Conservation of cofitness between Psyr_4404 and Psyr_4848 in Pseudomonas syringae pv. syringae B728a

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4404 tRNA-U20-dihydrouridine synthase 1.0 Psyr_4848 SdiA-regulated 0.41 8
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4404 tRNA-U20-dihydrouridine synthase 1.00 Psyr_4848 SdiA-regulated low > 86
Pseudomonas simiae WCS417 0.87 PS417_02950 tRNA-dihydrouridine synthase B 0.60 PS417_27020 DNA-binding protein low > 88
Pseudomonas fluorescens SBW25-INTG 0.87 PFLU_RS03025 tRNA dihydrouridine synthase DusB 0.59 PFLU_RS28675 SdiA-regulated domain-containing protein low > 109
Pseudomonas fluorescens SBW25 0.87 PFLU_RS03025 tRNA dihydrouridine synthase DusB 0.59 PFLU_RS28675 SdiA-regulated domain-containing protein low > 109
Pseudomonas fluorescens FW300-N2E3 0.86 AO353_13660 tRNA-dihydrouridine synthase B 0.55 AO353_08495 DNA-binding protein low > 101
Pseudomonas sp. DMC3 0.85 GFF3310 tRNA-dihydrouridine synthase B 0.56 GFF270 putative protein YjiK low > 89
Pseudomonas fluorescens FW300-N1B4 0.85 Pf1N1B4_1313 tRNA dihydrouridine synthase B (EC 1.-.-.-) 0.58 Pf1N1B4_2277 Outer membrane protein assembly factor YaeT precursor low > 87
Pseudomonas lactucae CFBP13502 0.85 GEMAOFIL_00822 tRNA-dihydrouridine synthase B 0.57 GEMAOFIL_05544 putative protein YjiK low > 93
Pseudomonas fluorescens GW456-L13 0.84 PfGW456L13_55 tRNA dihydrouridine synthase B (EC 1.-.-.-) 0.55 PfGW456L13_947 Outer membrane protein assembly factor YaeT precursor low > 87
Pseudomonas sp. RS175 0.84 PFR28_05216 tRNA-dihydrouridine synthase B 0.59 PFR28_04836 putative protein YjiK low > 88
Pseudomonas fluorescens FW300-N2C3 0.84 AO356_08215 tRNA-dihydrouridine synthase B 0.58 AO356_10320 DNA-binding protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.84 Pf6N2E2_3517 tRNA dihydrouridine synthase B (EC 1.-.-.-) 0.57 Pf6N2E2_3936 Outer membrane protein assembly factor YaeT precursor low > 103
Pseudomonas sp. SVBP6 0.83 COO64_RS18315 dusB tRNA dihydrouridine synthase DusB 0.57 COO64_RS12660 SdiA-regulated domain-containing protein low > 93
Pseudomonas sp. BP01 0.81 JOY50_RS17635 dusB tRNA dihydrouridine synthase DusB 0.57 JOY50_RS20635 SdiA-regulated domain-containing protein low > 84
Pseudomonas sp. S08-1 0.81 OH686_07610 tRNA-dihydrouridine synthase DusB 0.50 OH686_11340 Outer membrane protein low > 80
Pseudomonas stutzeri RCH2 0.81 Psest_1016 putative TIM-barrel protein, nifR3 family 0.47 Psest_3869 Uncharacterized protein conserved in bacteria low > 67
Pseudomonas putida KT2440 0.81 PP_4820 tRNA-dihydrouridine synthase B 0.56 PP_5151 conserved exported protein of unknown function low > 96
Pseudomonas segetis P6 0.80 MPMX49_04106 tRNA-dihydrouridine synthase B 0.48 MPMX49_00580 putative protein YjiK low > 75
Pseudomonas aeruginosa PA14 0.77 IKLFDK_29300 tRNA dihydrouridine synthase DusB 0.52 IKLFDK_23805 DNA-binding protein low > 100
Escherichia fergusonii Becca 0.56 EFB2_00564 tRNA-dihydrouridine synthase B 0.24 EFB2_04111 putative protein YjiK low > 86
Escherichia coli ECRC100 0.56 OKFHMN_17685 dusB tRNA dihydrouridine synthase DusB 0.23 OKFHMN_11495 yjiK Uncharacterized protein YjiK low > 79
Escherichia coli ECRC102 0.56 NIAGMN_15445 dusB tRNA dihydrouridine synthase DusB 0.23 NIAGMN_09345 yjiK Uncharacterized protein YjiK low > 80
Escherichia coli Nissle 1917 0.56 ECOLIN_RS18725 tRNA dihydrouridine synthase DusB 0.24 ECOLIN_RS24900 YjiK family protein low > 55
Escherichia coli ECRC101 0.56 MCAODC_08205 dusB tRNA dihydrouridine synthase DusB 0.23 MCAODC_02010 yjiK Uncharacterized protein YjiK low > 88
Escherichia coli BW25113 0.56 b3260 dusB tRNA-dihydrouridine synthase B (NCBI) 0.24 b4333 yjiK conserved protein (RefSeq) low > 76
Escherichia coli ECRC62 0.56 BNILDI_02050 dusB tRNA dihydrouridine synthase DusB 0.23 BNILDI_07765 yjiK Uncharacterized protein YjiK low > 75
Escherichia coli ECOR27 0.56 NOLOHH_09470 dusB tRNA dihydrouridine synthase DusB 0.23 NOLOHH_03830 yjiK Uncharacterized protein YjiK low > 76
Escherichia coli BL21 0.56 ECD_03118 tRNA-dihydrouridine synthase B 0.24 ECD_04202 SdiA-regulated family putative membrane-anchored protein; putative phytase-like esterase low > 61
Escherichia coli ECOR38 0.56 HEPCGN_16505 dusB tRNA dihydrouridine synthase DusB 0.25 HEPCGN_09505 yjiK Uncharacterized protein YjiK low > 88
Hydrogenophaga sp. GW460-11-11-14-LB1 0.53 GFF634 tRNA dihydrouridine synthase B (EC 1.-.-.-) 0.28 GFF5457 Outer membrane protein assembly factor YaeT precursor low > 90
Escherichia coli ECRC99 0.50 KEDOAH_10465 dusB tRNA dihydrouridine synthase DusB 0.23 KEDOAH_16650 yjiK Uncharacterized protein YjiK — —
Escherichia coli ECRC98 0.50 JDDGAC_21310 dusB tRNA dihydrouridine synthase DusB 0.23 JDDGAC_15090 yjiK Uncharacterized protein YjiK low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.49 OHPLBJKB_00445 putative tRNA-dihydrouridine synthase 0.24 OHPLBJKB_03733 putative protein YjiK low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.48 GFF2124 tRNA dihydrouridine synthase B (EC 1.-.-.-) 0.22 GFF1488 Putative inner membrane protein low > 78

Not shown: 77 genomes with orthologs for Psyr_4404 only; 0 genomes with orthologs for Psyr_4848 only