| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 1.0 | GFF3669 | | Integration host factor beta subunit | 1.0 | GFF630 | | 3-dehydroquinate synthase (EC 4.2.3.4) | 0.85 | 16 |
| Escherichia coli ECRC99 | 0.99 | KEDOAH_22270 | ihfB | integration host factor subunit beta | 0.91 | KEDOAH_11025 | aroB | 3-dehydroquinate synthase | — | — |
| Escherichia coli ECOR38 | 0.99 | HEPCGN_23060 | ihfB | integration host factor subunit beta | 0.91 | HEPCGN_15935 | aroB | 3-dehydroquinate synthase | — | — |
| Escherichia coli ECRC101 | 0.99 | MCAODC_24855 | ihfB | integration host factor subunit beta | 0.91 | MCAODC_07645 | aroB | 3-dehydroquinate synthase | 0.36 | 67 |
| Escherichia coli ECRC98 | 0.99 | JDDGAC_09075 | ihfB | integration host factor subunit beta | 0.91 | JDDGAC_20745 | aroB | 3-dehydroquinate synthase | — | — |
| Escherichia coli BW25113 | 0.99 | b0912 | ihfB | integration host factor subunit beta (NCBI) | 0.91 | b3389 | aroB | 3-dehydroquinate synthase (NCBI) | 0.43 | 29 |
| Escherichia coli ECOR27 | 0.99 | NOLOHH_22025 | ihfB | integration host factor subunit beta | 0.91 | NOLOHH_08905 | aroB | 3-dehydroquinate synthase | — | — |
| Escherichia coli Nissle 1917 | 0.99 | ECOLIN_RS04830 | | integration host factor subunit beta | 0.90 | ECOLIN_RS19360 | | 3-dehydroquinate synthase | — | — |
| Escherichia coli ECRC102 | 0.99 | NIAGMN_03185 | ihfB | integration host factor subunit beta | 0.91 | NIAGMN_14885 | aroB | 3-dehydroquinate synthase | low | > 80 |
| Escherichia fergusonii Becca | 0.99 | EFB2_03152 | | Integration host factor subunit beta | 0.91 | EFB2_00439 | | 3-dehydroquinate synthase | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.99 | OHPLBJKB_02756 | | Integration host factor subunit beta | 0.91 | OHPLBJKB_00314 | | 3-dehydroquinate synthase | — | — |
| Escherichia coli BL21 | 0.99 | ECD_00916 | | integration host factor (IHF), DNA-binding protein, beta subunit | 0.91 | ECD_03241 | | 3-dehydroquinate synthase | — | — |
| Escherichia coli ECRC62 | 0.99 | BNILDI_20280 | ihfB | integration host factor subunit beta | 0.91 | BNILDI_02615 | aroB | 3-dehydroquinate synthase | — | — |
| Escherichia coli ECRC100 | 0.99 | OKFHMN_05465 | ihfB | integration host factor subunit beta | 0.91 | OKFHMN_17115 | aroB | 3-dehydroquinate synthase | — | — |
| Klebsiella michiganensis M5al | 0.98 | BWI76_RS09785 | | integration host factor subunit beta | 0.85 | BWI76_RS26085 | | 3-dehydroquinate synthase | — | — |
| Klebsiella pneumoniae MKP103 | 0.98 | KDGMDA_17985 | | integration host factor subunit beta | 0.86 | KDGMDA_06910 | | 3-dehydroquinate synthase | low | > 95 |
| Enterobacter sp. TBS_079 | 0.98 | MPMX20_01570 | | Integration host factor subunit beta | 0.87 | MPMX20_04278 | | 3-dehydroquinate synthase | 0.51 | 20 |
| Enterobacter asburiae PDN3 | 0.98 | EX28DRAFT_2024 | | integration host factor, beta subunit | 0.87 | EX28DRAFT_4153 | | 3-dehydroquinate synthase (EC 4.2.3.4) | — | — |
| Pantoea agglomerans CFBP13505 P0401 | 0.95 | PagCFBP13505_RS04485 | | integration host factor subunit beta | 0.83 | PagCFBP13505_RS21700 | | 3-dehydroquinate synthase | — | — |
| Pantoea sp. MT58 | 0.95 | IAI47_12845 | | integration host factor subunit beta | 0.83 | IAI47_01895 | | 3-dehydroquinate synthase | — | — |
| Serratia liquefaciens MT49 | 0.95 | IAI46_08655 | | integration host factor subunit beta | 0.81 | IAI46_23700 | | 3-dehydroquinate synthase | — | — |
| Erwinia tracheiphila HP pepo 2.2 | 0.94 | IJEDHG_20290 | ihfB | integration host factor subunit beta | 0.81 | IJEDHG_12035 | aroB | 3-dehydroquinate synthase | — | — |
| Pectobacterium carotovorum WPP14 | 0.94 | HER17_RS12270 | | integration host factor subunit beta | 0.80 | HER17_RS01780 | | 3-dehydroquinate synthase | — | — |
| Erwinia amylovora T8 | 0.94 | OLJFJH_16120 | | integration host factor subunit beta | 0.84 | OLJFJH_04090 | | 3-dehydroquinate synthase | — | — |
| Erwinia tracheiphila SCR3 | 0.94 | LU632_RS09810 | ihfB | integration host factor subunit beta | 0.81 | LU632_RS22865 | aroB | 3-dehydroquinate synthase | — | — |
| Rahnella sp. WP5 | 0.94 | EX31_RS18235 | | integration host factor subunit beta | 0.84 | EX31_RS04720 | | 3-dehydroquinate synthase | — | — |
| Dickeya dadantii 3937 | 0.92 | DDA3937_RS09690 | | integration host factor subunit beta | 0.80 | DDA3937_RS19545 | | 3-dehydroquinate synthase | — | — |
| Dickeya dianthicola 67-19 | 0.91 | HGI48_RS09700 | | integration host factor subunit beta | 0.80 | HGI48_RS19675 | | 3-dehydroquinate synthase | — | — |
| Dickeya dianthicola ME23 | 0.91 | DZA65_RS10010 | | integration host factor subunit beta | 0.80 | DZA65_RS20760 | | 3-dehydroquinate synthase | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.83 | CSW01_09575 | | integration host factor subunit beta | 0.63 | CSW01_13300 | | 3-dehydroquinate synthase | — | — |
| Shewanella amazonensis SB2B | 0.81 | Sama_1737 | ihfB | integration host factor subunit beta (RefSeq) | 0.63 | Sama_3367 | | 3-dehydroquinate synthase (RefSeq) | low | > 62 |
| Shewanella oneidensis MR-1 | 0.79 | SO2401 | ihfB | integration host factor, beta subunit (NCBI ptt file) | 0.63 | SO0287 | aroB | 3-dehydroquinate synthase (NCBI ptt file) | — | — |
| Shewanella sp. ANA-3 | 0.79 | Shewana3_1978 | ihfB | integration host factor subunit beta (RefSeq) | 0.63 | Shewana3_3893 | aroB | 3-dehydroquinate synthase (RefSeq) | — | — |
| Shewanella loihica PV-4 | 0.79 | Shew_1955 | | integration host factor, beta subunit (RefSeq) | 0.62 | Shew_0214 | | 3-dehydroquinate synthase (RefSeq) | — | — |
| Alteromonas macleodii MIT1002 | 0.77 | MIT1002_02188 | | Integration host factor subunit beta | 0.61 | MIT1002_00447 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas stutzeri RCH2 | 0.74 | Psest_1805 | | integration host factor, beta subunit | 0.55 | Psest_3713 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas aeruginosa MRSN321 | 0.74 | DY961_RS01135 | ihfB;go_function=DNA | integration host factor subunit beta | 0.57 | DY961_RS11010 | aroB;go_function=3-dehydroquinate | 3-dehydroquinate synthase | — | — |
| Pseudomonas aeruginosa PA14 | 0.74 | IKLFDK_16065 | | integration host factor subunit beta | 0.58 | IKLFDK_28340 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas aeruginosa PUPa3 | 0.74 | DQ20_RS34410 | ihfB;go_function=DNA | integration host factor subunit beta | 0.57 | DQ20_RS51065 | aroB;go_function=3-dehydroquinate | 3-dehydroquinate synthase | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.73 | Pf1N1B4_345 | | Integration host factor beta subunit | 0.56 | Pf1N1B4_1537 | | 3-dehydroquinate synthase (EC 4.2.3.4) | — | — |
| Pseudomonas segetis P6 | 0.73 | MPMX49_02893 | | Integration host factor subunit beta | 0.56 | MPMX49_04233 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.73 | PfGW456L13_2181 | | Integration host factor beta subunit | 0.56 | PfGW456L13_275 | | 3-dehydroquinate synthase (EC 4.2.3.4) | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.73 | Psyr_3641 | | Integration host factor, beta subunit | 0.54 | Psyr_0409 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas orientalis W4I3 | 0.73 | QF045_RS10875 | | integration host factor subunit beta | 0.56 | QF045_RS05050 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas sp. S08-1 | 0.73 | OH686_20895 | | integration host factor, beta subunit | 0.55 | OH686_10015 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.73 | AO353_02040 | | integration host factor subunit beta | 0.55 | AO353_12505 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas sp. DMC3 | 0.73 | GFF4671 | | Integration host factor subunit beta | 0.54 | GFF3100 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas putida KT2440 | 0.73 | PP_1773 | | Integration host factor subunit beta | 0.56 | PP_5078 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas sp. RS175 | 0.73 | PFR28_00913 | | Integration host factor subunit beta | 0.55 | PFR28_05013 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas fluorescens SBW25 | 0.73 | PFLU_RS08125 | | integration host factor subunit beta | 0.56 | PFLU_RS02030 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.73 | AO356_03435 | | integration host factor subunit beta | 0.56 | AO356_09385 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.73 | PFLU_RS08125 | | integration host factor subunit beta | 0.56 | PFLU_RS02030 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas sp. SVBP6 | 0.73 | COO64_RS06725 | ihfB | integration host factor subunit beta | 0.54 | COO64_RS13075 | aroB | 3-dehydroquinate synthase | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.73 | Psyr_3641 | | Integration host factor, beta subunit | 0.54 | Psyr_0409 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas simiae WCS417 | 0.73 | PS417_08155 | | integration host factor subunit beta | 0.56 | PS417_01985 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas lactucae CFBP13502 | 0.73 | GEMAOFIL_01767 | | Integration host factor subunit beta | 0.56 | GEMAOFIL_00630 | | 3-dehydroquinate synthase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.73 | Pf6N2E2_2515 | | Integration host factor beta subunit | 0.55 | Pf6N2E2_3754 | | 3-dehydroquinate synthase (EC 4.2.3.4) | — | — |
| Pseudomonas sp. BP01 | 0.72 | JOY50_RS16120 | ihfB | integration host factor subunit beta | 0.55 | JOY50_RS09305 | aroB | 3-dehydroquinate synthase | — | — |
| Kangiella aquimarina DSM 16071 | 0.69 | B158DRAFT_2328 | | integration host factor, beta subunit | 0.46 | B158DRAFT_0764 | | 3-dehydroquinate synthase (EC 4.2.3.4) | — | — |
| Marinobacter adhaerens HP15 | 0.69 | HP15_1367 | | integration host factor, beta subunit | 0.55 | HP15_480 | | 3-dehydroquinate synthase | — | — |
| Rhodanobacter sp. FW510-T8 | 0.67 | OKGIIK_07260 | ihfB | integration host factor subunit beta | 0.41 | OKGIIK_11185 | aroB | 3-dehydroquinate synthase | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.67 | LRK54_RS18040 | | integration host factor subunit beta | 0.41 | LRK54_RS04310 | | 3-dehydroquinate synthase | — | — |
| Rhodanobacter sp000427505 FW510-R12 | 0.67 | LRK53_RS11320 | | integration host factor subunit beta | 0.42 | LRK53_RS05620 | | 3-dehydroquinate synthase | — | — |
| Rhodanobacter denitrificans MT42 | 0.67 | LRK55_RS17895 | | integration host factor subunit beta | 0.41 | LRK55_RS04085 | | 3-dehydroquinate synthase | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.67 | ABZR86_RS05560 | | integration host factor subunit beta | 0.42 | ABZR86_RS10480 | | 3-dehydroquinate synthase | — | — |
| Lysobacter sp. OAE881 | 0.66 | ABIE51_RS09350 | | integration host factor subunit beta | 0.44 | ABIE51_RS16100 | | 3-dehydroquinate synthase | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.66 | Xcc-8004.2382.1 | | Integration host factor beta subunit | 0.42 | Xcc-8004.1615.1 | | 3-dehydroquinate synthase (EC 4.2.3.4) | — | — |
| Dechlorosoma suillum PS | 0.62 | Dsui_1944 | | integration host factor, beta subunit | 0.54 | Dsui_1095 | | 3-dehydroquinate synthase | — | — |
| Methylophilus sp. DMC18 | 0.60 | GFF735 | | Integration host factor subunit beta | 0.57 | GFF2236 | | 3-dehydroquinate synthase | — | — |
| Acinetobacter baumannii LAC-4 | 0.58 | RR41_RS12140 | | integration host factor subunit beta | 0.53 | RR41_RS01585 | | 3-dehydroquinate synthase | — | — |
| Acinetobacter radioresistens SK82 | 0.58 | MPMX26_01237 | | Integration host factor subunit beta | 0.52 | MPMX26_02810 | | 3-dehydroquinate synthase | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.55 | H281DRAFT_03919 | | integration host factor subunit beta | 0.52 | H281DRAFT_05615 | | 3-dehydroquinate synthase | — | — |
| Paraburkholderia graminis OAS925 | 0.55 | ABIE53_003151 | | integration host factor subunit beta | 0.53 | ABIE53_003740 | | 3-dehydroquinate synthase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.55 | QEN71_RS04100 | | integration host factor subunit beta | 0.53 | QEN71_RS28035 | | 3-dehydroquinate synthase | — | — |
| Burkholderia phytofirmans PsJN | 0.55 | BPHYT_RS14880 | | integration host factor subunit beta | 0.52 | BPHYT_RS17885 | | 3-dehydroquinate synthase | low | > 109 |
| Magnetospirillum magneticum AMB-1 | 0.54 | AMB_RS20265 | | integration host factor subunit beta | 0.39 | AMB_RS19865 | | 3-dehydroquinate synthase | — | — |
| Variovorax sp. OAS795 | 0.51 | ABID97_RS09495 | | integration host factor subunit beta | 0.51 | ABID97_RS23255 | | 3-dehydroquinate synthase | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.51 | A4249_RS10895 | | integration host factor subunit beta | 0.40 | A4249_RS04175 | | 3-dehydroquinate synthase | — | — |
| Variovorax sp. SCN45 | 0.51 | GFF6178 | | Integration host factor beta subunit | 0.49 | GFF5325 | | 3-dehydroquinate synthase (EC 4.2.3.4) | — | — |
| Caulobacter crescentus NA1000 | 0.51 | CCNA_03701 | | integration host factor beta-subunit | 0.42 | CCNA_03104 | | 3-dehydroquinate synthase | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.51 | CCNA_03701 | | integration host factor beta-subunit | 0.42 | CCNA_03104 | | 3-dehydroquinate synthase | low | > 67 |
| Azospirillum brasilense Sp245 | 0.50 | AZOBR_RS03110 | | integration host factor subunit beta | 0.40 | AZOBR_RS03220 | | 3-dehydroquinate synthase | — | — |
| Sinorhizobium meliloti 1021 | 0.50 | SMc01134 | | integration host factor subunit beta | 0.39 | SMc00696 | | 3-dehydroquinate synthase | — | — |
| Rhizobium sp. OAE497 | 0.50 | ABIE40_RS01835 | | integration host factor subunit beta | 0.40 | ABIE40_RS17670 | | 3-dehydroquinate synthase | — | — |
| Azospirillum sp. SherDot2 | 0.50 | MPMX19_02383 | | Integration host factor subunit beta | 0.39 | MPMX19_02639 | | 3-dehydroquinate synthase | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.50 | GFF5347 | | Integration host factor beta subunit | 0.51 | GFF1331 | | 3-dehydroquinate synthase (EC 4.2.3.4) | — | — |
| Agrobacterium fabrum C58 | 0.49 | Atu0338 | | integration host factor, beta subunit | 0.40 | Atu3625 | | 3-dehydroquinate synthase | — | — |
| Rhodopseudomonas palustris CGA009 | 0.49 | TX73_000345 | | integration host factor subunit beta | 0.38 | TX73_002610 | | 3-dehydroquinate synthase | — | — |
| Rhodospirillum rubrum S1H | 0.49 | Rru_A0292 | | Integration host factor, beta subunit (NCBI) | 0.42 | Rru_A3741 | | 3-dehydroquinate synthase (NCBI) | — | — |
| Phaeobacter inhibens DSM 17395 | 0.49 | PGA1_c04840 | | integration host factor subunit beta | 0.39 | PGA1_c14100 | | 3-dehydroquinate synthase AroB | — | — |
| Dinoroseobacter shibae DFL-12 | 0.48 | Dshi_1027 | | integration host factor, beta subunit (RefSeq) | 0.38 | Dshi_1608 | | 3-dehydroquinate synthase (RefSeq) | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.47 | Ga0059261_3896 | | integration host factor, beta subunit | 0.38 | Ga0059261_3591 | | 3-dehydroquinate synthase (EC 4.2.3.4) | — | — |
| Sphingobium sp. HT1-2 | 0.45 | GFF1648 | | Integration host factor beta subunit | 0.41 | GFF2420 | | 3-dehydroquinate synthase (EC 4.2.3.4) | — | — |
| Parabacteroides merdae CL09T00C40 | 0.30 | HMPREF1078_RS14170 | | HU family DNA-binding protein | 0.23 | HMPREF1078_RS04395 | | 3-dehydroquinate synthase | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.29 | Echvi_1249 | | Bacterial nucleoid DNA-binding protein | 0.21 | Echvi_0121 | | 3-dehydroquinate synthase | — | — |
Not shown: 5 genomes with orthologs for GFF3669 only; 15 genomes with orthologs for GFF630 only