Conservation of cofitness between GFF4076 and GFF5062 in Sphingobium sp. HT1-2

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF4076 Two-component transcriptional response regulator, LuxR family 1.0 GFF5062 Flavohemoglobin / Nitric oxide dioxygenase (EC 1.14.12.17) low > 95
Sinorhizobium meliloti 1021 0.72 SMc00458 transcriptional regulator 0.41 SMa1191 nitric oxide dioxygenase low > 103
Azospirillum sp. SherDot2 0.71 MPMX19_04078 Virulence transcriptional regulatory protein PhoP 0.35 MPMX19_06072 Flavohemoprotein low > 112
Vibrio cholerae E7946 ATCC 55056 0.59 CSW01_08235 DNA-binding response regulator 0.33 CSW01_14905 flavohemoprotein low > 62
Shewanella sp. ANA-3 0.53 Shewana3_4025 two component transcriptional regulator (RefSeq) 0.38 Shewana3_3174 globin (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.51 MIT1002_01421 Transcriptional regulatory protein PhoP 0.32 MIT1002_03244 Nitric oxide dioxygenase low > 70
Pseudomonas segetis P6 0.50 MPMX49_02578 Transcriptional regulatory protein QseB 0.38 MPMX49_01764 Flavohemoprotein low > 75
Pseudomonas aeruginosa PA14 0.48 IKLFDK_13340 two-component system response regulator CarR 0.35 IKLFDK_13380 NO-inducible flavohemoprotein low > 100
Pseudomonas stutzeri RCH2 0.47 Psest_3533 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.37 Psest_1174 Hemoglobin-like flavoprotein low > 67
Pseudomonas sp. DMC3 0.47 GFF1365 Transcriptional regulatory protein QseB 0.36 GFF4397 Flavohemoprotein low > 89
Pseudomonas sp. SVBP6 0.47 COO64_RS17260 response regulator transcription factor 0.35 COO64_RS11345 hmpA NO-inducible flavohemoprotein low > 93
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_19775 transcriptional regulator 0.34 AO353_15440 dihydropteridine reductase low > 101
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_2451 Two-component system response regulator QseB 0.35 PfGW456L13_4938 Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17) low > 87
Pseudomonas putida KT2440 0.46 PP_2347 DNA-binding response regulator 0.35 PP_0808 Flavohemoprotein low > 96
Pseudomonas sp. S08-1 0.46 OH686_00055 Two-component system response regulator QseB 0.37 OH686_12115 Flavohemoglobin / Nitric oxide dioxygenase low > 80
Pseudomonas sp. BP01 0.46 JOY50_RS10885 response regulator transcription factor 0.34 JOY50_RS23010 hmpA NO-inducible flavohemoprotein low > 84
Pseudomonas lactucae CFBP13502 0.46 GEMAOFIL_02165 Transcriptional regulatory protein QseB 0.34 GEMAOFIL_04827 Flavohemoprotein low > 93
Pseudomonas fluorescens SBW25 0.46 PFLU_RS10435 response regulator transcription factor 0.34 PFLU_RS25230 NO-inducible flavohemoprotein low > 109
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS10435 response regulator transcription factor 0.34 PFLU_RS25230 NO-inducible flavohemoprotein low > 109
Pseudomonas simiae WCS417 0.46 PS417_10270 transcriptional regulator 0.34 PS417_23400 dihydropteridine reductase low > 88
Pseudomonas sp. RS175 0.46 PFR28_02847 Transcriptional regulatory protein QseB 0.34 PFR28_00240 Flavohemoprotein low > 88
Pseudomonas fluorescens FW300-N1B4 0.46 Pf1N1B4_105 Two-component system response regulator QseB 0.34 Pf1N1B4_925 Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17) — —
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_41 Two-component system response regulator QseB 0.34 Pf6N2E2_5315 Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17) 0.17 97
Pseudomonas fluorescens FW300-N2C3 0.46 AO356_21280 transcriptional regulator 0.33 AO356_16950 dihydropteridine reductase low > 104
Cupriavidus basilensis FW507-4G11 0.44 RR42_RS30345 XRE family transcriptional regulator 0.30 RR42_RS09175 flavohemoprotein low > 128
Enterobacter asburiae PDN3 0.44 EX28DRAFT_3057 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.39 EX28DRAFT_0098 Hemoglobin-like flavoprotein/Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 low > 76
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS21985 transcriptional regulator 0.33 HSERO_RS12535 dihydropteridine reductase low > 78
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.44 GFF3138 Two-component system response regulator QseB 0.37 GFF2449 Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17) low > 78
Rahnella sp. WP5 0.43 EX31_RS08605 two-component system response regulator PmrA 0.36 EX31_RS20590 NO-inducible flavohemoprotein low > 89
Klebsiella michiganensis M5al 0.43 BWI76_RS24335 two-component system response regulator QseB 0.39 BWI76_RS21240 flavohemoprotein low > 92
Escherichia coli BW25113 0.42 b3025 qseB DNA-binding response regulator in two-component regulatory system with QseC (NCBI) 0.38 b2552 hmp fused nitric oxide dioxygenase/dihydropteridine reductase 2 (NCBI) low > 76
Enterobacter sp. TBS_079 0.42 MPMX20_03863 Transcriptional regulatory protein QseB 0.38 MPMX20_03421 Flavohemoprotein low > 85
Hydrogenophaga sp. GW460-11-11-14-LB1 0.42 GFF700 Two-component system response regulator QseB 0.40 GFF5814 Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17) low > 90
Escherichia coli HS(pFamp)R (ATCC 700891) 0.42 OHPLBJKB_00677 Transcriptional regulatory protein QseB 0.38 OHPLBJKB_01155 Flavohemoprotein low > 74
Erwinia tracheiphila SCR3 0.42 LU632_RS21175 pmrA two-component system response regulator PmrA 0.32 LU632_RS17920 hmpA NO-inducible flavohemoprotein low > 74
Erwinia tracheiphila HP pepo 2.2 0.42 IJEDHG_13855 pmrA two-component system response regulator PmrA 0.32 IJEDHG_02920 hmpA NO-inducible flavohemoprotein low > 61
Escherichia coli BL21 0.42 ECD_02897 quorum sensing DNA-binding response regulator in two-component regulatory system with QseC 0.38 ECD_02444 fused nitric oxide dioxygenase/dihydropteridine reductase 2 low > 61
Escherichia coli ECOR38 0.42 HEPCGN_17740 Quorum sensing DNA-binding response regulator in two-component regulatory system with QseC 0.38 HEPCGN_20650 hmpA NO-inducible flavohemoprotein low > 88
Escherichia fergusonii Becca 0.42 EFB2_00788 Transcriptional regulatory protein QseB 0.38 EFB2_01344 Flavohemoprotein low > 86
Escherichia coli ECRC100 0.42 OKFHMN_18880 Transcriptional regulatory protein QseB 0.38 OKFHMN_21505 hmpA NO-inducible flavohemoprotein low > 79
Escherichia coli ECRC62 0.42 BNILDI_00855 Transcriptional regulatory protein QseB 0.38 BNILDI_11980 hmpA NO-inducible flavohemoprotein low > 75
Escherichia coli ECRC99 0.42 KEDOAH_09265 Transcriptional regulatory protein QseB 0.38 KEDOAH_06715 hmpA NO-inducible flavohemoprotein — —
Escherichia coli ECRC98 0.42 JDDGAC_22515 Transcriptional regulatory protein QseB 0.38 JDDGAC_25170 hmpA NO-inducible flavohemoprotein low > 87
Escherichia coli ECRC101 0.42 MCAODC_09395 Transcriptional regulatory protein QseB 0.38 MCAODC_12035 hmpA NO-inducible flavohemoprotein low > 88
Escherichia coli ECOR27 0.42 NOLOHH_10660 Transcriptional regulatory protein QseB 0.38 NOLOHH_13180 hmpA NO-inducible flavohemoprotein low > 76
Pectobacterium carotovorum WPP14 0.42 HER17_RS11640 two-component system response regulator PhoP 0.36 HER17_RS05945 NO-inducible flavohemoprotein low > 75
Escherichia coli ECRC102 0.42 NIAGMN_16645 Transcriptional regulatory protein QseB 0.38 NIAGMN_19275 hmpA NO-inducible flavohemoprotein low > 80
Escherichia coli Nissle 1917 0.42 ECOLIN_RS17425 quorum sensing response regulator transcription factor QseB 0.38 ECOLIN_RS14445 NO-inducible flavohemoprotein low > 55
Klebsiella pneumoniae MKP103 0.41 KDGMDA_05180 two-component system response regulator QseB 0.38 KDGMDA_28360 NO-inducible flavohemoprotein low > 95
Serratia liquefaciens MT49 0.41 IAI46_10395 two-component system response regulator PhoP 0.39 IAI46_19400 NO-inducible flavohemoprotein low > 86
Ralstonia solanacearum PSI07 0.40 RPSI07_RS08050 DNA-binding response regulator 0.29 RPSI07_RS08070 flavohemoprotein low > 81
Echinicola vietnamensis KMM 6221, DSM 17526 0.40 Echvi_4209 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.35 Echvi_4494 Hemoglobin-like flavoprotein low > 79

Not shown: 33 genomes with orthologs for GFF4076 only; 17 genomes with orthologs for GFF5062 only