Conservation of cofitness between Pf6N2E2_608 and Pf6N2E2_3081 in Pseudomonas fluorescens FW300-N2E2

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2E2 1.0 Pf6N2E2_608 Transcriptional regulator of the arabinose operon in Shewanella, GntR family 1.0 Pf6N2E2_3081 HesA/MoeB/ThiF family protein related to EC-YgdL 0.34 15
Pseudomonas fluorescens FW300-N2C3 0.99 AO356_24580 GntR family transcriptional regulator 0.99 AO356_06085 thiamine biosynthesis protein ThiF low > 104
Pseudomonas sp. RS175 0.92 PFR28_01578 HTH-type transcriptional regulator LutR 0.99 PFR28_00387 tRNA threonylcarbamoyladenosine dehydratase low > 88
Pseudomonas sp. DMC3 0.91 GFF3037 HTH-type transcriptional repressor NanR 0.99 GFF2044 tRNA threonylcarbamoyladenosine dehydratase low > 89
Pseudomonas fluorescens GW456-L13 0.91 PfGW456L13_3321 Transcriptional regulator of the arabinose operon in Shewanella, GntR family 0.98 PfGW456L13_4719 HesA/MoeB/ThiF family protein related to EC-YgdL low > 87
Pseudomonas fluorescens FW300-N1B4 0.90 Pf1N1B4_4620 Transcriptional regulator of the arabinose operon in Shewanella, GntR family 0.98 Pf1N1B4_3074 HesA/MoeB/ThiF family protein related to EC-YgdL — —
Pseudomonas syringae pv. syringae B728a 0.85 Psyr_1707 transcriptional regulator, GntR family 0.86 Psyr_1333 UBA/THIF-type NAD/FAD binding fold protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.85 Psyr_1707 transcriptional regulator, GntR family 0.86 Psyr_1333 UBA/THIF-type NAD/FAD binding fold protein low > 86
Pseudomonas lactucae CFBP13502 0.63 GEMAOFIL_02504 HTH-type transcriptional regulator LutR 0.94 GEMAOFIL_01403 tRNA threonylcarbamoyladenosine dehydratase low > 93
Pseudomonas fluorescens SBW25 0.63 PFLU_RS11620 FadR family transcriptional regulator 0.95 PFLU_RS06230 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 109
Pseudomonas simiae WCS417 0.63 PS417_10995 GntR family transcriptional regulator 0.94 PS417_06165 thiamine biosynthesis protein ThiF low > 88
Pseudomonas fluorescens SBW25-INTG 0.63 PFLU_RS11620 FadR family transcriptional regulator 0.95 PFLU_RS06230 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 109
Paraburkholderia sabiae LMG 24235 0.59 QEN71_RS16805 FadR/GntR family transcriptional regulator 0.42 QEN71_RS02715 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 153
Acinetobacter baumannii LAC-4 0.58 RR41_RS13565 FadR family transcriptional regulator 0.38 RR41_RS16175 tRNA threonylcarbamoyladenosine dehydratase — —
Shewanella sp. ANA-3 0.31 Shewana3_2068 GntR family transcriptional regulator (RefSeq) 0.56 Shewana3_0735 UBA/THIF-type NAD/FAD binding protein (RefSeq) low > 73
Rhodanobacter sp000427505 FW510-R12 0.31 LRK53_RS04915 FadR family transcriptional regulator 0.45 LRK53_RS13790 ThiF family adenylyltransferase — —
Dyella japonica UNC79MFTsu3.2 0.31 ABZR86_RS01230 FadR/GntR family transcriptional regulator 0.48 ABZR86_RS00565 ThiF family adenylyltransferase low > 74
Rhodanobacter sp. FW510-T8 0.29 OKGIIK_12495 FadR family transcriptional regulator 0.41 OKGIIK_03630 tcdA tRNA A37 threonylcarbamoyladenosine dehydratase low > 53
Lysobacter sp. OAE881 0.28 ABIE51_RS10925 FadR/GntR family transcriptional regulator 0.43 ABIE51_RS12585 tRNA threonylcarbamoyladenosine dehydratase low > 62
Klebsiella michiganensis M5al 0.27 BWI76_RS27950 transcriptional regulator 0.49 BWI76_RS22975 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 92
Escherichia coli ECRC62 0.26 BNILDI_04335 dgoR D-galactonate utilization transcriptional regulator DgoR 0.53 BNILDI_10480 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 75
Escherichia coli BL21 0.26 ECD_03578 D-galactonate catabolism operon transcriptional repressor 0.53 ECD_02663 tRNA threonylcarbamoyladenosine dehydratase; sulfur acceptor for CsdA low > 61
Escherichia coli ECOR38 0.26 HEPCGN_13760 dgoR D-galactonate utilization transcriptional regulator DgoR 0.53 HEPCGN_19350 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 88
Escherichia coli ECOR27 0.26 NOLOHH_07195 dgoR D-galactonate utilization transcriptional regulator DgoR 0.53 NOLOHH_11975 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 76
Escherichia coli Nissle 1917 0.26 ECOLIN_RS21280 D-galactonate utilization transcriptional regulator DgoR 0.53 ECOLIN_RS15670 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 0.31 51
Escherichia coli BW25113 0.26 b4479 dgoR predicted DNA-binding transcriptional regulator (NCBI) 0.53 b2812 ygdL hypothetical protein (NCBI) low > 76
Escherichia fergusonii Becca 0.26 EFB2_00008 HTH-type transcriptional regulator LutR 0.53 EFB2_01105 tRNA threonylcarbamoyladenosine dehydratase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.26 OHPLBJKB_00008 HTH-type transcriptional regulator LutR 0.53 OHPLBJKB_00919 tRNA threonylcarbamoyladenosine dehydratase low > 74
Enterobacter asburiae PDN3 0.25 EX28DRAFT_3982 Transcriptional regulators 0.50 EX28DRAFT_2888 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 low > 76
Enterobacter sp. TBS_079 0.25 MPMX20_00008 HTH-type transcriptional regulator LutR 0.50 MPMX20_03675 tRNA threonylcarbamoyladenosine dehydratase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.25 GFF1762 D-Galactonate repressor DgoR 0.53 GFF4870 CsdL (EC-YgdL) protein of the HesA/MoeB/ThiF family, part of the CsdA-E-L sulfur transfer pathway low > 78
Klebsiella pneumoniae MKP103 0.25 KDGMDA_08645 D-galactonate utilization transcriptional regulator DgoR 0.50 KDGMDA_03540 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 95
Dickeya dianthicola 67-19 0.24 HGI48_RS06925 D-galactonate utilization transcriptional regulator DgoR 0.51 HGI48_RS05035 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 71
Dickeya dianthicola ME23 0.24 DZA65_RS07270 D-galactonate utilization transcriptional regulator DgoR 0.51 DZA65_RS05375 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 75
Rahnella sp. WP5 0.23 EX31_RS10335 D-galactonate utilization transcriptional regulator DgoR 0.50 EX31_RS13130 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 89
Serratia liquefaciens MT49 0.23 IAI46_03180 FadR family transcriptional regulator 0.52 IAI46_20360 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 86
Paraburkholderia bryophila 376MFSha3.1 0.22 H281DRAFT_00739 transcriptional regulator, GntR family 0.44 H281DRAFT_04134 tRNA A37 threonylcarbamoyladenosine dehydratase low > 103
Pantoea sp. MT58 0.22 IAI47_00030 FadR family transcriptional regulator 0.52 IAI47_04005 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 76

Not shown: 5 genomes with orthologs for Pf6N2E2_608 only; 48 genomes with orthologs for Pf6N2E2_3081 only