| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas syringae pv. syringae B728a | 1.0 | Psyr_1974 | | Excinuclease ABC subunit B | 1.0 | Psyr_0783 | | MCP methyltransferase, CheR-type | 0.32 | 15 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 1.00 | Psyr_1974 | | Excinuclease ABC subunit B | 1.00 | Psyr_0783 | | MCP methyltransferase, CheR-type | low | > 86 |
| Pseudomonas fluorescens FW300-N2E2 | 0.96 | Pf6N2E2_52 | | Excinuclease ABC subunit B | 0.85 | Pf6N2E2_415 | | Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.96 | AO356_21335 | | excinuclease ABC subunit B | 0.85 | AO356_22655 | | SAM-dependent methyltransferase | low | > 104 |
| Pseudomonas fluorescens SBW25-INTG | 0.96 | PFLU_RS20655 | | excinuclease ABC subunit B | 0.85 | PFLU_RS24975 | | SAM-dependent methyltransferase | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.96 | PFLU_RS20655 | | excinuclease ABC subunit B | 0.85 | PFLU_RS24975 | | SAM-dependent methyltransferase | low | > 109 |
| Pseudomonas sp. RS175 | 0.95 | PFR28_02837 | | UvrABC system protein B | 0.85 | PFR28_02515 | | Chemotaxis protein methyltransferase | low | > 88 |
| Pseudomonas lactucae CFBP13502 | 0.95 | GEMAOFIL_03964 | | UvrABC system protein B | 0.86 | GEMAOFIL_03219 | | Chemotaxis protein methyltransferase | low | > 96 |
| Pseudomonas sp. SVBP6 | 0.92 | COO64_RS05730 | uvrB | excinuclease ABC subunit UvrB | 0.34 | COO64_RS00645 | | protein-glutamate O-methyltransferase CheR | low | > 93 |
| Pseudomonas stutzeri RCH2 | 0.90 | Psest_1296 | | excinuclease ABC, B subunit | 0.43 | Psest_0654 | | Methylase of chemotaxis methyl-accepting proteins | low | > 67 |
| Pseudomonas sp. S08-1 | 0.88 | OH686_04580 | | excinuclease ABC subunit B | 0.43 | OH686_21845 | | Chemotaxis protein methyltransferase CheR | low | > 80 |
| Pseudomonas aeruginosa PA14 | 0.87 | IKLFDK_15985 | | excinuclease ABC subunit UvrB | 0.33 | IKLFDK_24670 | | Chemotaxis protein methyltransferase 2 | low | > 98 |
| Pseudomonas aeruginosa MRSN321 | 0.87 | DY961_RS01215 | uvrB;go_component=excinuclease | excinuclease ABC subunit UvrB | 0.33 | DY961_RS27160 | | CheR family methyltransferase | low | > 100 |
| Pseudomonas aeruginosa PUPa3 | 0.87 | DQ20_RS34340 | uvrB;go_component=excinuclease | excinuclease ABC subunit UvrB | 0.33 | DQ20_RS31690 | | CheR family methyltransferase | low | > 101 |
| Serratia liquefaciens MT49 | 0.74 | IAI46_06550 | | excinuclease ABC subunit B | 0.30 | IAI46_16020 | | protein-glutamate O-methyltransferase CheR | low | > 87 |
| Pectobacterium carotovorum WPP14 | 0.73 | HER17_RS13420 | | excinuclease ABC subunit B | 0.31 | HER17_RS08115 | | protein-glutamate O-methyltransferase CheR | low | > 75 |
| Vibrio cholerae E7946 ATCC 55056 | 0.73 | CSW01_05185 | | excinuclease ABC subunit UvrB | 0.29 | CSW01_19530 | | Chemotaxis protein methyltransferase 3 | low | > 62 |
| Rahnella sp. WP5 | 0.72 | EX31_RS23720 | | excinuclease ABC subunit B | 0.33 | EX31_RS11365 | | protein-glutamate O-methyltransferase CheR | low | > 89 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.72 | Xcc-8004.2034.1 | | Excinuclease ABC subunit B | 0.54 | Xcc-8004.1769.1 | | Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) | low | > 74 |
| Dickeya dianthicola ME23 | 0.72 | DZA65_RS08990 | | excinuclease ABC subunit B | 0.30 | DZA65_RS14060 | | protein-glutamate O-methyltransferase CheR | 0.67 | 70 |
| Erwinia tracheiphila HP pepo 2.2 | 0.72 | IJEDHG_19590 | uvrB | excinuclease ABC subunit UvrB | 0.35 | IJEDHG_22015 | cheR | protein-glutamate O-methyltransferase CheR | low | > 61 |
| Erwinia tracheiphila SCR3 | 0.72 | LU632_RS09160 | uvrB | excinuclease ABC subunit B | 0.35 | LU632_RS13530 | cheR | protein-glutamate O-methyltransferase CheR | low | > 73 |
| Dickeya dianthicola 67-19 | 0.72 | HGI48_RS08695 | | excinuclease ABC subunit B | 0.30 | HGI48_RS13575 | | protein-glutamate O-methyltransferase CheR | low | > 71 |
| Dickeya dadantii 3937 | 0.72 | DDA3937_RS08530 | | excinuclease ABC subunit B | 0.30 | DDA3937_RS13530 | | protein-glutamate O-methyltransferase CheR | low | > 74 |
| Shewanella oneidensis MR-1 | 0.71 | SO2506 | uvrB | excinuclease ABC, B subunit (NCBI ptt file) | 0.47 | SO2325 | cheR-3 | chemotaxis protein methyltransferase CheR (NCBI ptt file) | low | > 76 |
| Shewanella loihica PV-4 | 0.71 | Shew_2064 | | excinuclease ABC subunit B (RefSeq) | 0.31 | Shew_0110 | | MCP methyltransferase, CheR-type (RefSeq) | low | > 60 |
| Erwinia amylovora T8 | 0.71 | OLJFJH_16735 | | excinuclease ABC subunit UvrB | 0.35 | OLJFJH_12755 | | protein-glutamate O-methyltransferase CheR | low | > 58 |
| Pantoea agglomerans CFBP13505 P0401 | 0.71 | PagCFBP13505_RS03805 | | excinuclease ABC subunit B | 0.35 | PagCFBP13505_RS02205 | | protein-glutamate O-methyltransferase CheR | low | > 74 |
| Shewanella sp. ANA-3 | 0.71 | Shewana3_2166 | | excinuclease ABC subunit B (RefSeq) | 0.33 | Shewana3_2215 | | MCP methyltransferase, CheR-type (RefSeq) | low | > 73 |
| Enterobacter sp. TBS_079 | 0.71 | MPMX20_01408 | | UvrABC system protein B | 0.35 | MPMX20_02788 | | Chemotaxis protein methyltransferase | low | > 85 |
| Enterobacter asburiae PDN3 | 0.71 | EX28DRAFT_2211 | | Excinuclease ABC subunit B | 0.35 | EX28DRAFT_0672 | | Methylase of chemotaxis methyl-accepting proteins | low | > 76 |
| Escherichia coli Nissle 1917 | 0.71 | ECOLIN_RS04150 | | excinuclease ABC subunit UvrB | 0.36 | ECOLIN_RS10760 | | protein-glutamate O-methyltransferase CheR | — | — |
| Pantoea sp. MT58 | 0.71 | IAI47_13505 | | excinuclease ABC subunit B | 0.35 | IAI47_08325 | | protein-glutamate O-methyltransferase CheR | low | > 76 |
| Escherichia coli ECRC62 | 0.71 | BNILDI_21020 | uvrB | excinuclease ABC subunit UvrB | 0.36 | BNILDI_15375 | cheR | protein-glutamate O-methyltransferase CheR | low | > 75 |
| Escherichia coli ECOR27 | 0.71 | NOLOHH_22750 | uvrB | excinuclease ABC subunit UvrB | 0.36 | NOLOHH_16585 | cheR | protein-glutamate O-methyltransferase CheR | low | > 76 |
| Escherichia coli ECRC101 | 0.71 | MCAODC_25595 | uvrB | excinuclease ABC subunit UvrB | 0.36 | MCAODC_19260 | cheR | protein-glutamate O-methyltransferase CheR | low | > 87 |
| Escherichia coli ECRC98 | 0.71 | JDDGAC_10015 | uvrB | excinuclease ABC subunit UvrB | 0.36 | JDDGAC_00720 | cheR | protein-glutamate O-methyltransferase CheR | low | > 87 |
| Escherichia coli BW25113 | 0.71 | b0779 | uvrB | excinuclease ABC subunit B (NCBI) | 0.36 | b1884 | cheR | chemotaxis regulator, protein-glutamate methyltransferase (NCBI) | low | > 76 |
| Escherichia coli ECRC102 | 0.71 | NIAGMN_04425 | uvrB | excinuclease ABC subunit UvrB | 0.36 | NIAGMN_01915 | cheR | protein-glutamate O-methyltransferase CheR | low | > 80 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.71 | OHPLBJKB_02934 | | UvrABC system protein B | 0.36 | OHPLBJKB_01844 | | Chemotaxis protein methyltransferase | low | > 74 |
| Escherichia coli BL21 | 0.71 | ECD_00746 | | exision nuclease of nucleotide excision repair, DNA damage recognition component | 0.36 | ECD_01855 | | chemotaxis regulator, protein-glutamate methyltransferase | — | — |
| Escherichia coli ECRC99 | 0.71 | KEDOAH_21530 | uvrB | excinuclease ABC subunit UvrB | 0.36 | KEDOAH_01960 | cheR | protein-glutamate O-methyltransferase CheR | — | — |
| Escherichia coli ECRC100 | 0.71 | OKFHMN_06380 | uvrB | excinuclease ABC subunit UvrB | 0.36 | OKFHMN_26145 | cheR | protein-glutamate O-methyltransferase CheR | low | > 79 |
| Escherichia fergusonii Becca | 0.70 | EFB2_03326 | | UvrABC system protein B | 0.36 | EFB2_02059 | | Chemotaxis protein methyltransferase | low | > 86 |
| Escherichia coli ECOR38 | 0.70 | HEPCGN_01660 | uvrB | excinuclease ABC subunit UvrB | 0.36 | HEPCGN_04565 | cheR | protein-glutamate O-methyltransferase CheR | low | > 88 |
| Lysobacter sp. OAE881 | 0.70 | ABIE51_RS15310 | | excinuclease ABC subunit UvrB | 0.30 | ABIE51_RS16950 | | CheR family methyltransferase | low | > 62 |
| Dyella japonica UNC79MFTsu3.2 | 0.70 | ABZR86_RS09750 | | excinuclease ABC subunit UvrB | 0.29 | ABZR86_RS22215 | | protein-glutamate O-methyltransferase CheR | low | > 74 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.70 | GFF675 | | Excinuclease ABC subunit B | 0.36 | GFF1665 | | Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) | low | > 78 |
| Shewanella amazonensis SB2B | 0.70 | Sama_1828 | | excinuclease ABC subunit B (RefSeq) | 0.29 | Sama_3498 | | protein-glutamate O-methyltransferase (RefSeq) | low | > 62 |
| Rhodanobacter denitrificans MT42 | 0.70 | LRK55_RS13955 | | excinuclease ABC subunit UvrB | 0.34 | LRK55_RS13400 | | protein-glutamate O-methyltransferase | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.70 | LRK54_RS14235 | | excinuclease ABC subunit UvrB | 0.34 | LRK54_RS13660 | | protein-glutamate O-methyltransferase | low | > 59 |
| Dechlorosoma suillum PS | 0.69 | Dsui_2434 | | excinuclease ABC, B subunit | 0.63 | Dsui_1434 | | methylase of chemotaxis methyl-accepting protein | low | > 51 |
| Cupriavidus basilensis FW507-4G11 | 0.69 | RR42_RS05995 | | excinuclease ABC subunit B | 0.33 | RR42_RS35795 | | chemotaxis protein CheR | low | > 128 |
| Rhodanobacter sp000427505 FW510-R12 | 0.69 | LRK53_RS14375 | | excinuclease ABC subunit UvrB | 0.34 | LRK53_RS14915 | | protein-glutamate O-methyltransferase | low | > 59 |
| Rhodanobacter sp. FW510-T8 | 0.69 | OKGIIK_03100 | uvrB | excinuclease ABC subunit UvrB | 0.31 | OKGIIK_02905 | | Chemotaxis protein methyltransferase | low | > 53 |
| Ralstonia sp. UNC404CL21Col | 0.69 | ABZR87_RS09940 | | excinuclease ABC subunit UvrB | 0.33 | ABZR87_RS17980 | | CheR family methyltransferase | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.68 | RPSI07_RS19240 | | excinuclease ABC subunit UvrB | 0.34 | RPSI07_RS06240 | | chemotaxis protein CheR | low | > 81 |
| Ralstonia solanacearum IBSBF1503 | 0.68 | RALBFv3_RS14225 | | excinuclease ABC subunit UvrB | 0.33 | RALBFv3_RS17405 | | chemotaxis protein CheR | low | > 76 |
| Ralstonia solanacearum UW163 | 0.68 | UW163_RS11690 | | excinuclease ABC subunit UvrB | 0.33 | UW163_RS21745 | | chemotaxis protein CheR | — | — |
| Ralstonia solanacearum GMI1000 | 0.67 | RS_RS05005 | | UvrABC system protein B | 0.33 | RS_RS23905 | | chemotaxis protein CheR | low | > 80 |
| Paraburkholderia graminis OAS925 | 0.67 | ABIE53_001645 | | excinuclease ABC subunit B | 0.29 | ABIE53_000121 | | chemotaxis protein methyltransferase CheR | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.67 | H281DRAFT_04973 | | Excinuclease ABC subunit B | 0.28 | H281DRAFT_05745 | | MCP methyltransferase, CheR-type | low | > 103 |
| Burkholderia phytofirmans PsJN | 0.67 | BPHYT_RS06905 | | excinuclease ABC subunit B | 0.31 | BPHYT_RS18980 | | chemotaxis protein CheR | low | > 109 |
| Castellaniella sp019104865 MT123 | 0.66 | ABCV34_RS05110 | | excinuclease ABC subunit UvrB | 0.29 | ABCV34_RS05820 | | CheR family methyltransferase | low | > 48 |
| Paraburkholderia sabiae LMG 24235 | 0.66 | QEN71_RS23870 | | excinuclease ABC subunit UvrB | 0.28 | QEN71_RS28995 | | CheR family methyltransferase | low | > 153 |
| Methylophilus sp. DMC18 | 0.66 | GFF1123 | | UvrABC system protein B | 0.59 | GFF184 | | Chemotaxis protein methyltransferase | low | > 43 |
| Herbaspirillum seropedicae SmR1 | 0.66 | HSERO_RS15840 | | excinuclease ABC subunit B | 0.46 | HSERO_RS03125 | | SAM-dependent methyltransferase | low | > 78 |
| Acidovorax sp. GW101-3H11 | 0.65 | Ac3H11_4114 | | Excinuclease ABC subunit B | 0.29 | Ac3H11_1423 | | Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) | low | > 79 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.65 | GFF4962 | | Excinuclease ABC subunit B | 0.30 | GFF1477 | | Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) | low | > 90 |
| Variovorax sp. SCN45 | 0.65 | GFF945 | | Excinuclease ABC subunit B | 0.30 | GFF5765 | | Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) | low | > 127 |
| Azospirillum brasilense Sp245 | 0.62 | AZOBR_RS16420 | | excinuclease ABC subunit B | 0.29 | AZOBR_RS14250 | | chemotaxis protein | low | > 97 |
| Caulobacter crescentus NA1000 | 0.60 | CCNA_03076 | | excinuclease ABC subunit B | 0.31 | CCNA_00444 | | chemotaxis protein methyltransferase | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.60 | CCNA_03076 | | excinuclease ABC subunit B | 0.31 | CCNA_00444 | | chemotaxis protein methyltransferase | low | > 67 |
| Azospirillum sp. SherDot2 | 0.60 | MPMX19_01038 | | UvrABC system protein B | 0.29 | MPMX19_06747 | | Chemotaxis protein methyltransferase | low | > 112 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.59 | A4249_RS00555 | | excinuclease ABC subunit UvrB | 0.29 | A4249_RS15575 | | protein-glutamate O-methyltransferase | low | > 48 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.59 | DVU1605 | uvrB | excinuclease ABC, B subunit (TIGR) | 0.34 | DVU1595 | cheR-1 | chemotaxis protein methyltransferase (TIGR) | low | > 55 |
| Phaeobacter inhibens DSM 17395 | 0.59 | PGA1_c26160 | | uvrABC system protein B | 0.30 | PGA1_262p02100 | | methyltransferase, cheR type | low | > 62 |
| Rhodospirillum rubrum S1H | 0.59 | Rru_A1133 | | Excinuclease ABC, B subunit (NCBI) | 0.30 | Rru_A1405 | | MCP methyltransferase, CheR-type (NCBI) | low | > 58 |
| Desulfovibrio vulgaris Miyazaki F | 0.59 | DvMF_0454 | | excinuclease ABC subunit B (RefSeq) | 0.30 | DvMF_0466 | | MCP methyltransferase, CheR-type (RefSeq) | low | > 51 |
| Sphingomonas koreensis DSMZ 15582 | 0.58 | Ga0059261_3779 | | Excinuclease ABC subunit B | 0.30 | Ga0059261_1083 | | Methylase of chemotaxis methyl-accepting proteins | low | > 68 |
Not shown: 38 genomes with orthologs for Psyr_1974 only; 4 genomes with orthologs for Psyr_0783 only