| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas syringae pv. syringae B728a | 1.0 | Psyr_3707 | | Sodium:dicarboxylate symporter | 1.0 | Psyr_0168 | | Phosphoenolpyruvate carboxykinase (ATP) | 0.44 | 6 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 1.00 | Psyr_3707 | | Sodium:dicarboxylate symporter | 1.00 | Psyr_0168 | | Phosphoenolpyruvate carboxykinase (ATP) | low | > 86 |
| Pseudomonas orientalis W4I3 | 0.92 | QF045_RS23590 | | dicarboxylate/amino acid:cation symporter | 0.86 | QF045_RS04340 | | phosphoenolpyruvate carboxykinase | low | > 93 |
| Pseudomonas lactucae CFBP13502 | 0.91 | GEMAOFIL_04444 | | C4-dicarboxylate transport protein 2 | 0.86 | GEMAOFIL_00469 | | Phosphoenolpyruvate carboxykinase (ATP) | low | > 96 |
| Pseudomonas fluorescens SBW25 | 0.91 | PFLU_RS23115 | | dicarboxylate/amino acid:cation symporter | 0.86 | PFLU_RS01320 | | phosphoenolpyruvate carboxykinase | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.91 | PFLU_RS23115 | | dicarboxylate/amino acid:cation symporter | 0.86 | PFLU_RS01320 | | phosphoenolpyruvate carboxykinase | low | > 109 |
| Pseudomonas simiae WCS417 | 0.90 | PS417_21500 | | C4 dicarboxylate transporter DctA (from data) | 0.85 | PS417_01210 | | hypothetical protein | low | > 88 |
| Pseudomonas sp. DMC3 | 0.90 | GFF4837 | | C4-dicarboxylate transport protein 2 | 0.85 | GFF4175 | | Phosphoenolpyruvate carboxykinase (ATP) | low | > 89 |
| Pseudomonas fluorescens FW300-N1B4 | 0.87 | Pf1N1B4_3487 | | Aerobic C4-dicarboxylate transporter for fumarate, L-malate, D-malate, succunate, aspartate | 0.86 | Pf1N1B4_1779 | | Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.87 | PfGW456L13_2016 | | C4-dicarboxylate transporter (from data) | 0.85 | PfGW456L13_420 | | Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) | 0.27 | 61 |
| Pseudomonas sp. SVBP6 | 0.86 | COO64_RS07410 | | dicarboxylate/amino acid:cation symporter | 0.84 | COO64_RS00660 | | phosphoenolpyruvate carboxykinase | low | > 93 |
| Pseudomonas sp. RS175 | 0.85 | PFR28_03241 | | C4-dicarboxylate transport protein 2 | 0.85 | PFR28_04874 | | Phosphoenolpyruvate carboxykinase (ATP) | 0.17 | 50 |
| Pseudomonas fluorescens FW300-N2C3 | 0.85 | AO356_18980 | | sodium:C4-dicarboxylate symporter (dctA) (from data) | 0.92 | AO356_10140 | | phosphoenolpyruvate carboxykinase [ATP] | 0.30 | 6 |
| Pseudomonas sp. BP01 | 0.85 | JOY50_RS01965 | | dicarboxylate/amino acid:cation symporter | 0.84 | JOY50_RS18315 | | phosphoenolpyruvate carboxykinase | low | > 84 |
| Pseudomonas fluorescens FW300-N2E3 | 0.84 | AO353_02800 | | C4-dicarboxylate transporter | 0.85 | AO353_11775 | | phosphoenolpyruvate carboxykinase [ATP] | 0.26 | 6 |
| Pseudomonas fluorescens FW300-N2E2 | 0.84 | Pf6N2E2_5707 | | Aerobic C4-dicarboxylate transporter for fumarate, L-malate, D-malate, succunate | 0.92 | Pf6N2E2_3899 | | Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) | 0.27 | 4 |
| Pseudomonas aeruginosa PA14 | 0.78 | IKLFDK_05485 | | C4-dicarboxylate transporter DctC | 0.81 | IKLFDK_27515 | | phosphoenolpyruvate carboxykinase | low | > 98 |
| Pseudomonas aeruginosa MRSN321 | 0.78 | DY961_RS06500 | dctA;inference=COORDINATES | C4-dicarboxylate transporter DctC | 0.81 | DY961_RS11825 | | phosphoenolpyruvate carboxykinase | — | — |
| Pseudomonas aeruginosa PUPa3 | 0.78 | DQ20_RS46295 | dctA;inference=COORDINATES | C4-dicarboxylate transporter DctC | 0.81 | DQ20_RS50285 | | phosphoenolpyruvate carboxykinase | low | > 101 |
| Pseudomonas sp. S08-1 | 0.77 | OH686_20585 | | Na+/H+-dicarboxylate symporter | 0.80 | OH686_11060 | | phosphoenolpyruvate carboxykinase (ATP) | low | > 80 |
| Escherichia coli ECRC100 | 0.73 | OKFHMN_16195 | dctA | C4-dicarboxylate transporter DctC | 0.37 | OKFHMN_17045 | pckA | phosphoenolpyruvate carboxykinase (ATP) | low | > 79 |
| Escherichia coli ECOR38 | 0.73 | HEPCGN_15100 | dctA | C4-dicarboxylate transporter DctC | 0.37 | HEPCGN_15865 | pckA | phosphoenolpyruvate carboxykinase (ATP) | low | > 88 |
| Escherichia coli ECRC99 | 0.73 | KEDOAH_11955 | dctA | C4-dicarboxylate transporter DctC | 0.37 | KEDOAH_11095 | pckA | phosphoenolpyruvate carboxykinase (ATP) | — | — |
| Escherichia coli ECOR27 | 0.73 | NOLOHH_08160 | dctA | C4-dicarboxylate transporter DctC | 0.37 | NOLOHH_08835 | pckA | phosphoenolpyruvate carboxykinase (ATP) | 0.63 | 2 |
| Escherichia coli Nissle 1917 | 0.73 | ECOLIN_RS20180 | | C4-dicarboxylate transporter DctC | 0.37 | ECOLIN_RS19435 | | phosphoenolpyruvate carboxykinase (ATP) | low | > 55 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.73 | OHPLBJKB_00174 | | Aerobic C4-dicarboxylate transport protein | 0.37 | OHPLBJKB_00300 | | Phosphoenolpyruvate carboxykinase (ATP) | low | > 74 |
| Escherichia coli ECRC98 | 0.73 | JDDGAC_19825 | dctA | C4-dicarboxylate transporter DctC | 0.37 | JDDGAC_20675 | pckA | phosphoenolpyruvate carboxykinase (ATP) | low | > 87 |
| Escherichia coli BW25113 | 0.73 | b3528 | dctA | C4 dicarboxylate/orotate:H+ symporter (DctA) (from data) | 0.37 | b3403 | pck | phosphoenolpyruvate carboxykinase (NCBI) | 0.39 | 5 |
| Escherichia coli ECRC102 | 0.73 | NIAGMN_13960 | dctA | C4-dicarboxylate transporter DctC | 0.37 | NIAGMN_14815 | pckA | phosphoenolpyruvate carboxykinase (ATP) | low | > 80 |
| Escherichia coli ECRC101 | 0.73 | MCAODC_06710 | dctA | C4-dicarboxylate transporter DctC | 0.37 | MCAODC_07575 | pckA | phosphoenolpyruvate carboxykinase (ATP) | low | > 87 |
| Escherichia coli ECRC62 | 0.73 | BNILDI_03395 | dctA | C4-dicarboxylate transporter DctC | 0.37 | BNILDI_02685 | pckA | phosphoenolpyruvate carboxykinase (ATP) | low | > 75 |
| Escherichia fergusonii Becca | 0.73 | EFB2_00280 | | Aerobic C4-dicarboxylate transport protein | 0.37 | EFB2_00425 | | Phosphoenolpyruvate carboxykinase (ATP) | low | > 86 |
| Escherichia coli BL21 | 0.73 | ECD_03376 | | C4-dicarboxylic acid, orotate and citrate transporter | 0.37 | ECD_03255 | | phosphoenolpyruvate carboxykinase [ATP] | low | > 61 |
| Rahnella sp. WP5 | 0.72 | EX31_RS05445 | | dicarboxylate/amino acid:cation symporter | 0.36 | EX31_RS04780 | | phosphoenolpyruvate carboxykinase (ATP) | 0.40 | 21 |
| Enterobacter asburiae PDN3 | 0.71 | EX28DRAFT_4049 | | Na+/H+-dicarboxylate symporters | 0.37 | EX28DRAFT_4140 | | phosphoenolpyruvate carboxykinase (ATP) | 0.46 | 13 |
| Enterobacter sp. TBS_079 | 0.71 | MPMX20_04413 | | Aerobic C4-dicarboxylate transport protein | 0.37 | MPMX20_04290 | | Phosphoenolpyruvate carboxykinase (ATP) | 0.39 | 2 |
| Klebsiella pneumoniae MKP103 | 0.71 | KDGMDA_07500 | | C4-dicarboxylate transport protein | 0.37 | KDGMDA_06970 | | phosphoenolpyruvate carboxykinase (ATP) | low | > 95 |
| Serratia liquefaciens MT49 | 0.71 | IAI46_00550 | | dicarboxylate/amino acid:cation symporter | 0.37 | IAI46_10700 | | phosphoenolpyruvate carboxykinase (ATP) | low | > 87 |
| Klebsiella michiganensis M5al | 0.71 | BWI76_RS26760 | | C4-dicarboxylate transport protein DctA (from data) | 0.37 | BWI76_RS26155 | | phosphoenolpyruvate carboxykinase (ATP) | 0.15 | 63 |
| Dickeya dianthicola ME23 | 0.70 | DZA65_RS21850 | | dicarboxylate/amino acid:cation symporter | 0.36 | DZA65_RS20830 | | phosphoenolpyruvate carboxykinase (ATP) | low | > 75 |
| Dickeya dianthicola 67-19 | 0.70 | HGI48_RS20835 | | dicarboxylate/amino acid:cation symporter | 0.36 | HGI48_RS19740 | | phosphoenolpyruvate carboxykinase (ATP) | low | > 71 |
| Pantoea agglomerans CFBP13505 P0401 | 0.70 | PagCFBP13505_RS15580 | | dicarboxylate/amino acid:cation symporter | 0.35 | PagCFBP13505_RS18350 | | phosphoenolpyruvate carboxykinase (ATP) | 0.81 | 18 |
| Pectobacterium carotovorum WPP14 | 0.70 | HER17_RS00400 | | dicarboxylate/amino acid:cation symporter | 0.35 | HER17_RS01710 | | phosphoenolpyruvate carboxykinase (ATP) | low | > 75 |
| Erwinia tracheiphila SCR3 | 0.70 | LU632_RS00330 | | dicarboxylate/amino acid:cation symporter | 0.36 | LU632_RS22930 | pckA | phosphoenolpyruvate carboxykinase (ATP) | 0.66 | 1 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.70 | GFF495 | | Aerobic C4-dicarboxylate transporter for fumarate, L-malate, D-malate, succunate | 0.37 | GFF615 | | Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) | low | > 78 |
| Erwinia tracheiphila HP pepo 2.2 | 0.70 | IJEDHG_10165 | dctA | C4-dicarboxylate transport protein | 0.36 | IJEDHG_11970 | pckA | phosphoenolpyruvate carboxykinase (ATP) | 0.74 | 12 |
| Pantoea sp. MT58 | 0.70 | IAI47_18585 | | dicarboxylate/amino acid:cation symporter | 0.36 | IAI47_01830 | | phosphoenolpyruvate carboxykinase (ATP) | 0.27 | 63 |
| Dickeya dadantii 3937 | 0.69 | DDA3937_RS00555 | | dicarboxylate/amino acid:cation symporter | 0.36 | DDA3937_RS19610 | | phosphoenolpyruvate carboxykinase (ATP) | low | > 74 |
| Erwinia amylovora T8 | 0.69 | OLJFJH_04805 | | C4-dicarboxylate transport protein | 0.36 | OLJFJH_04150 | | phosphoenolpyruvate carboxykinase (ATP) | low | > 58 |
| Agrobacterium fabrum C58 | 0.61 | Atu3298 | | C4-dicarboxylate transporter DctA | 0.42 | Atu0035 | | phosphoenolpyruvate carboxykinase | 0.45 | 4 |
| Rhizobium sp. OAE497 | 0.61 | ABIE40_RS26345 | | dicarboxylate/amino acid:cation symporter | 0.41 | ABIE40_RS19415 | | phosphoenolpyruvate carboxykinase | 0.30 | 96 |
| Xanthobacter sp. DMC5 | 0.58 | GFF3677 | | C4-dicarboxylate transport protein | 0.42 | GFF4136 | | Phosphoenolpyruvate carboxykinase (ATP) | — | — |
| Sinorhizobium meliloti 1021 | 0.57 | SM_b20611 | | C4-dicarboxylate transporter DctA | 0.41 | SMc02562 | | phosphoenolpyruvate carboxykinase | 0.38 | 7 |
| Sphingobium sp. HT1-2 | 0.55 | GFF161 | | Na+/H+-dicarboxylate symporter | 0.43 | GFF3825 | | Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) | low | > 95 |
| Sphingomonas koreensis DSMZ 15582 | 0.54 | Ga0059261_0617 | | Na+/H+-dicarboxylate symporters | 0.40 | Ga0059261_0913 | | phosphoenolpyruvate carboxykinase (ATP) | — | — |
| Rhodopseudomonas palustris CGA009 | 0.51 | TX73_012660 | | dicarboxylate/amino acid:cation symporter | 0.41 | TX73_001865 | | phosphoenolpyruvate carboxykinase | — | — |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.49 | CA265_RS15560 | | glutamate/aspartate:proton symporter GltP | 0.43 | CA265_RS23490 | | phosphoenolpyruvate carboxykinase (ATP) | low | > 88 |
Not shown: 30 genomes with orthologs for Psyr_3707 only; 23 genomes with orthologs for Psyr_0168 only