Conservation of cofitness between GFF1491 and GFF989 in Sphingobium sp. HT1-2

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF1491 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) 1.0 GFF989 Psp operon transcriptional activator 0.63 17
Shewanella loihica PV-4 0.59 Shew_1609 6-phosphogluconate dehydrogenase, NAD-binding (RefSeq) 0.52 Shew_2497 sigma-54 dependent trancsriptional regulator (RefSeq) low > 60
Shewanella amazonensis SB2B 0.58 Sama_1975 2-hydroxy-3-oxopropionate reductase (RefSeq) 0.50 Sama_1236 psp operon transcriptional activator (RefSeq) low > 62
Shewanella sp. ANA-3 0.58 Shewana3_2554 6-phosphogluconate dehydrogenase, NAD-binding (RefSeq) 0.50 Shewana3_2649 Fis family transcriptional regulator (RefSeq) low > 73
Shewanella oneidensis MR-1 0.57 SO2771 garR 2-hydroxy-3-oxopropionate reductase (NCBI ptt file) 0.49 SO1806 pspF psp operon transcriptional activator (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.52 MIT1002_01976 2-hydroxy-3-oxopropionate reductase 0.47 MIT1002_01142 Phage shock protein F low > 70
Vibrio cholerae E7946 ATCC 55056 0.49 CSW01_14090 NAD(P)-dependent oxidoreductase 0.45 CSW01_08440 phage shock protein operon transcriptional activator low > 62
Azospirillum brasilense Sp245 0.28 AZOBR_RS07955 tartronate semialdehyde reductase 0.49 AZOBR_RS02540 ATPase AAA low > 97
Klebsiella pneumoniae MKP103 0.28 KDGMDA_05690 2-hydroxy-3-oxopropionate reductase 0.49 KDGMDA_19915 phage shock protein operon transcriptional activator low > 95
Pantoea agglomerans CFBP13505 P0401 0.28 PagCFBP13505_RS16870 2-hydroxy-3-oxopropionate reductase 0.49 PagCFBP13505_RS06760 phage shock protein operon transcriptional activator low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.28 GFF1536 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) 0.47 GFF2687 Psp operon transcriptional activator 0.62 2
Escherichia coli ECRC62 0.28 BNILDI_01380 garR 2-hydroxy-3-oxopropionate reductase 0.49 BNILDI_18250 pspF phage shock protein operon transcriptional activator low > 75
Escherichia coli ECOR27 0.28 NOLOHH_10150 garR 2-hydroxy-3-oxopropionate reductase 0.49 NOLOHH_20100 pspF phage shock protein operon transcriptional activator low > 76
Escherichia coli ECRC99 0.28 KEDOAH_09780 garR 2-hydroxy-3-oxopropionate reductase 0.49 KEDOAH_26360 pspF phage shock protein operon transcriptional activator — —
Escherichia coli Nissle 1917 0.28 ECOLIN_RS17960 2-hydroxy-3-oxopropionate reductase 0.49 ECOLIN_RS07845 phage shock protein operon transcriptional activator — —
Escherichia coli ECOR38 0.28 HEPCGN_17205 garR 2-hydroxy-3-oxopropionate reductase 0.49 HEPCGN_25785 pspF phage shock protein operon transcriptional activator low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.28 OHPLBJKB_00578 2-hydroxy-3-oxopropionate reductase 0.49 OHPLBJKB_02379 Psp operon transcriptional activator low > 74
Escherichia coli ECRC100 0.28 OKFHMN_18370 garR 2-hydroxy-3-oxopropionate reductase 0.49 OKFHMN_02415 pspF phage shock protein operon transcriptional activator low > 79
Escherichia coli BL21 0.28 ECD_02990 tartronate semialdehyde reductase 0.48 ECD_01280 psp operon transcriptional activator — —
Escherichia coli ECRC101 0.28 MCAODC_08880 garR 2-hydroxy-3-oxopropionate reductase 0.49 MCAODC_15855 pspF phage shock protein operon transcriptional activator low > 87
Escherichia coli ECRC102 0.28 NIAGMN_16130 garR 2-hydroxy-3-oxopropionate reductase 0.49 NIAGMN_26585 pspF phage shock protein operon transcriptional activator — —
Escherichia coli ECRC98 0.28 JDDGAC_22000 garR 2-hydroxy-3-oxopropionate reductase 0.49 JDDGAC_04960 pspF phage shock protein operon transcriptional activator low > 87
Escherichia coli BW25113 0.28 b3125 garR tartronate semialdehyde reductase (RefSeq) 0.48 b1303 pspF psp operon transcriptional activator (VIMSS) low > 76
Rahnella sp. WP5 0.27 EX31_RS07980 2-hydroxy-3-oxopropionate reductase 0.50 EX31_RS15690 phage shock protein operon transcriptional activator low > 89
Pantoea sp. MT58 0.27 IAI47_04100 2-hydroxy-3-oxopropionate reductase 0.49 IAI47_09390 phage shock protein operon transcriptional activator low > 76
Dickeya dadantii 3937 0.27 DDA3937_RS17035 2-hydroxy-3-oxopropionate reductase 0.49 DDA3937_RS12430 phage shock protein operon transcriptional activator low > 74
Escherichia fergusonii Becca 0.26 EFB2_00694 2-hydroxy-3-oxopropionate reductase 0.49 EFB2_02624 Psp operon transcriptional activator low > 86
Dickeya dianthicola ME23 0.26 DZA65_RS18165 2-hydroxy-3-oxopropionate reductase 0.48 DZA65_RS12950 phage shock protein operon transcriptional activator low > 75
Dickeya dianthicola 67-19 0.26 HGI48_RS17090 2-hydroxy-3-oxopropionate reductase 0.48 HGI48_RS12500 phage shock protein operon transcriptional activator low > 71
Klebsiella michiganensis M5al 0.26 BWI76_RS24825 2-hydroxy-3-oxopropionate reductase 0.49 BWI76_RS12445 phage shock protein operon transcriptional activator low > 92
Erwinia tracheiphila HP pepo 2.2 0.26 IJEDHG_17355 garR 2-hydroxy-3-oxopropionate reductase 0.49 IJEDHG_23015 pspF phage shock protein operon transcriptional activator low > 61
Erwinia tracheiphila SCR3 0.26 LU632_RS06330 garR 2-hydroxy-3-oxopropionate reductase 0.49 LU632_RS11565 pspF phage shock protein operon transcriptional activator low > 73
Enterobacter sp. TBS_079 0.25 MPMX20_04033 2-hydroxy-3-oxopropionate reductase 0.48 MPMX20_02473 Psp operon transcriptional activator low > 85
Enterobacter asburiae PDN3 0.25 EX28DRAFT_3182 2-hydroxy-3-oxopropionate reductase 0.47 EX28DRAFT_0975 psp operon transcriptional activator PspF low > 76
Pectobacterium carotovorum WPP14 0.25 HER17_RS04095 2-hydroxy-3-oxopropionate reductase 0.49 HER17_RS09515 phage shock protein operon transcriptional activator low > 75
Desulfovibrio vulgaris Miyazaki F 0.24 DvMF_2927 garR tartronate semialdehyde reductase (RefSeq) 0.43 DvMF_1798 sigma54 specific transcriptional acivator, PspF, Fis family (RefSeq) low > 51
Azospirillum sp. SherDot2 0.23 MPMX19_05813 2-hydroxy-3-oxopropionate reductase 0.51 MPMX19_02138 Psp operon transcriptional activator low > 112

Not shown: 52 genomes with orthologs for GFF1491 only; 5 genomes with orthologs for GFF989 only