Conservation of cofitness between MIT1002_03473 and MIT1002_03983 in Alteromonas macleodii MIT1002

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Alteromonas macleodii MIT1002 1.0 MIT1002_03473 5-keto-D-gluconate transporter 1.0 MIT1002_03983 Putative general secretion pathway protein K 0.49 17
Erwinia amylovora T8 0.36 OLJFJH_04270 gluconate transporter 0.11 OLJFJH_01145 type II secretion system minor pseudopilin GspK low > 58
Enterobacter sp. TBS_079 0.36 MPMX20_04302 High-affinity gluconate transporter 0.12 MPMX20_01522 hypothetical protein low > 85
Dickeya dianthicola 67-19 0.35 HGI48_RS19890 gluconate transporter 0.21 HGI48_RS14700 type II secretion system minor pseudopilin GspK low > 71
Klebsiella michiganensis M5al 0.35 BWI76_RS26235 gluconate transporter 0.19 BWI76_RS05055 type II secretion system protein K low > 92
Dickeya dadantii 3937 0.35 DDA3937_RS19775 gluconate transporter 0.24 DDA3937_RS14765 type II secretion system minor pseudopilin GspK low > 74
Dickeya dianthicola ME23 0.35 DZA65_RS20960 gluconate transporter 0.21 DZA65_RS15645 type II secretion system minor pseudopilin GspK low > 75
Enterobacter asburiae PDN3 0.35 EX28DRAFT_4127 gluconate transporter 0.12 EX28DRAFT_2072 Type II secretory pathway, component PulK low > 76
Escherichia coli BL21 0.35 ECD_04131 L-idonate and D-gluconate transporter 0.18 ECD_02831 putative type II secretion protein GspK low > 61
Escherichia coli ECOR38 0.35 HEPCGN_09955 idnT gnt-II system L-idonate transporter 0.18 HEPCGN_18085 gspK general secretion pathway protein K low > 88
Escherichia fergusonii Becca 0.35 EFB2_04270 Gnt-II system L-idonate transporter 0.18 EFB2_00852 Putative type II secretion system protein K low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.35 OHPLBJKB_03771 Gnt-II system L-idonate transporter 0.18 OHPLBJKB_00746 Putative type II secretion system protein K low > 74
Escherichia coli ECOR27 0.35 NOLOHH_04030 idnT gnt-II system L-idonate transporter 0.18 NOLOHH_11010 gspK general secretion pathway protein K low > 76
Pseudomonas aeruginosa MRSN321 0.35 DY961_RS18000 GntP family permease 0.11 DY961_RS01440 xcpX;inference=COORDINATES GspK family T2SS minor pseudopilin variant XcpX low > 100
Pseudomonas aeruginosa PA14 0.35 IKLFDK_11385 Gluconate permease 0.12 IKLFDK_15760 GspK family T2SS minor pseudopilin variant XcpX low > 98
Ralstonia sp. UNC404CL21Col 0.35 ABZR87_RS19095 gluconate:H+ symporter 0.08 ABZR87_RS03430 type II secretion system minor pseudopilin GspK low > 80
Pseudomonas aeruginosa PUPa3 0.35 DQ20_RS59240 GntP family permease 0.12 DQ20_RS34115 xcpX;inference=COORDINATES GspK family T2SS minor pseudopilin variant XcpX low > 101
Escherichia coli ECRC102 0.34 NIAGMN_14615 gntU gluconate transporter 0.22 NIAGMN_28570 gspK type II secretion system minor pseudopilin GspK low > 80
Escherichia coli ECRC100 0.34 OKFHMN_16845 gntU gluconate transporter 0.22 OKFHMN_00250 gspK type II secretion system minor pseudopilin GspK low > 79
Escherichia coli ECRC101 0.34 MCAODC_07375 gntU gluconate transporter 0.22 MCAODC_15300 gspK type II secretion system minor pseudopilin GspK low > 87
Escherichia coli ECRC98 0.34 JDDGAC_20475 gntU gluconate transporter 0.22 JDDGAC_30330 gspK type II secretion system minor pseudopilin GspK low > 87
Rahnella sp. WP5 0.34 EX31_RS16635 gluconate transporter 0.16 EX31_RS16200 type II secretion system minor pseudopilin GspK low > 89
Paraburkholderia sabiae LMG 24235 0.34 QEN71_RS26910 GntP family permease 0.09 QEN71_RS29550 type II secretion system minor pseudopilin GspK low > 153
Erwinia tracheiphila HP pepo 2.2 0.34 IJEDHG_08030 gntU gluconate transporter 0.10 IJEDHG_09720 general secretion pathway protein GspK low > 61
Erwinia tracheiphila SCR3 0.34 LU632_RS19170 gntU gluconate transporter 0.10 LU632_RS25260 type II secretion system protein GspK low > 73
Klebsiella pneumoniae MKP103 0.34 KDGMDA_07030 gluconate transporter 0.24 KDGMDA_13310 type II secretion system minor pseudopilin GspK low > 95
Paraburkholderia bryophila 376MFSha3.1 0.34 H281DRAFT_04276 gluconate permease GntT 0.11 H281DRAFT_02348 general secretion pathway protein K low > 103
Burkholderia phytofirmans PsJN 0.33 BPHYT_RS16725 gluconate:H+ symporter (gntT) (from data) 0.11 BPHYT_RS19635 general secretion pathway protein K 0.14 106
Acinetobacter baumannii LAC-4 0.31 RR41_RS16520 gluconate:H+ symporter 0.12 RR41_RS12100 type II secretion system minor pseudopilin GspK low > 55
Pectobacterium carotovorum WPP14 0.28 HER17_RS01460 GntP family permease 0.20 HER17_RS06720 type II secretion system minor pseudopilin GspK low > 75
Vibrio cholerae E7946 ATCC 55056 0.28 CSW01_01470 permease 0.24 CSW01_13755 type II secretion system protein K — —
Sphingobium sp. HT1-2 0.24 GFF1926 Gluconate transporter family protein 0.16 GFF3512 General secretion pathway protein K low > 95
Shewanella loihica PV-4 0.21 Shew_2533 gluconate transporter (RefSeq) 0.34 Shew_3612 general secretion pathway protein K (RefSeq) low > 60
Shewanella oneidensis MR-1 0.18 SO1771 permease, GntP family (NCBI ptt file) 0.32 SO0173 gspK general secretion pathway protein K (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.17 Shewana3_2684 gluconate transporter (RefSeq) 0.32 Shewana3_0158 general secretion pathway protein K (RefSeq) low > 73

Not shown: 42 genomes with orthologs for MIT1002_03473 only; 8 genomes with orthologs for MIT1002_03983 only