Conservation of cofitness between GFF79 and GFF3697 in Sphingobium sp. HT1-2

110 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF79 Amidophosphoribosyltransferase (EC 2.4.2.14) 1.0 GFF3697 Argininosuccinate synthase (EC 6.3.4.5) 0.74 40
Sphingomonas koreensis DSMZ 15582 0.81 Ga0059261_3626 amidophosphoribosyltransferase (EC 2.4.2.14) 0.87 Ga0059261_1393 argininosuccinate synthase (EC 6.3.4.5) — —
Azospirillum brasilense Sp245 0.63 AZOBR_RS08310 amidophosphoribosyltransferase 0.73 AZOBR_RS00785 argininosuccinate synthase — —
Azospirillum sp. SherDot2 0.63 MPMX19_00906 Amidophosphoribosyltransferase 0.72 MPMX19_02369 Argininosuccinate synthase — —
Magnetospirillum magneticum AMB-1 0.63 AMB_RS10545 amidophosphoribosyltransferase 0.75 AMB_RS05720 argininosuccinate synthase — —
Xanthobacter sp. DMC5 0.61 GFF1872 Amidophosphoribosyltransferase 0.79 GFF4322 Argininosuccinate synthase — —
Rhodospirillum rubrum S1H 0.61 Rru_A0404 Amidophosphoribosyl transferase (NCBI) 0.70 Rru_A3751 Argininosuccinate synthase (NCBI) low > 58
Bosea sp. OAE506 0.60 ABIE41_RS17810 amidophosphoribosyltransferase 0.77 ABIE41_RS00340 argininosuccinate synthase — —
Rhodopseudomonas palustris CGA009 0.59 TX73_015990 amidophosphoribosyltransferase 0.16 TX73_002040 argininosuccinate synthase — —
Caulobacter crescentus NA1000 0.57 CCNA_01730 amidophosphoribosyltransferase 0.77 CCNA_00128 argininosuccinate synthase — —
Caulobacter crescentus NA1000 Δfur 0.57 CCNA_01730 amidophosphoribosyltransferase 0.77 CCNA_00128 argininosuccinate synthase low > 67
Rhizobium sp. OAE497 0.56 ABIE40_RS06270 amidophosphoribosyltransferase 0.73 ABIE40_RS18150 argininosuccinate synthase — —
Agrobacterium fabrum C58 0.56 Atu1075 amidophosphoribosyltransferase 0.73 Atu2667 argininosuccinate synthase — —
Sinorhizobium meliloti 1021 0.56 SMc00554 amidophosphoribosyltransferase 0.73 SMc03826 argininosuccinate synthase 0.82 67
Phaeobacter inhibens DSM 17395 0.56 PGA1_c10810 amidophosphoribosyltransferase PurF 0.77 PGA1_c34920 argininosuccinate synthase ArgG — —
Dinoroseobacter shibae DFL-12 0.54 Dshi_2132 amidophosphoribosyltransferase (RefSeq) 0.78 Dshi_3472 Argininosuccinate synthase (RefSeq) 0.67 32
Brevundimonas sp. GW460-12-10-14-LB2 0.53 A4249_RS03735 amidophosphoribosyltransferase 0.75 A4249_RS14275 argininosuccinate synthase — —
Desulfovibrio vulgaris Miyazaki F 0.43 DvMF_2307 amidophosphoribosyltransferase (RefSeq) 0.60 DvMF_0047 argininosuccinate synthase (RefSeq) 0.77 24
Desulfovibrio vulgaris Hildenborough JW710 0.43 DVU0161 purF amidophosphoribosyltransferase (TIGR) 0.60 DVU1095 argG argininosuccinate synthase (TIGR) — —
Bifidobacterium breve UCC2003 0.43 BBR_RS13380 amidophosphoribosyltransferase 0.36 BBR_RS13915 argininosuccinate synthase low > 34
Synechocystis sp000284455 PCC 6803 0.41 SGL_RS13120 amidophosphoribosyltransferase 0.41 SGL_RS18195 argininosuccinate synthase — —
Synechococcus elongatus PCC 7942 0.39 Synpcc7942_0004 purF amidophosphoribosyltransferase 0.41 Synpcc7942_0009 argG argininosuccinate synthase — —
Mycobacterium tuberculosis H37Rv 0.38 Rv0808 Amidophosphoribosyltransferase PurF (glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (gpatase) 0.36 Rv1658 Probable argininosuccinate synthase ArgG — —
Methanococcus maripaludis JJ 0.36 MMJJ_RS08440 amidophosphoribosyltransferase 0.37 MMJJ_RS05060 argininosuccinate synthase — —
Methanococcus maripaludis S2 0.35 MMP_RS05915 amidophosphoribosyltransferase 0.40 MMP_RS00425 argininosuccinate synthase — —
Escherichia fergusonii Becca 0.31 EFB2_01546 Amidophosphoribosyltransferase 0.16 EFB2_00651 Argininosuccinate synthase low > 86
Escherichia coli ECOR38 0.31 HEPCGN_21910 purF amidophosphoribosyltransferase 0.16 HEPCGN_16965 argG argininosuccinate synthase 0.71 68
Escherichia coli ECRC101 0.31 MCAODC_13755 purF amidophosphoribosyltransferase 0.16 MCAODC_08610 argG argininosuccinate synthase 0.42 68
Escherichia coli Nissle 1917 0.31 ECOLIN_RS13405 amidophosphoribosyltransferase 0.16 ECOLIN_RS18275 argininosuccinate synthase — —
Escherichia coli ECRC98 0.31 JDDGAC_26675 purF amidophosphoribosyltransferase 0.16 JDDGAC_21715 argG argininosuccinate synthase low > 87
Escherichia coli ECRC100 0.31 OKFHMN_22715 purF amidophosphoribosyltransferase 0.16 OKFHMN_18090 argG argininosuccinate synthase low > 79
Escherichia coli ECRC102 0.31 NIAGMN_20485 purF amidophosphoribosyltransferase 0.16 NIAGMN_15850 argG argininosuccinate synthase low > 80
Klebsiella michiganensis M5al 0.31 BWI76_RS20350 amidophosphoribosyltransferase 0.16 BWI76_RS25115 argininosuccinate synthase 0.83 16
Escherichia coli ECRC99 0.31 KEDOAH_05480 purF amidophosphoribosyltransferase 0.16 KEDOAH_10060 argG argininosuccinate synthase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.31 OHPLBJKB_01393 Amidophosphoribosyltransferase 0.16 OHPLBJKB_00528 Argininosuccinate synthase low > 74
Escherichia coli ECOR27 0.31 NOLOHH_14335 purF amidophosphoribosyltransferase 0.16 NOLOHH_09890 argG argininosuccinate synthase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.31 GFF1927 Amidophosphoribosyltransferase (EC 2.4.2.14) 0.16 GFF2913 Argininosuccinate synthase (EC 6.3.4.5) low > 78
Escherichia coli BW25113 0.31 b2312 purF amidophosphoribosyltransferase (NCBI) 0.16 b3172 argG argininosuccinate synthase (NCBI) 0.80 30
Dickeya dadantii 3937 0.31 DDA3937_RS14435 amidophosphoribosyltransferase 0.17 DDA3937_RS20890 argininosuccinate synthase low > 74
Escherichia coli BL21 0.31 ECD_02237 amidophosphoribosyltransferase 0.16 ECD_03038 argininosuccinate synthetase low > 61
Escherichia coli ECRC62 0.31 BNILDI_13255 purF amidophosphoribosyltransferase 0.16 BNILDI_01645 argG argininosuccinate synthase low > 75
Enterobacter sp. TBS_079 0.31 MPMX20_03247 Amidophosphoribosyltransferase 0.16 MPMX20_04077 Argininosuccinate synthase 0.88 11
Dickeya dianthicola ME23 0.31 DZA65_RS15335 amidophosphoribosyltransferase 0.16 DZA65_RS00355 argininosuccinate synthase 0.77 13
Ralstonia solanacearum PSI07 0.31 RPSI07_RS14765 amidophosphoribosyltransferase 0.15 RPSI07_RS12120 argininosuccinate synthase — —
Dickeya dianthicola 67-19 0.31 HGI48_RS14405 amidophosphoribosyltransferase 0.16 HGI48_RS00355 argininosuccinate synthase 0.65 37
Pantoea agglomerans CFBP13505 P0401 0.31 PagCFBP13505_RS00230 amidophosphoribosyltransferase 0.47 PagCFBP13505_RS18425 argininosuccinate synthase low > 74
Enterobacter asburiae PDN3 0.31 EX28DRAFT_0292 amidophosphoribosyltransferase (EC 2.4.2.14) 0.16 EX28DRAFT_3224 argininosuccinate synthase (EC 6.3.4.5) low > 76
Pantoea sp. MT58 0.31 IAI47_06275 amidophosphoribosyltransferase 0.47 IAI47_00915 argininosuccinate synthase 0.77 45
Shewanella loihica PV-4 0.30 Shew_2302 amidophosphoribosyltransferase (RefSeq) 0.47 Shew_0205 argininosuccinate synthase (RefSeq) 0.79 48
Shewanella oneidensis MR-1 0.30 SO3064 purF amidophosphoribosyltransferase (NCBI ptt file) 0.47 SO0278 argG argininosuccinate synthase (NCBI ptt file) 0.82 57
Shewanella sp. ANA-3 0.30 Shewana3_1483 amidophosphoribosyltransferase (RefSeq) 0.47 Shewana3_3902 argininosuccinate synthase (RefSeq) 0.83 57
Serratia liquefaciens MT49 0.30 IAI46_17810 amidophosphoribosyltransferase 0.48 IAI46_24505 argininosuccinate synthase low > 86
Klebsiella pneumoniae MKP103 0.30 KDGMDA_27185 amidophosphoribosyltransferase 0.15 KDGMDA_05920 argininosuccinate synthase low > 95
Erwinia tracheiphila HP pepo 2.2 0.30 IJEDHG_17915 purF amidophosphoribosyltransferase 0.47 IJEDHG_13055 argG argininosuccinate synthase low > 61
Ralstonia solanacearum UW163 0.30 UW163_RS11175 amidophosphoribosyltransferase 0.15 UW163_RS08445 argininosuccinate synthase — —
Erwinia tracheiphila SCR3 0.30 LU632_RS07865 purF amidophosphoribosyltransferase 0.47 LU632_RS19605 argininosuccinate synthase 0.68 56
Ralstonia solanacearum IBSBF1503 0.30 RALBFv3_RS02550 amidophosphoribosyltransferase 0.15 RALBFv3_RS05180 argininosuccinate synthase — —
Erwinia amylovora T8 0.30 OLJFJH_11280 amidophosphoribosyltransferase 0.47 OLJFJH_06125 argininosuccinate synthase 0.81 20
Rahnella sp. WP5 0.30 EX31_RS19570 amidophosphoribosyltransferase 0.16 EX31_RS13445 argininosuccinate synthase 0.93 17
Ralstonia solanacearum GMI1000 0.30 RS_RS09930 amidophosphoribosyltransferase 0.15 RS_RS12800 argininosuccinate synthase — —
Pectobacterium carotovorum WPP14 0.30 HER17_RS07020 amidophosphoribosyltransferase 0.16 HER17_RS21055 argininosuccinate synthase 0.82 74
Acidovorax sp. GW101-3H11 0.30 Ac3H11_2608 Amidophosphoribosyltransferase (EC 2.4.2.14) 0.16 Ac3H11_2616 Argininosuccinate synthase (EC 6.3.4.5) — —
Paraburkholderia graminis OAS925 0.30 ABIE53_004816 amidophosphoribosyltransferase 0.66 ABIE53_003355 argininosuccinate synthase — —
Methylophilus sp. DMC18 0.30 GFF661 Amidophosphoribosyltransferase 0.65 GFF643 Argininosuccinate synthase — —
Alteromonas macleodii MIT1002 0.30 MIT1002_02524 Amidophosphoribosyltransferase 0.47 MIT1002_00468 Argininosuccinate synthase 0.94 36
Shewanella amazonensis SB2B 0.30 Sama_2146 amidophosphoribosyltransferase (RefSeq) 0.47 Sama_0259 argininosuccinate synthase (RefSeq) 0.78 41
Dechlorosoma suillum PS 0.29 Dsui_3186 amidophosphoribosyltransferase 0.68 Dsui_3248 argininosuccinate synthase — —
Cupriavidus basilensis FW507-4G11 0.29 RR42_RS14325 amidophosphoribosyltransferase 0.67 RR42_RS17170 argininosuccinate synthase — —
Paraburkholderia bryophila 376MFSha3.1 0.29 H281DRAFT_06060 amidophosphoribosyltransferase 0.66 H281DRAFT_04120 argininosuccinate synthase 0.58 10
Vibrio cholerae E7946 ATCC 55056 0.29 CSW01_05115 amidophosphoribosyltransferase 0.47 CSW01_13370 argininosuccinate synthase 0.35 41
Burkholderia phytofirmans PsJN 0.29 BPHYT_RS33840 amidophosphoribosyltransferase 0.66 BPHYT_RS15920 argininosuccinate synthase 0.86 9
Ralstonia sp. UNC404CL21Col 0.29 ABZR87_RS14465 amidophosphoribosyltransferase 0.15 ABZR87_RS00835 argininosuccinate synthase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.29 GFF300 Amidophosphoribosyltransferase (EC 2.4.2.14) 0.15 GFF294 Argininosuccinate synthase (EC 6.3.4.5) — —
Paraburkholderia sabiae LMG 24235 0.29 QEN71_RS17680 amidophosphoribosyltransferase 0.17 QEN71_RS09235 argininosuccinate synthase 0.80 34
Marinobacter adhaerens HP15 0.29 HP15_1821 amidophosphoribosyltransferase 0.66 HP15_2367 argininosuccinate synthase — —
Variovorax sp. OAS795 0.29 ABID97_RS21635 amidophosphoribosyltransferase 0.15 ABID97_RS21670 argininosuccinate synthase — —
Herbaspirillum seropedicae SmR1 0.29 HSERO_RS16445 amidophosphoribosyltransferase 0.16 HSERO_RS07180 argininosuccinate synthase — —
Kangiella aquimarina DSM 16071 0.28 B158DRAFT_1488 amidophosphoribosyltransferase (EC 2.4.2.14) 0.22 B158DRAFT_1976 argininosuccinate synthase (EC 6.3.4.5) — —
Variovorax sp. SCN45 0.28 GFF3089 Amidophosphoribosyltransferase (EC 2.4.2.14) 0.15 GFF3096 Argininosuccinate synthase (EC 6.3.4.5) — —
Xanthomonas campestris pv. campestris strain 8004 0.28 Xcc-8004.4073.1 Amidophosphoribosyltransferase (EC 2.4.2.14) 0.18 Xcc-8004.2318.1 Argininosuccinate synthase (EC 6.3.4.5) 0.78 14
Dyella japonica UNC79MFTsu3.2 0.28 ABZR86_RS06775 amidophosphoribosyltransferase 0.19 ABZR86_RS08715 arginosuccinate synthetase (EC 6.3.4.5) (from data) 0.96 15
Pseudomonas sp. DMC3 0.27 GFF798 Amidophosphoribosyltransferase 0.68 GFF5092 Argininosuccinate synthase low > 89
Pseudomonas fluorescens FW300-N2E2 0.27 Pf6N2E2_76 Amidophosphoribosyltransferase (EC 2.4.2.14) 0.68 Pf6N2E2_5590 Argininosuccinate synthase (EC 6.3.4.5) — —
Pseudomonas fluorescens SBW25 0.27 PFLU_RS20515 amidophosphoribosyltransferase 0.68 PFLU_RS05725 argininosuccinate synthase — —
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_05570 purF amidophosphoribosyltransferase 0.18 OKGIIK_09465 argG argininosuccinate synthase low > 53
Pseudomonas segetis P6 0.27 MPMX49_03061 Amidophosphoribosyltransferase 0.68 MPMX49_01447 Argininosuccinate synthase — —
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS20515 amidophosphoribosyltransferase 0.68 PFLU_RS05725 argininosuccinate synthase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.27 Psyr_1668 amidophosphoribosyltransferase 0.67 Psyr_3892 argininosuccinate synthase — —
Pseudomonas syringae pv. syringae B728a 0.27 Psyr_1668 amidophosphoribosyltransferase 0.67 Psyr_3892 argininosuccinate synthase — —
Pseudomonas lactucae CFBP13502 0.27 GEMAOFIL_03935 Amidophosphoribosyltransferase 0.68 GEMAOFIL_01315 Argininosuccinate synthase — —
Rhodanobacter denitrificans FW104-10B01 0.27 LRK54_RS01340 amidophosphoribosyltransferase 0.18 LRK54_RS02400 argininosuccinate synthase 0.74 5
Pseudomonas fluorescens FW300-N2E3 0.27 AO353_20690 amidophosphoribosyltransferase 0.68 AO353_04105 argininosuccinate synthase — —
Rhodanobacter denitrificans MT42 0.27 LRK55_RS01105 amidophosphoribosyltransferase 0.18 LRK55_RS02155 argininosuccinate synthase low > 63
Pseudomonas simiae WCS417 0.27 PS417_18535 amidophosphoribosyltransferase 0.68 PS417_05640 argininosuccinate synthase — —
Pseudomonas sp. SVBP6 0.27 COO64_RS05600 purF amidophosphoribosyltransferase 0.67 COO64_RS16870 argininosuccinate synthase low > 93
Pseudomonas sp. S08-1 0.27 OH686_04420 amidophosphoribosyltransferase 0.67 OH686_03930 argininosuccinate synthase — —
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_3935 Amidophosphoribosyltransferase (EC 2.4.2.14) 0.68 PfGW456L13_1749 Argininosuccinate synthase (EC 6.3.4.5) — —
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_21465 amidophosphoribosyltransferase 0.68 AO356_18325 argininosuccinate synthase 0.84 3
Pseudomonas sp. RS175 0.27 PFR28_02811 Amidophosphoribosyltransferase 0.68 PFR28_03353 Argininosuccinate synthase — —
Pseudomonas putida KT2440 0.27 PP_2000 amidophosphoribosyl transferase 0.67 PP_1088 Argininosuccinate synthase 0.32 30
Rhodanobacter sp000427505 FW510-R12 0.27 LRK53_RS08695 amidophosphoribosyltransferase 0.18 LRK53_RS07545 argininosuccinate synthase 0.88 5
Pseudomonas sp. BP01 0.27 JOY50_RS16565 purF amidophosphoribosyltransferase 0.66 JOY50_RS28480 argininosuccinate synthase — —
Acinetobacter baumannii LAC-4 0.27 RR41_RS06350 amidophosphoribosyltransferase 0.15 RR41_RS09365 argininosuccinate synthase — —
Pseudomonas aeruginosa PA14 0.27 IKLFDK_15815 amidophosphoribosyltransferase 0.67 IKLFDK_17995 argininosuccinate synthase low > 100
Castellaniella sp019104865 MT123 0.27 ABCV34_RS04130 amidophosphoribosyltransferase 0.15 ABCV34_RS05390 argininosuccinate synthase — —
Lysobacter sp. OAE881 0.26 ABIE51_RS06180 amidophosphoribosyltransferase 0.17 ABIE51_RS13405 argininosuccinate synthase low > 62
Pseudomonas stutzeri RCH2 0.26 Psest_2579 amidophosphoribosyltransferase 0.67 Psest_3121 argininosuccinate synthase — —
Acinetobacter radioresistens SK82 0.26 MPMX26_01122 Amidophosphoribosyltransferase 0.15 MPMX26_02260 Argininosuccinate synthase low > 36
Phocaeicola vulgatus CL09T03C04 0.16 HMPREF1058_RS04675 amidophosphoribosyltransferase 0.18 HMPREF1058_RS08845 argininosuccinate synthase low > 67
Parabacteroides merdae CL09T00C40 0.16 HMPREF1078_RS10430 amidophosphoribosyltransferase 0.18 HMPREF1078_RS10575 argininosuccinate synthase low > 61
Phocaeicola dorei CL03T12C01 0.16 ABI39_RS18960 amidophosphoribosyltransferase 0.18 ABI39_RS02975 argininosuccinate synthase low > 72

Not shown: 1 genomes with orthologs for GFF79 only; 9 genomes with orthologs for GFF3697 only