Conservation of cofitness between GFF996 and GFF4066 in Sphingobium sp. HT1-2

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF996 Tol-Pal system peptidoglycan-associated lipoprotein PAL 1.0 GFF4066 Nitronate monooxygenase (EC 1.13.12.16) 0.67 5
Sphingomonas koreensis DSMZ 15582 0.61 Ga0059261_3156 peptidoglycan-associated lipoprotein 0.23 Ga0059261_2760 Dioxygenases related to 2-nitropropane dioxygenase low > 68
Azospirillum brasilense Sp245 0.49 AZOBR_RS09080 outer membrane lipoprotein of the Pal-Tol system 0.23 AZOBR_RS09570 2-nitropropane dioxygenase — —
Azospirillum sp. SherDot2 0.48 MPMX19_00704 Peptidoglycan-associated lipoprotein 0.24 MPMX19_00643 Nitronate monooxygenase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.44 A4249_RS15925 peptidoglycan-associated lipoprotein Pal 0.66 A4249_RS04185 nitronate monooxygenase — —
Klebsiella pneumoniae MKP103 0.41 KDGMDA_16795 peptidoglycan-associated lipoprotein Pal 0.51 KDGMDA_21680 nitronate monooxygenase low > 95
Klebsiella michiganensis M5al 0.41 BWI76_RS08540 hypothetical protein 0.51 BWI76_RS15040 putative 2-nitropropane dioxygenase — —
Rhodopseudomonas palustris CGA009 0.40 TX73_005770 peptidoglycan-associated lipoprotein Pal 0.28 TX73_016095 nitronate monooxygenase family protein — —
Xanthobacter sp. DMC5 0.39 GFF94 Peptidoglycan-associated lipoprotein 0.25 GFF501 Nitronate monooxygenase — —
Phaeobacter inhibens DSM 17395 0.37 PGA1_c05940 putative peptidoglycan-associated lipoprotein 0.47 PGA1_c04630 2-nitropropane dioxygenase — —
Rhizobium sp. OAE497 0.36 ABIE40_RS15595 peptidoglycan-associated lipoprotein Pal 0.31 ABIE40_RS25330 nitronate monooxygenase — —
Acinetobacter baumannii LAC-4 0.34 RR41_RS04650 peptidoglycan-associated lipoprotein Pal 0.41 RR41_RS05000 nitronate monooxygenase low > 55
Xanthomonas campestris pv. campestris strain 8004 0.33 Xcc-8004.1447.1 hypothetical protein 0.18 Xcc-8004.3771.1 2-nitropropane dioxygenase — —
Lysobacter sp. OAE881 0.33 ABIE51_RS05090 peptidoglycan-associated lipoprotein Pal 0.29 ABIE51_RS01420 nitronate monooxygenase — —
Shewanella oneidensis MR-1 0.33 SO2747 pal peptidoglycan-associated lipoprotein (NCBI ptt file) 0.35 SO0471 hypothetical dioxygenase (NCBI ptt file) — —
Shewanella loihica PV-4 0.33 Shew_1528 OmpA domain-containing protein (RefSeq) 0.25 Shew_1878 2-nitropropane dioxygenase, NPD (RefSeq) low > 60
Shewanella sp. ANA-3 0.33 Shewana3_2530 OmpA/MotB domain-containing protein (RefSeq) 0.34 Shewana3_0474 2-nitropropane dioxygenase, NPD (RefSeq) — —
Acinetobacter radioresistens SK82 0.32 MPMX26_02195 Peptidoglycan-associated lipoprotein 0.42 MPMX26_02126 Nitronate monooxygenase low > 36
Shewanella amazonensis SB2B 0.32 Sama_2085 peptidoglycan-associated lipoprotein (RefSeq) 0.26 Sama_2734 putative oxidoreductase protein (RefSeq) — —
Paraburkholderia bryophila 376MFSha3.1 0.31 H281DRAFT_04718 peptidoglycan-associated lipoprotein 0.30 H281DRAFT_02163 nitronate monooxygenase — —
Pseudomonas sp. RS175 0.31 PFR28_03406 Peptidoglycan-associated lipoprotein 0.32 PFR28_02495 Nitronate monooxygenase — —
Pseudomonas stutzeri RCH2 0.31 Psest_1503 peptidoglycan-associated lipoprotein 0.34 Psest_0407 Dioxygenases related to 2-nitropropane dioxygenase — —
Paraburkholderia graminis OAS925 0.31 ABIE53_000881 peptidoglycan-associated lipoprotein 0.30 ABIE53_000460 nitronate monooxygenase — —
Pseudomonas aeruginosa MRSN321 0.31 DY961_RS07565 pal;go_component=cell peptidoglycan-associated lipoprotein Pal 0.49 DY961_RS28500 nmoA;inference=COORDINATES nitronate monooxygenase — —
Pseudomonas aeruginosa PA14 0.31 IKLFDK_04405 peptidoglycan-associated lipoprotein Pal 0.49 IKLFDK_21635 Nitronate monooxygenase — —
Pseudomonas aeruginosa PUPa3 0.31 DQ20_RS45225 pal;go_component=cell peptidoglycan-associated lipoprotein Pal 0.49 DQ20_RS49340 nmoA;inference=COORDINATES nitronate monooxygenase — —
Pseudomonas sp. BP01 0.31 JOY50_RS01785 pal peptidoglycan-associated lipoprotein Pal 0.31 JOY50_RS04085 nitronate monooxygenase family protein — —
Pseudomonas putida KT2440 0.31 PP_1223 peptidoglycan-associated lipoprotein 0.30 PP_3827 2-nitropropane dioxygenase — —
Rhodanobacter sp000427505 FW510-R12 0.30 LRK53_RS05160 peptidoglycan-associated lipoprotein Pal 0.29 LRK53_RS07240 nitronate monooxygenase — —
Pseudomonas fluorescens FW300-N2E3 0.30 AO353_03550 peptidoglycan-binding protein 0.31 AO353_27025 2-nitropropane dioxygenase — —
Rhodanobacter sp. FW510-T8 0.30 OKGIIK_01880 pal peptidoglycan-associated lipoprotein Pal 0.28 OKGIIK_09760 2-nitropropane dioxygenase — —
Dyella japonica UNC79MFTsu3.2 0.30 ABZR86_RS10800 peptidoglycan-associated lipoprotein Pal 0.31 ABZR86_RS09065 nitronate monooxygenase — —
Variovorax sp. OAS795 0.30 ABID97_RS16690 peptidoglycan-associated lipoprotein Pal 0.32 ABID97_RS19675 nitronate monooxygenase low > 91
Herbaspirillum seropedicae SmR1 0.30 HSERO_RS06105 OmpA/MotB 0.43 HSERO_RS17250 2-nitropropane dioxygenase — —
Pseudomonas sp. SVBP6 0.30 COO64_RS20130 pal peptidoglycan-associated lipoprotein Pal 0.32 COO64_RS23005 nitronate monooxygenase family protein — —
Pseudomonas fluorescens FW300-N2E2 0.30 Pf6N2E2_5543 18K peptidoglycan-associated outer membrane lipoprotein; Peptidoglycan-associated lipoprotein precursor; Outer membrane protein P6; OmpA/MotB precursor 0.32 Pf6N2E2_433 Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9) — —
Pseudomonas simiae WCS417 0.30 PS417_22415 peptidoglycan-binding protein 0.29 PS417_14110 2-nitropropane dioxygenase — —
Pseudomonas sp. DMC3 0.30 GFF5178 Peptidoglycan-associated lipoprotein 0.30 GFF2956 Nitronate monooxygenase — —
Pseudomonas fluorescens FW300-N2C3 0.30 AO356_18055 peptidoglycan-binding protein 0.32 AO356_22745 2-nitropropane dioxygenase — —
Pseudomonas fluorescens GW456-L13 0.30 PfGW456L13_1859 18K peptidoglycan-associated outer membrane lipoprotein; Peptidoglycan-associated lipoprotein precursor; Outer membrane protein P6; OmpA/MotB precursor 0.29 PfGW456L13_2912 Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.30 Psyr_1416 OmpA/MotB 0.28 Psyr_2755 2-nitropropane dioxygenase, NPD — —
Pseudomonas syringae pv. syringae B728a 0.30 Psyr_1416 OmpA/MotB 0.28 Psyr_2755 2-nitropropane dioxygenase, NPD — —
Pseudomonas fluorescens SBW25 0.30 PFLU_RS24055 peptidoglycan-associated lipoprotein Pal 0.29 PFLU_RS14490 nitronate monooxygenase — —
Pseudomonas lactucae CFBP13502 0.30 GEMAOFIL_04635 Peptidoglycan-associated lipoprotein 0.30 GEMAOFIL_02917 Nitronate monooxygenase — —
Acidovorax sp. GW101-3H11 0.30 Ac3H11_2484 18K peptidoglycan-associated outer membrane lipoprotein; Peptidoglycan-associated lipoprotein precursor; Outer membrane protein P6; OmpA/MotB precursor 0.26 Ac3H11_3364 Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9) — —
Pseudomonas fluorescens SBW25-INTG 0.30 PFLU_RS24055 peptidoglycan-associated lipoprotein Pal 0.29 PFLU_RS14490 nitronate monooxygenase — —
Pseudomonas orientalis W4I3 0.30 QF045_RS24580 peptidoglycan-associated lipoprotein Pal 0.29 QF045_RS15840 nitronate monooxygenase — —
Pseudomonas segetis P6 0.29 ACVTMO_RS08390 pal peptidoglycan-associated lipoprotein Pal 0.47 ACVTMO_RS08760 NAD(P)H-dependent flavin oxidoreductase — —
Ralstonia sp. UNC404CL21Col 0.29 ABZR87_RS08990 peptidoglycan-associated lipoprotein Pal 0.28 ABZR87_RS22515 nitronate monooxygenase family protein low > 80
Cupriavidus basilensis FW507-4G11 0.29 RR42_RS15455 membrane protein 0.49 RR42_RS31520 2-nitropropane dioxygenase low > 128
Ralstonia solanacearum PSI07 0.29 RPSI07_RS20295 peptidoglycan-associated lipoprotein Pal 0.26 RPSI07_RS01265 DUF561 domain-containing protein low > 81
Ralstonia solanacearum GMI1000 0.29 RS_RS03705 peptidoglycan-associated lipoprotein Pal 0.27 RS_RS18620 DUF561 domain-containing protein — —
Ralstonia solanacearum IBSBF1503 0.29 RALBFv3_RS12930 peptidoglycan-associated lipoprotein 0.24 RALBFv3_RS21930 DUF561 domain-containing protein low > 76
Ralstonia solanacearum UW163 0.29 UW163_RS00635 peptidoglycan-associated lipoprotein 0.24 UW163_RS17255 DUF561 domain-containing protein — —
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS04870 peptidoglycan-associated lipoprotein Pal 0.29 LRK54_RS02705 nitronate monooxygenase — —
Rhodanobacter denitrificans MT42 0.29 LRK55_RS04650 peptidoglycan-associated lipoprotein Pal 0.29 LRK55_RS02460 nitronate monooxygenase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.29 GFF4535 18K peptidoglycan-associated outer membrane lipoprotein; Peptidoglycan-associated lipoprotein precursor; Outer membrane protein P6; OmpA/MotB precursor 0.29 GFF1831 Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9) low > 90

Not shown: 43 genomes with orthologs for GFF996 only; 8 genomes with orthologs for GFF4066 only