| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas syringae pv. syringae B728a | 1.0 | Psyr_3878 | | amino acid ABC transporter ATP-binding protein, PAAT family | 1.0 | Psyr_3742 | | FAD dependent oxidoreductase:Protein of unknown function DUF752 | 0.53 | 4 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 1.00 | Psyr_3878 | | amino acid ABC transporter ATP-binding protein, PAAT family | 1.00 | Psyr_3742 | | FAD dependent oxidoreductase:Protein of unknown function DUF752 | low | > 86 |
| Pseudomonas fluorescens FW300-N1B4 | 0.87 | Pf1N1B4_3175 | | Histidine ABC transporter, ATP-binding protein HisP (TC 3.A.1.3.1) | 0.74 | Pf1N1B4_373 | | 5-methylaminomethyl-2-thiouridine-forming enzyme mnmC | — | — |
| Pseudomonas sp. DMC3 | 0.87 | GFF2143 | | Histidine transport ATP-binding protein HisP | 0.75 | GFF4698 | | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | low | > 89 |
| Pseudomonas simiae WCS417 | 0.86 | PS417_06395 | | amino acid transporter | 0.73 | PS417_19225 | | FAD-dependent cmnm(5)s(2)U34 oxidoreductase | low | > 88 |
| Pseudomonas sp. RS175 | 0.86 | PFR28_00503 | | Histidine transport ATP-binding protein HisP | 0.73 | PFR28_00884 | | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | low | > 88 |
| Pseudomonas orientalis W4I3 | 0.86 | QF045_RS09240 | | ATP-binding cassette domain-containing protein | 0.71 | QF045_RS21225 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | low | > 93 |
| Pseudomonas lactucae CFBP13502 | 0.86 | GEMAOFIL_01449 | | Histidine transport ATP-binding protein HisP | 0.73 | GEMAOFIL_02096 | | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | low | > 96 |
| Pseudomonas fluorescens SBW25-INTG | 0.86 | PFLU_RS06460 | | ATP-binding cassette domain-containing protein | 0.72 | PFLU_RS21190 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | low | > 109 |
| Pseudomonas fluorescens GW456-L13 | 0.86 | PfGW456L13_4639 | | Histidine ABC transporter, ATP-binding protein HisP (TC 3.A.1.3.1) | 0.74 | PfGW456L13_2155 | | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase | low | > 87 |
| Pseudomonas fluorescens SBW25 | 0.86 | PFLU_RS06460 | | ATP-binding cassette domain-containing protein | 0.72 | PFLU_RS21190 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | low | > 109 |
| Pseudomonas fluorescens FW300-N2C3 | 0.85 | AO356_05515 | | ABC transporter for L-Lysine, ATPase component (from data) | 0.74 | AO356_03570 | | FAD-dependent cmnm(5)s(2)U34 oxidoreductase | 0.30 | 65 |
| Pseudomonas fluorescens FW300-N2E3 | 0.85 | AO353_16950 | | amino acid transporter | 0.75 | AO353_02165 | | FAD-dependent cmnm(5)s(2)U34 oxidoreductase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.85 | Pf6N2E2_2962 | | ABC transporter for L-Lysine, ATPase component (from data) | 0.75 | Pf6N2E2_2541 | | 5-methylaminomethyl-2-thiouridine-forming enzyme mnmC | low | > 103 |
| Pseudomonas sp. SVBP6 | 0.84 | COO64_RS16940 | | ABC transporter ATP-binding protein | 0.71 | COO64_RS06835 | mnmC | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | low | > 93 |
| Burkholderia phytofirmans PsJN | 0.73 | BPHYT_RS05495 | | histidine ABC transporter ATP-binding protein | 0.28 | BPHYT_RS19575 | | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | — | — |
| Acinetobacter baumannii LAC-4 | 0.73 | RR41_RS06095 | | ATP-binding cassette domain-containing protein | 0.23 | RR41_RS02870 | | FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | low | > 55 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.72 | H281DRAFT_00221 | | amino acid ABC transporter ATP-binding protein, PAAT family | 0.28 | H281DRAFT_02360 | | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.72 | RR42_RS29660 | | amino acid transporter | 0.20 | RR42_RS09010 | | FAD-dependent cmnm(5)s(2)U34 oxidoreductase | low | > 128 |
| Paraburkholderia sabiae LMG 24235 | 0.72 | QEN71_RS24880 | | ATP-binding cassette domain-containing protein | 0.27 | QEN71_RS29485 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | low | > 153 |
| Paraburkholderia graminis OAS925 | 0.72 | ABIE53_001348 | | histidine transport system ATP-binding protein | 0.28 | ABIE53_000291 | | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein | low | > 113 |
| Castellaniella sp019104865 MT123 | 0.69 | ABCV34_RS02170 | | ATP-binding cassette domain-containing protein | 0.16 | ABCV34_RS09580 | | FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | low | > 48 |
| Enterobacter asburiae PDN3 | 0.66 | EX28DRAFT_0298 | | ABC-type histidine transport system, ATPase component | 0.31 | EX28DRAFT_0280 | | tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain | low | > 76 |
| Klebsiella michiganensis M5al | 0.66 | BWI76_RS20320 | | histidine/lysine/arginine/ornithine ABC transporter ATP-binding protein HisP | 0.30 | BWI76_RS20410 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | low | > 92 |
| Enterobacter sp. TBS_079 | 0.66 | MPMX20_03241 | | Histidine transport ATP-binding protein HisP | 0.30 | MPMX20_03259 | | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | low | > 85 |
| Escherichia coli ECOR38 | 0.65 | HEPCGN_21940 | hisP | histidine ABC transporter ATP-binding protein HisP | 0.32 | HEPCGN_21845 | mnmC | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | low | > 88 |
| Klebsiella pneumoniae MKP103 | 0.65 | KDGMDA_27155 | | histidine ABC transporter ATP-binding protein HisP | 0.30 | KDGMDA_27245 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | low | > 95 |
| Rahnella sp. WP5 | 0.65 | EX31_RS19545 | | histidine ABC transporter ATP-binding protein HisP | 0.30 | EX31_RS19660 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | low | > 89 |
| Escherichia coli ECOR27 | 0.65 | NOLOHH_14365 | hisP | histidine ABC transporter ATP-binding protein HisP | 0.32 | NOLOHH_14275 | mnmC | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | low | > 76 |
| Escherichia coli ECRC101 | 0.65 | MCAODC_13785 | hisP | histidine ABC transporter ATP-binding protein HisP | 0.32 | MCAODC_13680 | mnmC | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | low | > 87 |
| Escherichia coli ECRC62 | 0.65 | BNILDI_13285 | hisP | histidine ABC transporter ATP-binding protein HisP | 0.32 | BNILDI_13195 | mnmC | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.65 | OHPLBJKB_01399 | | Histidine transport ATP-binding protein HisP | 0.32 | OHPLBJKB_01381 | | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | low | > 74 |
| Escherichia coli ECRC100 | 0.65 | OKFHMN_22745 | hisP | histidine ABC transporter ATP-binding protein HisP | 0.32 | OKFHMN_22640 | mnmC | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | low | > 79 |
| Escherichia coli ECRC98 | 0.65 | JDDGAC_26705 | hisP | histidine ABC transporter ATP-binding protein HisP | 0.32 | JDDGAC_26600 | mnmC | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | low | > 87 |
| Escherichia coli ECRC102 | 0.65 | NIAGMN_20515 | hisP | histidine ABC transporter ATP-binding protein HisP | 0.32 | NIAGMN_20415 | mnmC | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | low | > 80 |
| Escherichia coli Nissle 1917 | 0.65 | ECOLIN_RS13375 | | histidine ABC transporter ATP-binding protein HisP | 0.31 | ECOLIN_RS13465 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | low | > 55 |
| Escherichia coli ECRC99 | 0.65 | KEDOAH_05450 | hisP | histidine ABC transporter ATP-binding protein HisP | 0.32 | KEDOAH_05555 | mnmC | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | — | — |
| Escherichia fergusonii Becca | 0.65 | EFB2_01552 | | Histidine transport ATP-binding protein HisP | 0.31 | EFB2_01534 | | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC | low | > 86 |
| Serratia liquefaciens MT49 | 0.65 | IAI46_17785 | | histidine ABC transporter ATP-binding protein HisP | 0.29 | IAI46_18000 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | low | > 87 |
| Escherichia coli BL21 | 0.65 | ECD_02231 | | histidine ABC transporter ATPase | 0.32 | ECD_02249 | | fused 5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase and FAD-dependent demodification enzyme | low | > 61 |
| Escherichia coli BW25113 | 0.65 | b2306 | hisP | histidine/lysine/arginine/ornithine transporter subunit (NCBI) | 0.32 | b2324 | b2324 | putative peptidase (VIMSS) | low | > 76 |
| Pantoea sp. MT58 | 0.65 | IAI47_06300 | | histidine ABC transporter ATP-binding protein HisP | 0.32 | IAI47_06175 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.65 | GFF1915 | | Histidine ABC transporter, ATP-binding protein HisP (TC 3.A.1.3.1) | 0.31 | GFF1945 | | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase | low | > 78 |
| Pantoea agglomerans CFBP13505 P0401 | 0.64 | PagCFBP13505_RS00255 | | histidine ABC transporter ATP-binding protein HisP | 0.33 | PagCFBP13505_RS00130 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | low | > 74 |
| Pseudomonas aeruginosa PA14 | 0.64 | IKLFDK_14865 | | Histidine transport ATP-binding protein HisP | 0.62 | IKLFDK_17740 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | — | — |
| Pseudomonas aeruginosa PUPa3 | 0.64 | DQ20_RS33230 | | ABC transporter ATP-binding protein | 0.62 | DQ20_RS41435 | mnmC;go_function=tRNA | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | low | > 101 |
| Erwinia amylovora T8 | 0.63 | OLJFJH_11305 | | histidine ABC transporter ATP-binding protein HisP | 0.30 | OLJFJH_11180 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | low | > 58 |
| Dickeya dadantii 3937 | 0.61 | DDA3937_RS14410 | | histidine ABC transporter ATP-binding protein HisP | 0.29 | DDA3937_RS14515 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | low | > 74 |
| Pectobacterium carotovorum WPP14 | 0.61 | HER17_RS07045 | | histidine ABC transporter ATP-binding protein HisP | 0.28 | HER17_RS06960 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | low | > 75 |
| Dickeya dianthicola 67-19 | 0.60 | HGI48_RS14380 | | histidine ABC transporter ATP-binding protein HisP | 0.29 | HGI48_RS14485 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | low | > 71 |
| Dickeya dianthicola ME23 | 0.60 | DZA65_RS15310 | | histidine ABC transporter ATP-binding protein HisP | 0.29 | DZA65_RS15420 | | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | low | > 75 |
Not shown: 2 genomes with orthologs for Psyr_3878 only; 29 genomes with orthologs for Psyr_3742 only