Conservation of cofitness between PS417_27035 and PS417_20160 in Pseudomonas simiae WCS417

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_27035 FAD-linked oxidase 1.0 PS417_20160 cysteine synthase 0.53 11
Pseudomonas fluorescens SBW25 0.99 PFLU_RS28690 FAD-binding oxidoreductase 0.98 PFLU_RS22105 cysteine synthase CysM low > 109
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS28690 FAD-binding oxidoreductase 0.98 PFLU_RS22105 cysteine synthase CysM low > 109
Pseudomonas orientalis W4I3 0.99 QF045_RS01425 FAD-binding oxidoreductase 0.98 QF045_RS22270 cysteine synthase CysM — —
Pseudomonas lactucae CFBP13502 0.99 GEMAOFIL_05547 putative FAD-linked oxidoreductase 0.98 GEMAOFIL_04225 Cysteine synthase B — —
Pseudomonas fluorescens GW456-L13 0.97 PfGW456L13_944 D-2-hydroxyglutarate dehydrogenase 0.92 PfGW456L13_2032 Cysteine synthase B (EC 2.5.1.47) 0.59 4
Pseudomonas fluorescens FW300-N1B4 0.97 Pf1N1B4_2274 D-2-hydroxyglutarate dehydrogenase 0.92 Pf1N1B4_3506 Cysteine synthase B (EC 2.5.1.47) low > 87
Pseudomonas fluorescens FW300-N2E2 0.97 Pf6N2E2_3933 D-2-hydroxyglutarate dehydrogenase 0.93 Pf6N2E2_5721 Cysteine synthase B (EC 2.5.1.47) — —
Pseudomonas fluorescens FW300-N2C3 0.97 AO356_10305 FAD-linked oxidase 0.93 AO356_19050 cysteine synthase low > 104
Pseudomonas fluorescens FW300-N2E3 0.97 AO353_08505 FAD-linked oxidase 0.93 AO353_02720 cysteine synthase 0.52 28
Pseudomonas sp. DMC3 0.96 GFF273 putative FAD-linked oxidoreductase 0.92 GFF4820 Cysteine synthase B low > 89
Pseudomonas sp. RS175 0.96 PFR28_04841 putative FAD-linked oxidoreductase 0.93 PFR28_03225 Cysteine synthase B — —
Pseudomonas stutzeri RCH2 0.91 Psest_3872 FAD/FMN-containing dehydrogenases 0.88 Psest_1638 cysteine synthase B — —
Pseudomonas segetis P6 0.91 MPMX49_00576 putative FAD-linked oxidoreductase 0.85 MPMX49_01652 Cysteine synthase B — —
Pseudomonas sp. SVBP6 0.91 COO64_RS12645 FAD-binding oxidoreductase 0.92 COO64_RS07335 cysM cysteine synthase CysM low > 93
Pseudomonas aeruginosa MRSN321 0.90 DY961_RS21540 FAD-binding oxidoreductase 0.88 DY961_RS07785 cysM;go_function=cysteine cysteine synthase B low > 100
Pseudomonas aeruginosa PA14 0.90 IKLFDK_23855 FAD-binding oxidoreductase 0.88 IKLFDK_04190 cysteine synthase B low > 98
Pseudomonas aeruginosa PUPa3 0.90 DQ20_RS37750 FAD-binding oxidoreductase 0.88 DQ20_RS45010 cysM;go_function=cysteine cysteine synthase B low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.90 Psyr_4851 FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal 0.91 Psyr_3697 cysteine synthase — —
Pseudomonas syringae pv. syringae B728a 0.90 Psyr_4851 FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal 0.91 Psyr_3697 cysteine synthase — —
Pseudomonas sp. S08-1 0.90 OH686_11285 D-2-hydroxyglutarate dehydrogenase 0.82 OH686_18950 cysteine synthase B — —
Pseudomonas sp. BP01 0.88 JOY50_RS20620 FAD-binding oxidoreductase 0.92 JOY50_RS23900 cysM cysteine synthase CysM low > 84
Pseudomonas putida KT2440 0.87 PP_5154 putative Oxidoreductase, FAD-binding 0.92 PP_1654 cysteine synthase B low > 96
Marinobacter adhaerens HP15 0.72 HP15_2553 oxidoreductase, FAD-binding protein 0.75 HP15_789 cysteine synthase B — —
Acinetobacter radioresistens SK82 0.71 MPMX26_02772 putative FAD-linked oxidoreductase 0.69 MPMX26_00536 Cysteine synthase B — —
Acinetobacter baumannii LAC-4 0.70 RR41_RS01770 FAD-binding oxidoreductase 0.66 RR41_RS16095 cysteine synthase CysM — —
Kangiella aquimarina DSM 16071 0.60 B158DRAFT_1492 FAD/FMN-containing dehydrogenases 0.33 B158DRAFT_1208 cystathionine beta-synthase (acetylserine-dependent) (EC 4.2.1.-) 0.68 18
Rhodanobacter denitrificans MT42 0.55 LRK55_RS02930 FAD-binding oxidoreductase 0.34 LRK55_RS00680 cysteine synthase A low > 63
Rhodanobacter denitrificans FW104-10B01 0.55 LRK54_RS03180 FAD-binding oxidoreductase 0.34 LRK54_RS00905 cysteine synthase A 0.66 13
Variovorax sp. SCN45 0.32 GFF3000 D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.2) 0.68 GFF6025 Cysteine synthase B (EC 2.5.1.47) — —
Herbaspirillum seropedicae SmR1 0.32 HSERO_RS16560 2-hydroxyacid dehydrogenase 0.68 HSERO_RS04915 cysteine synthase — —
Variovorax sp. OAS795 0.32 ABID97_RS10060 FAD-binding oxidoreductase 0.67 ABID97_RS07880 cysteine synthase CysM — —
Burkholderia phytofirmans PsJN 0.32 BPHYT_RS13750 D-2-hydroxyacid dehydrogenase 0.66 BPHYT_RS14845 cysteine synthase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.32 H281DRAFT_04480 FAD/FMN-containing dehydrogenase 0.67 H281DRAFT_03911 cysteine synthase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.31 GFF5251 D-2-hydroxyglutarate dehydrogenase 0.67 GFF709 Cysteine synthase B (EC 2.5.1.47) low > 90
Paraburkholderia sabiae LMG 24235 0.31 QEN71_RS05170 FAD-binding oxidoreductase 0.68 QEN71_RS04135 cysteine synthase CysM — —
Acidovorax sp. GW101-3H11 0.31 Ac3H11_2934 D-2-hydroxyglutarate dehydrogenase 0.66 Ac3H11_644 Cysteine synthase B (EC 2.5.1.47) — —
Castellaniella sp019104865 MT123 0.30 ABCV34_RS09275 FAD-binding oxidoreductase 0.62 ABCV34_RS07055 cysteine synthase CysM — —
Paraburkholderia graminis OAS925 0.30 ABIE53_002925 FAD/FMN-containing dehydrogenase 0.64 ABIE53_003144 cysteine synthase B low > 113
Cupriavidus basilensis FW507-4G11 0.30 RR42_RS06435 2-hydroxyacid dehydrogenase 0.67 RR42_RS04535 cysteine synthase low > 128
Ralstonia solanacearum GMI1000 0.29 RS_RS07835 FAD-binding oxidoreductase 0.69 RS_RS04560 cysteine synthase CysM — —
Ralstonia sp. UNC404CL21Col 0.29 ABZR87_RS13840 FAD-binding oxidoreductase 0.67 ABZR87_RS09515 cysteine synthase CysM low > 80
Dechlorosoma suillum PS 0.29 Dsui_2542 FAD/FMN-dependent dehydrogenase 0.70 Dsui_1954 cysteine synthase B — —
Ralstonia solanacearum PSI07 0.29 RPSI07_RS15590 FAD-binding oxidoreductase 0.68 RPSI07_RS19645 cysteine synthase CysM — —
Ralstonia solanacearum IBSBF1503 0.29 RALBFv3_RS01900 FAD-binding oxidoreductase 0.68 RALBFv3_RS13825 cysteine synthase CysM — —
Ralstonia solanacearum UW163 0.29 UW163_RS15210 FAD-binding oxidoreductase 0.68 UW163_RS15985 cysteine synthase CysM — —
Pedobacter sp. GW460-11-11-14-LB5 0.28 CA265_RS09620 FAD-binding oxidoreductase 0.55 CA265_RS10150 cysteine synthase B low > 88
Mucilaginibacter yixingensis YX-36 DSM 26809 0.27 ABZR88_RS06545 FAD-binding oxidoreductase 0.53 ABZR88_RS13695 cysteine synthase CysM — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.25 CA264_13425 FAD-binding oxidoreductase 0.58 CA264_08940 cysteine synthase B low > 74
Escherichia coli Nissle 1917 0.18 ECOLIN_RS17140 glycolate oxidase subunit GlcD 0.70 ECOLIN_RS13900 cysteine synthase B — —
Escherichia coli BL21 0.18 ECD_02848 glycolate oxidase subunit, FAD-linked 0.69 ECD_02321 cysteine synthase B (O-acetylserine sulfhydrolase B) low > 61
Escherichia coli ECOR38 0.18 HEPCGN_17995 glcD glycolate oxidase subunit GlcD 0.70 HEPCGN_21345 cysM cysteine synthase B low > 88
Escherichia coli ECRC62 0.18 BNILDI_00595 glcD glycolate oxidase subunit GlcD 0.69 BNILDI_12715 cysM cysteine synthase B low > 75
Escherichia coli BW25113 0.18 b2979 glcD glycolate dehydrogenase, putative FAD-linked subunit (from data) 0.70 b2421 cysM cysteine synthase B (O-acetylserine sulfhydrolase B) (NCBI) low > 76
Escherichia coli ECOR27 0.18 NOLOHH_10920 glcD glycolate oxidase subunit GlcD 0.69 NOLOHH_13850 cysM cysteine synthase B low > 76
Escherichia fergusonii Becca 0.18 EFB2_00835 putative FAD-linked oxidoreductase 0.70 EFB2_01456 Cysteine synthase B low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.18 OHPLBJKB_00727 putative FAD-linked oxidoreductase 0.69 OHPLBJKB_01302 Cysteine synthase B low > 74
Escherichia coli ECRC101 0.12 MCAODC_10845 ygcU Uncharacterized FAD-linked oxidoreductase YgcU 0.69 MCAODC_12700 cysM cysteine synthase B low > 87
Escherichia coli ECRC99 0.12 KEDOAH_07810 ygcU Uncharacterized FAD-linked oxidoreductase YgcU 0.69 KEDOAH_06050 cysM cysteine synthase B — —
Escherichia coli ECRC100 0.12 OKFHMN_20320 ygcU Uncharacterized FAD-linked oxidoreductase YgcU 0.69 OKFHMN_22170 cysM cysteine synthase B 0.70 4
Escherichia coli ECRC102 0.12 NIAGMN_18090 ygcU Uncharacterized FAD-linked oxidoreductase YgcU 0.69 NIAGMN_19940 cysM cysteine synthase B low > 80
Escherichia coli ECRC98 0.12 JDDGAC_23985 ygcU Uncharacterized FAD-linked oxidoreductase YgcU 0.69 JDDGAC_26120 cysM cysteine synthase B low > 87

Not shown: 28 genomes with orthologs for PS417_27035 only; 23 genomes with orthologs for PS417_20160 only