate adenylyltransferase, large subunit (NCBI) — —
Azospirillum sp. SherDot2 0.11 MPMX19_02196 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.59 MPMX19_06718 Bifunctional enzyme CysN/CysC low > 112
Brevundimonas sp. GW460-12-10-14-LB2 0.11 A4249_RS08425 class I SAM-dependent RNA methyltransferase 0.64 A4249_RS15300 sulfate adenylyltransferase subunit CysN low > 48
Sphingomonas koreensis DSMZ 15582 0.10 Ga0059261_0648 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 0.62 Ga0059261_4041 sulfate adenylyltransferase, large subunit low > 68

Not shown: 69 genomes with orthologs for Xcc-8004.3669.1 only; 2 genomes with orthologs for Xcc-8004.1260.1 only