| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
| Pseudomonas syringae pv. syringae B728a | 1.0 | Psyr_4757 | | transcriptional regulator, TetR family | 1.0 | Psyr_0561 | | chemotaxis motA protein | 0.45 | 10 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 1.00 | Psyr_4757 | | transcriptional regulator, TetR family | 1.00 | Psyr_0561 | | chemotaxis motA protein | low | > 86 |
| Pseudomonas fluorescens GW456-L13 | 0.70 | PfGW456L13_986 | | Transcriptional regulator, TetR family | 0.91 | PfGW456L13_168 | | Flagellar motor rotation protein MotA | low | > 87 |
| Pseudomonas sp. SVBP6 | 0.70 | COO64_RS12870 | | TetR/AcrR family transcriptional regulator | 0.91 | COO64_RS17840 | motA | flagellar motor stator protein MotA | low | > 93 |
| Pseudomonas fluorescens FW300-N2E3 | 0.69 | AO353_08285 | | TetR family transcriptional regulator | 0.90 | AO353_13090 | | flagellar motor stator protein MotA | low | > 101 |
| Pseudomonas fluorescens SBW25-INTG | 0.69 | PFLU_RS28485 | | TetR/AcrR family transcriptional regulator | 0.93 | PFLU_RS02510 | | flagellar motor stator protein MotA | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.69 | PFLU_RS28485 | | TetR/AcrR family transcriptional regulator | 0.93 | PFLU_RS02510 | | flagellar motor stator protein MotA | 0.49 | 59 |
| Pseudomonas sp. DMC3 | 0.69 | GFF232 | | hypothetical protein | 0.92 | GFF3201 | | Motility protein A | low | > 89 |
| Pseudomonas simiae WCS417 | 0.69 | PS417_26840 | | TetR family transcriptional regulator | 0.93 | PS417_02435 | | flagellar motor protein MotA | low | > 88 |
| Pseudomonas fluorescens FW300-N1B4 | 0.69 | Pf1N1B4_2316 | | Transcriptional regulator, TetR family | 0.89 | Pf1N1B4_1429 | | Flagellar motor rotation protein MotA | low | > 87 |
| Pseudomonas lactucae CFBP13502 | 0.69 | GEMAOFIL_05505 | | hypothetical protein | 0.93 | GEMAOFIL_00724 | | Motility protein A | 0.64 | 10 |
| Pseudomonas sp. RS175 | 0.68 | PFR28_04265 | | hypothetical protein | 0.91 | PFR28_05110 | | Motility protein A | low | > 88 |
| Pseudomonas fluorescens FW300-N2C3 | 0.68 | AO356_13305 | | TetR family transcriptional regulator | 0.91 | AO356_08710 | | flagellar motor stator protein MotA | low | > 104 |
| Pseudomonas orientalis W4I3 | 0.68 | QF045_RS01240 | | TetR/AcrR family transcriptional regulator | 0.92 | QF045_RS05495 | | flagellar motor stator protein MotA | low | > 93 |
| Pseudomonas putida KT2440 | 0.68 | PP_5119 | | Transcriptional regulator, TetR family | 0.91 | PP_4905 | | Flagellar motor rotation protein | low | > 96 |
| Pseudomonas sp. BP01 | 0.67 | JOY50_RS20790 | | TetR/AcrR family transcriptional regulator | 0.92 | JOY50_RS17175 | motA | flagellar motor stator protein MotA | low | > 84 |
| Pseudomonas fluorescens FW300-N2E2 | 0.65 | Pf6N2E2_4576 | | Transcriptional regulator, TetR family | 0.90 | Pf6N2E2_3625 | | Flagellar motor rotation protein MotA | low | > 103 |
| Pseudomonas aeruginosa MRSN321 | 0.62 | DY961_RS21805 | | TetR/AcrR family transcriptional regulator | 0.82 | DY961_RS10560 | motA;inference=COORDINATES | flagellar motor stator protein MotA | low | > 100 |
| Pseudomonas aeruginosa PUPa3 | 0.62 | DQ20_RS37490 | | TetR/AcrR family transcriptional regulator | 0.82 | DQ20_RS51495 | motA;inference=COORDINATES | flagellar motor stator protein MotA | low | > 101 |
| Pseudomonas sp. S08-1 | 0.62 | OH686_14175 | | Transcriptional regulator, AcrR family | 0.79 | OH686_09525 | | flagellar motor stator protein MotA | 0.64 | 71 |
| Pseudomonas aeruginosa PA14 | 0.62 | IKLFDK_23595 | | TetR family transcriptional regulator | 0.82 | IKLFDK_28770 | | flagellar motor protein | low | > 98 |
| Pseudomonas segetis P6 | 0.59 | ACVTMO_RS21935 | | TetR/AcrR family transcriptional regulator | 0.82 | ACVTMO_RS20655 | motA | flagellar motor stator protein MotA | low | > 75 |
| Pseudomonas stutzeri RCH2 | 0.55 | Psest_0248 | | Transcriptional regulator | 0.80 | Psest_0496 | | flagellar motor stator protein MotA | low | > 67 |
| Marinobacter adhaerens HP15 | 0.43 | HP15_3328 | | transcriptional regulator, TetR family | 0.52 | HP15_2510 | | flagellar motor protein MotA | low | > 73 |
| Lysobacter sp. OAE881 | 0.30 | ABIE51_RS12300 | | TetR/AcrR family transcriptional regulator | 0.48 | ABIE51_RS03720 | | flagellar motor stator protein MotA | low | > 62 |
| Paraburkholderia sabiae LMG 24235 | 0.28 | QEN71_RS24285 | | TetR/AcrR family transcriptional regulator | 0.43 | QEN71_RS16755 | | flagellar motor stator protein MotA | low | > 153 |
| Ralstonia sp. UNC404CL21Col | 0.28 | ABZR87_RS15000 | | TetR/AcrR family transcriptional regulator | 0.46 | ABZR87_RS17945 | | flagellar motor stator protein MotA | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.27 | RPSI07_RS14210 | | TetR family transcriptional regulator | 0.46 | RPSI07_RS06270 | | flagellar motor stator protein MotA | low | > 81 |
| Cupriavidus basilensis FW507-4G11 | 0.27 | RR42_RS05390 | | TetR family transcriptional regulator | 0.42 | RR42_RS35815 | | flagellar motor protein MotA | low | > 128 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.27 | H281DRAFT_04543 | | transcriptional regulator, TetR family | 0.42 | H281DRAFT_05739 | | chemotaxis protein MotA | low | > 103 |
| Burkholderia phytofirmans PsJN | 0.27 | BPHYT_RS06505 | | TetR family transcriptional regulator | 0.42 | BPHYT_RS19015 | | flagellar motor protein MotA | low | > 109 |
| Ralstonia solanacearum GMI1000 | 0.27 | RS_RS10465 | | TetR family transcriptional regulator | 0.46 | RS_RS23935 | | flagellar motor stator protein MotA | low | > 80 |
| Paraburkholderia graminis OAS925 | 0.27 | ABIE53_001566 | | AcrR family transcriptional regulator | 0.42 | ABIE53_000128 | | chemotaxis protein MotA | low | > 113 |
| Ralstonia solanacearum IBSBF1503 | 0.27 | RALBFv3_RS03095 | | TetR family transcriptional regulator | 0.46 | RALBFv3_RS17375 | | flagellar motor stator protein MotA | low | > 76 |
| Ralstonia solanacearum UW163 | 0.27 | UW163_RS10630 | | TetR family transcriptional regulator | 0.46 | UW163_RS21775 | | flagellar motor stator protein MotA | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.24 | GFF404 | | Transcriptional regulator, TetR family | 0.39 | GFF1437 | | Flagellar motor rotation protein MotA | low | > 90 |
| Acidovorax sp. GW101-3H11 | 0.24 | Ac3H11_1877 | | Transcriptional regulator, TetR family | 0.34 | Ac3H11_1389 | | Flagellar motor rotation protein MotA | low | > 79 |
| Variovorax sp. SCN45 | 0.22 | GFF4992 | | Transcriptional regulator, AcrR family | 0.40 | GFF5761 | | Flagellar motor rotation protein MotA | low | > 127 |
| Agrobacterium fabrum C58 | 0.22 | Atu1568 | | transcriptional regulator, TetR family | 0.36 | Atu0560 | | flagellar motor protein | low | > 89 |
Not shown: 8 genomes with orthologs for Psyr_4757 only; 50 genomes with orthologs for Psyr_0561 only