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  • Conservation of cofitness between GFF4087 and GFF4079 in Sphingobium sp. HT1-2

    6 genomes with putative orthologs of both genes

    Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
    Sphingobium sp. HT1-2 1.0 GFF4087 hypothetical protein 1.0 GFF4079 Protein of unknown function DUF541 0.76 7
    Caulobacter crescentus NA1000 Δfur 0.46 CCNA_03467 zinc-dependent metalloprotease, MMP subfamily 2 0.34 CCNA_02378 SIMPL family protein low > 67
    Caulobacter crescentus NA1000 0.46 CCNA_03467 zinc-dependent metalloprotease, MMP subfamily 2 0.34 CCNA_02378 SIMPL family protein low > 66
    Pontibacter actiniarum KMM 6156, DSM 19842 0.33 CA264_08900 peptidase 0.17 CA264_08325 SIMPL domain-containing protein 0.33 46
    Shewanella oneidensis MR-1 0.28 SO0578 hypothetical protein (NCBI ptt file) 0.15 SO4070 conserved hypothetical protein (NCBI ptt file) low > 76
    Shewanella loihica PV-4 0.28 Shew_0460 hypothetical protein (RefSeq) 0.17 Shew_3168 hypothetical protein (RefSeq) low > 60
    Shewanella sp. ANA-3 0.28 Shewana3_0577 hypothetical protein (RefSeq) 0.16 Shewana3_3626 hypothetical protein (RefSeq) low > 73

    Not shown: 4 genomes with orthologs for GFF4087 only; 33 genomes with orthologs for GFF4079 only