Conservation of cofitness between GFF2976 and GFF484 in Sphingobium sp. HT1-2

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF2976 RND efflux system, membrane fusion protein 1.0 GFF484 Predicted carboxypeptidase 0.70 20
Sphingomonas koreensis DSMZ 15582 0.46 Ga0059261_1851 RND family efflux transporter, MFP subunit 0.65 Ga0059261_0689 Predicted carboxypeptidase low > 68
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_23965 RND transporter MFP subunit 0.41 AO353_20320 hypothetical protein low > 101
Pseudomonas fluorescens FW300-N1B4 0.31 Pf1N1B4_4865 Multidrug efflux membrane fusion protein MexE 0.40 Pf1N1B4_3981 Predicted carboxypeptidase low > 87
Pseudomonas sp. DMC3 0.31 GFF2877 Efflux pump periplasmic linker BepF 0.41 GFF1468 hypothetical protein low > 89
Pseudomonas segetis P6 0.31 MPMX49_02402 Efflux pump periplasmic linker BepF 0.43 MPMX49_03622 hypothetical protein low > 75
Pseudomonas fluorescens GW456-L13 0.30 PfGW456L13_3061 Multidrug efflux membrane fusion protein MexE 0.40 PfGW456L13_2585 Predicted carboxypeptidase low > 87
Pseudomonas fluorescens SBW25 0.30 PFLU_RS14265 efflux RND transporter periplasmic adaptor subunit 0.39 PFLU_RS18995 carboxypeptidase family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.30 PFLU_RS14265 efflux RND transporter periplasmic adaptor subunit 0.39 PFLU_RS18995 carboxypeptidase family protein low > 109
Ralstonia solanacearum GMI1000 0.30 RS_RS22485 MexE family multidrug efflux RND transporter periplasmic adaptor subunit 0.44 RS_RS10090 hypothetical protein low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.29 Psyr_2967 Secretion protein HlyD 0.42 Psyr_3024 Peptidase M14, carboxypeptidase A low > 86
Pseudomonas syringae pv. syringae B728a 0.29 Psyr_2967 Secretion protein HlyD 0.42 Psyr_3024 Peptidase M14, carboxypeptidase A low > 86
Pseudomonas simiae WCS417 0.29 PS417_13195 RND transporter MFP subunit 0.40 PS417_17045 hypothetical protein low > 88
Cupriavidus basilensis FW507-4G11 0.29 RR42_RS27680 MexE family multidrug efflux RND transporter periplasmic adaptor subunit 0.44 RR42_RS05785 hypothetical protein low > 128
Pseudomonas sp. SVBP6 0.29 COO64_RS25185 mexE multidrug efflux RND transporter periplasmic adaptor subunit MexE 0.39 COO64_RS24720 M14-type cytosolic carboxypeptidase low > 93
Pseudomonas lactucae CFBP13502 0.29 GEMAOFIL_03222 Efflux pump periplasmic linker BepF 0.39 GEMAOFIL_03719 hypothetical protein low > 96
Rhizobium sp. OAE497 0.29 ABIE40_RS14880 efflux RND transporter periplasmic adaptor subunit 0.31 ABIE40_RS22520 M14-type cytosolic carboxypeptidase low > 107
Pseudomonas sp. RS175 0.29 PFR28_01729 Efflux pump periplasmic linker BepF 0.42 PFR28_01254 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.29 AO356_27600 RND transporter MFP subunit 0.40 AO356_01610 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_825 Multidrug efflux membrane fusion protein MexE 0.41 Pf6N2E2_2197 Predicted carboxypeptidase 0.15 55
Pseudomonas orientalis W4I3 0.29 QF045_RS16755 efflux RND transporter periplasmic adaptor subunit 0.39 QF045_RS18725 M14-type cytosolic carboxypeptidase low > 93
Shewanella sp. ANA-3 0.28 Shewana3_1077 RND family efflux transporter MFP subunit (RefSeq) 0.47 Shewana3_1960 peptidase M14, carboxypeptidase A (RefSeq) low > 73
Paraburkholderia bryophila 376MFSha3.1 0.28 H281DRAFT_03189 membrane fusion protein, multidrug efflux system 0.42 H281DRAFT_04600 Murein tripeptide amidase MpaA low > 103
Pseudomonas putida KT2440 0.28 PP_3425 Efflux transporter RND family, MFP subunit 0.39 PP_2364 conserved protein of unknown function low > 96
Pseudomonas sp. BP01 0.28 JOY50_RS24345 mexE multidrug efflux RND transporter periplasmic adaptor subunit MexE 0.39 JOY50_RS10795 M14-type cytosolic carboxypeptidase low > 84
Paraburkholderia sabiae LMG 24235 0.28 QEN71_RS20100 efflux RND transporter periplasmic adaptor subunit 0.41 QEN71_RS23995 M14-type cytosolic carboxypeptidase low > 153
Burkholderia phytofirmans PsJN 0.28 BPHYT_RS22510 MexE family multidrug efflux RND transporter periplasmic adaptor subunit 0.42 BPHYT_RS06785 hypothetical protein low > 109
Pseudomonas aeruginosa PUPa3 0.27 DQ20_RS36065 mexE;inference=COORDINATES multidrug efflux RND transporter periplasmic adaptor subunit MexE 0.41 DQ20_RS32755 M14-type cytosolic carboxypeptidase low > 101
Pseudomonas aeruginosa MRSN321 0.27 DY961_RS05190 mexE;inference=COORDINATES multidrug efflux RND transporter periplasmic adaptor subunit MexE 0.41 DY961_RS02840 M14-type cytosolic carboxypeptidase low > 100
Pseudomonas aeruginosa PA14 0.27 IKLFDK_12245 MexE family multidrug efflux RND transporter periplasmic adaptor subunit 0.41 IKLFDK_14380 hypothetical protein low > 98
Alteromonas macleodii MIT1002 0.27 MIT1002_02999 Efflux pump periplasmic linker BepF 0.47 MIT1002_02393 Zinc carboxypeptidase low > 70

Not shown: 37 genomes with orthologs for GFF2976 only; 9 genomes with orthologs for GFF484 only