Conservation of cofitness between GFF3758 and GFF3759 in Sphingobium sp. HT1-2

66 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF3758 Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) 1.0 GFF3759 Ubiquinol-cytochrome C reductase, cytochrome B subunit (EC 1.10.2.2) 0.94 1
Sphingomonas koreensis DSMZ 15582 0.69 Ga0059261_3219 ubiquinol-cytochrome c reductase, iron-sulfur subunit 0.77 Ga0059261_3220 Cytochrome b subunit of the bc complex 0.80 1
Rhodospirillum rubrum S1H 0.55 Rru_A0364 ubiquinol-cytochrome c reductase, iron-sulfur subunit (NCBI) 0.59 Rru_A0363 Cytochrome b/b6-like (NCBI)
Azospirillum brasilense Sp245 0.53 AZOBR_RS20745 ubiquinol-cytochrome C reductase 0.59 AZOBR_RS20750 cytochrome B
Azospirillum sp. SherDot2 0.51 MPMX19_05012 Ubiquinol-cytochrome c reductase iron-sulfur subunit 0.60 MPMX19_05013 Cytochrome b
Sinorhizobium meliloti 1021 0.46 SMc00187 ubiquinol-cytochrome C reductase iron-sulfur subunit protein 0.63 SMc00188 cytochrome B transmembrane protein 0.73 1
Xanthobacter sp. DMC5 0.46 GFF61 Ubiquinol-cytochrome c reductase iron-sulfur subunit 0.58 GFF62 Cytochrome b/c1
Agrobacterium fabrum C58 0.46 Atu2239 ubiquinol-cytochrome C reductase iron-sulfur subunit 0.62 Atu2238 ubiquinol-cytochrome c reductase cytochrome b subunit 0.79 1
Rhizobium sp. OAE497 0.45 ABIE40_RS13130 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.62 ABIE40_RS13125 cytochrome b N-terminal domain-containing protein 0.89 4
Bosea sp. OAE506 0.44 ABIE41_RS11190 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.55 ABIE41_RS11195 cytochrome b/b6 0.75 1
Caulobacter crescentus NA1000 Δfur 0.43 CCNA_00505 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.58 CCNA_00506 cytochrome b low > 67
Caulobacter crescentus NA1000 0.43 CCNA_00505 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.58 CCNA_00506 cytochrome b 0.89 12
Brevundimonas sp. GW460-12-10-14-LB2 0.42 A4249_RS02560 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.56 A4249_RS02565 cytochrome b N-terminal domain-containing protein 0.68 1
Dinoroseobacter shibae DFL-12 0.40 Dshi_3278 ubiquinol-cytochrome c reductase, iron-sulfur subunit (RefSeq) 0.54 Dshi_3277 Cytochrome b/b6 domain (RefSeq)
Phaeobacter inhibens DSM 17395 0.39 PGA1_c34000 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.57 PGA1_c33990 cytochrome b
Alteromonas macleodii MIT1002 0.31 MIT1002_00814 Ubiquinol-cytochrome c reductase iron-sulfur subunit 0.40 MIT1002_00815 Cytochrome b/c1 0.80 10
Cupriavidus basilensis FW507-4G11 0.30 RR42_RS18825 ubiquinol-cytochrome C reductase 0.39 RR42_RS18820 cytochrome B 0.81 2
Rhodanobacter denitrificans FW104-10B01 0.30 LRK54_RS13765 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.40 LRK54_RS13770 cytochrome bc complex cytochrome b subunit
Rhodanobacter sp000427505 FW510-R12 0.29 LRK53_RS14835 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.37 LRK53_RS14830 cytochrome bc complex cytochrome b subunit
Rhodanobacter denitrificans MT42 0.29 LRK55_RS13480 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.40 LRK55_RS13485 cytochrome bc complex cytochrome b subunit
Vibrio cholerae E7946 ATCC 55056 0.29 CSW01_03045 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.40 CSW01_03050 cytochrome b 0.48 14
Rhodanobacter sp. FW510-T8 0.29 OKGIIK_03005 petA ubiquinol-cytochrome c reductase iron-sulfur subunit 0.37 OKGIIK_03010 qcrB,petB cytochrome b
Burkholderia phytofirmans PsJN 0.29 BPHYT_RS17630 ubiquinol-cytochrome C reductase 0.40 BPHYT_RS17625 cytochrome B 0.95 1
Paraburkholderia sabiae LMG 24235 0.29 QEN71_RS32270 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.39 QEN71_RS27780 cytochrome bc complex cytochrome b subunit
Kangiella aquimarina DSM 16071 0.28 B158DRAFT_1672 ubiquinol-cytochrome c reductase, iron-sulfur subunit 0.40 B158DRAFT_2101 Cytochrome b subunit of the bc complex low > 40
Paraburkholderia graminis OAS925 0.28 ABIE53_003685 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.39 ABIE53_003684 ubiquinol-cytochrome c reductase cytochrome b subunit 0.91 1
Dyella japonica UNC79MFTsu3.2 0.28 ABZR86_RS09880 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.38 ABZR86_RS01575 cytochrome bc complex cytochrome b subunit low > 74
Pseudomonas stutzeri RCH2 0.28 Psest_3279 ubiquinol-cytochrome c reductase, iron-sulfur subunit 0.39 Psest_3278 Cytochrome b subunit of the bc complex
Paraburkholderia bryophila 376MFSha3.1 0.28 H281DRAFT_05669 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.40 H281DRAFT_05670 ubiquinol-cytochrome c reductase cytochrome b subunit
Dechlorosoma suillum PS 0.28 Dsui_1812 ubiquinol-cytochrome c reductase, iron-sulfur subunit 0.42 Dsui_1813 cytochrome b subunit of the bc complex
Pseudomonas sp. S08-1 0.28 OH686_08390 ubiquinol-cytochrome c reductase, iron-sulfur subunit 0.41 OH686_08385 Ubiquinol-cytochrome C reductase, cytochrome B subunit
Pseudomonas sp. RS175 0.28 PFR28_03606 Ubiquinol-cytochrome c reductase iron-sulfur subunit 0.41 PFR28_03605 Cytochrome b
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_17065 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.42 AO356_17070 cytochrome B 0.72 1
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_5337 Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) 0.41 Pf6N2E2_5338 Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) 0.97 1
Shewanella sp. ANA-3 0.28 Shewana3_0601 ubiquinol-cytochrome c reductase, iron-sulfur subunit (RefSeq) 0.40 Shewana3_0602 cytochrome b/b6 domain-containing protein (RefSeq)
Shewanella amazonensis SB2B 0.28 Sama_3021 ubiquinol--cytochrome-c reductase (RefSeq) 0.39 Sama_3020 ubiquinol-cytochrome c reductase, cytochrome b (RefSeq) 0.97 1
Shewanella oneidensis MR-1 0.27 SO0608 petA ubiquinol-cytochrome c reductase, iron-sulfur subunit (NCBI ptt file) 0.39 SO0609 petB ubiquinol-cytochrome c reductase, cytochrome b (NCBI ptt file)
Marinobacter adhaerens HP15 0.27 HP15_545 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.42 HP15_546 ubiquinol-cytochrome c reductase, cytochrome b
Shewanella loihica PV-4 0.27 Shew_0570 ubiquinol-cytochrome c reductase, iron-sulfur subunit (RefSeq) 0.39 Shew_0571 cytochrome b/b6 domain-containing protein (RefSeq) 0.89 1
Pseudomonas segetis P6 0.27 ACVTMO_RS18970 petA ubiquinol-cytochrome c reductase iron-sulfur subunit 0.41 ACVTMO_RS18965 cytochrome b
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS04195 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.41 PFLU_RS04200 cytochrome bc complex cytochrome b subunit 0.84 1
Pseudomonas simiae WCS417 0.27 PS417_04155 ubiquinol-cytochrome C reductase 0.41 PS417_04160 cytochrome B
Pseudomonas fluorescens FW300-N1B4 0.27 Pf1N1B4_962 Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) 0.42 Pf1N1B4_961 Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) 0.95 1
Pseudomonas fluorescens SBW25 0.27 PFLU_RS04195 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.41 PFLU_RS04200 cytochrome bc complex cytochrome b subunit low > 109
Variovorax sp. SCN45 0.27 GFF6694 Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) 0.38 GFF6695 Ubiquinol-cytochrome C reductase, cytochrome B subunit (EC 1.10.2.2) 0.68 2
Pseudomonas sp. DMC3 0.27 GFF4437 Ubiquinol-cytochrome c reductase iron-sulfur subunit 0.40 GFF4436 Cytochrome b 0.83 30
Variovorax sp. OAS795 0.27 ABID97_RS22985 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.38 ABID97_RS22980 cytochrome bc complex cytochrome b subunit 0.94 1
Pseudomonas sp. SVBP6 0.27 COO64_RS11795 petA ubiquinol-cytochrome c reductase iron-sulfur subunit 0.41 COO64_RS11800 cytochrome bc complex cytochrome b subunit 0.80 1
Pseudomonas orientalis W4I3 0.27 QF045_RS07155 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.41 QF045_RS07160 cytochrome bc complex cytochrome b subunit low > 93
Castellaniella sp019104865 MT123 0.27 ABCV34_RS12635 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.39 ABCV34_RS12630 cytochrome bc complex cytochrome b subunit
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_15245 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.42 AO353_15250 cytochrome B
Pseudomonas lactucae CFBP13502 0.26 GEMAOFIL_01036 Ubiquinol-cytochrome c reductase iron-sulfur subunit 0.41 GEMAOFIL_01037 Cytochrome b
Lysobacter sp. OAE881 0.26 ABIE51_RS15440 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.42 ABIE51_RS15435 cytochrome bc complex cytochrome b subunit 0.96 1
Hydrogenophaga sp. GW460-11-11-14-LB1 0.26 GFF1295 Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) 0.40 GFF1294 Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2)
Pseudomonas putida KT2440 0.26 PP_1317 Ubiquinol-cytochrome c reductase iron-sulfur subunit 0.41 PP_1318 Cytochrome b 0.77 1
Pseudomonas sp. BP01 0.26 JOY50_RS15215 petA ubiquinol-cytochrome c reductase iron-sulfur subunit 0.41 JOY50_RS15210 cytochrome bc complex cytochrome b subunit 0.71 9
Methylophilus sp. DMC18 0.26 GFF1577 Ubiquinol-cytochrome c reductase iron-sulfur subunit 0.38 GFF1578 Cytochrome b/c1
Pseudomonas aeruginosa PUPa3 0.25 DQ20_RS56780 petA;go_component=respiratory ubiquinol-cytochrome c reductase iron-sulfur subunit 0.42 DQ20_RS56785 cytochrome bc complex cytochrome b subunit
Pseudomonas aeruginosa PA14 0.25 IKLFDK_01935 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.42 IKLFDK_01940 cytochrome b 0.96 1
Pseudomonas aeruginosa MRSN321 0.25 DY961_RS24320 petA;go_component=respiratory ubiquinol-cytochrome c reductase iron-sulfur subunit 0.42 DY961_RS24325 cytochrome bc complex cytochrome b subunit
Ralstonia solanacearum PSI07 0.25 RPSI07_RS10505 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.38 RPSI07_RS10510 cytochrome b
Ralstonia solanacearum UW163 0.25 UW163_RS06885 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.39 UW163_RS06890 cytochrome b
Ralstonia solanacearum IBSBF1503 0.25 RALBFv3_RS06730 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.39 RALBFv3_RS06725 cytochrome b
Ralstonia solanacearum GMI1000 0.25 RS_RS14675 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.38 RS_RS14670 cytochrome b 0.94 1
Herbaspirillum seropedicae SmR1 0.24 HSERO_RS20245 ubiquinol-cytochrome C reductase 0.39 HSERO_RS20240 cytochrome B
Xanthomonas campestris pv. campestris strain 8004 0.24 Xcc-8004.2228.1 Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) 0.41 Xcc-8004.2229.1 Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) 0.76 1
Ralstonia sp. UNC404CL21Col 0.24 ABZR87_RS02385 ubiquinol-cytochrome c reductase iron-sulfur subunit 0.38 ABZR87_RS02380 cytochrome bc complex cytochrome b subunit 0.90 2

Not shown: 4 genomes with orthologs for GFF3758 only; 2 genomes with orthologs for GFF3759 only