Conservation of cofitness between GFF312 and GFF3208 in Sphingobium sp. HT1-2

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF312 Vitamin B12 ABC transporter, permease protein BtuC 1.0 GFF3208 8-amino-7-oxononanoate synthase (EC 2.3.1.47) 0.73 1
Sphingomonas koreensis DSMZ 15582 0.72 Ga0059261_0623 ABC-type Fe3+-siderophore transport system, permease component 0.56 Ga0059261_3672 7-keto-8-aminopelargonate synthetase and related enzymes low > 68
Rhodopseudomonas palustris CGA009 0.44 TX73_003740 iron ABC transporter permease 0.50 TX73_015415 8-amino-7-oxononanoate synthase low > 86
Caulobacter crescentus NA1000 Δfur 0.37 CCNA_01250 FecCD-family transporter protein 0.23 CCNA_01647 8-amino-7-oxononanoate synthase low > 67
Caulobacter crescentus NA1000 0.37 CCNA_01250 FecCD-family transporter protein 0.23 CCNA_01647 8-amino-7-oxononanoate synthase low > 66
Fusobacterium nucleatum SB010 0.29 HUW76_10040 iron ABC transporter permease 0.22 HUW76_05725 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme low > 35
Vibrio cholerae E7946 ATCC 55056 0.26 CSW01_18715 iron ABC transporter permease 0.25 CSW01_05650 8-amino-7-oxononanoate synthase low > 62
Rhizobium sp. OAE497 0.26 ABIE40_RS14430 iron ABC transporter permease 0.45 ABIE40_RS21070 8-amino-7-oxononanoate synthase low > 107
Desulfovibrio vulgaris Hildenborough JW710 0.25 DVU0649 iron compound ABC transporter, permease protein (TIGR) 0.17 DVU2564 bioF 8-amino-7-oxononanoate synthase (Dmitry Rodionov) low > 55
Klebsiella pneumoniae MKP103 0.25 KDGMDA_24225 ABC transporter permease 0.25 KDGMDA_17030 8-amino-7-oxononanoate synthase low > 95
Agrobacterium fabrum C58 0.25 Atu5314 ABC transporter membrane spanning protein (iron) 0.51 Atu3998 8-amino-7-oxononanoate synthase — —
Escherichia coli ECRC102 0.24 NIAGMN_27865 fepD iron ABC transporter permease 0.24 NIAGMN_04440 bioF 8-amino-7-oxononanoate synthase low > 80
Escherichia coli ECRC100 0.24 OKFHMN_28370 fepD iron ABC transporter permease 0.24 OKFHMN_06395 bioF 8-amino-7-oxononanoate synthase — —
Escherichia coli ECRC99 0.24 KEDOAH_25360 fepD iron ABC transporter permease 0.24 KEDOAH_21515 bioF 8-amino-7-oxononanoate synthase — —
Escherichia coli ECRC101 0.24 MCAODC_06840 chuU heme permease protein ChuU 0.24 MCAODC_25610 bioF 8-amino-7-oxononanoate synthase low > 87
Escherichia fergusonii Becca 0.24 EFB2_00303 Hemin transport system permease protein HmuU 0.25 EFB2_03329 8-amino-7-oxononanoate synthase low > 86
Escherichia coli ECRC98 0.24 JDDGAC_19955 chuU heme permease protein ChuU 0.24 JDDGAC_10030 bioF 8-amino-7-oxononanoate synthase low > 87
Escherichia coli ECOR38 0.24 HEPCGN_24840 fepD iron ABC transporter permease 0.24 HEPCGN_01645 bioF 8-amino-7-oxononanoate synthase low > 88
Escherichia coli Nissle 1917 0.24 ECOLIN_RS20060 heme ABC transporter permease ShuU/ChuU 0.25 ECOLIN_RS04135 8-amino-7-oxononanoate synthase — —
Rahnella sp. WP5 0.23 EX31_RS14035 vitamin B12 ABC transporter permease BtuC 0.22 EX31_RS23700 8-amino-7-oxononanoate synthase low > 89
Ralstonia solanacearum PSI07 0.23 RPSI07_RS12880 iron ABC transporter permease 0.23 RPSI07_RS16700 8-amino-7-oxononanoate synthase low > 81
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.23 GFF3529 Vitamin B12 ABC transporter, permease component BtuC 0.25 GFF672 8-amino-7-oxononanoate synthase (EC 2.3.1.47) low > 78
Escherichia coli BL21 0.22 ECD_04154 ferric citrate ABC transporter permease 0.25 ECD_00743 8-amino-7-oxononanoate synthase low > 61
Escherichia coli BW25113 0.22 b4288 fecD KpLE2 phage-like element; iron-dicitrate transporter subunit (NCBI) 0.24 b0776 bioF 8-amino-7-oxononanoate synthase (NCBI) low > 76
Pontibacter actiniarum KMM 6156, DSM 19842 0.22 CA264_01390 iron ABC transporter permease 0.30 CA264_02420 8-amino-7-oxononanoate synthase low > 74
Shewanella amazonensis SB2B 0.22 Sama_0761 iron-compound ABC transporter, permease protein (RefSeq) 0.24 Sama_1439 8-amino-7-oxononanoate synthase (RefSeq) — —
Erwinia tracheiphila SCR3 0.22 LU632_RS20345 iron ABC transporter permease 0.23 LU632_RS09135 bioF 8-amino-7-oxononanoate synthase — —
Erwinia tracheiphila HP pepo 2.2 0.22 IJEDHG_14790 iron ABC transporter 0.23 IJEDHG_19570 bioF 8-amino-7-oxononanoate synthase — —
Cellulophaga baltica 18 0.21 M666_RS18080 iron ABC transporter permease 0.25 M666_RS03385 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme — —
Bacteroides ovatus ATCC 8483 0.21 BACOVA_03269 iron chelate uptake ABC transporter, FeCT family, permease protein 0.27 BACOVA_00871 putative 8-amino-7-oxononanoate synthase low > 96
Methanococcus maripaludis S2 0.21 MMP_RS06090 iron ABC transporter permease 0.27 MMP_RS08100 8-amino-7-oxononanoate synthase low > 25
Ralstonia sp. UNC404CL21Col 0.21 ABZR87_RS00090 iron ABC transporter permease 0.23 ABZR87_RS12340 8-amino-7-oxononanoate synthase low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.21 OHPLBJKB_02022 Vitamin B12 import system permease protein BtuC 0.25 OHPLBJKB_02937 8-amino-7-oxononanoate synthase low > 74
Escherichia coli ECOR27 0.21 NOLOHH_17620 btuC vitamin B12 ABC transporter permease BtuC 0.25 NOLOHH_22765 bioF 8-amino-7-oxononanoate synthase low > 76
Paraburkholderia sabiae LMG 24235 0.21 QEN71_RS25140 iron ABC transporter permease 0.26 QEN71_RS01095 8-amino-7-oxononanoate synthase — —
Methanococcus maripaludis JJ 0.21 MMJJ_RS08265 iron ABC transporter permease 0.27 MMJJ_RS06265 8-amino-7-oxononanoate synthase low > 28
Ralstonia solanacearum GMI1000 0.21 RS_RS12045 iron ABC transporter permease 0.23 RS_RS07435 8-amino-7-oxononanoate synthase low > 80
Pantoea sp. MT58 0.21 IAI47_10945 vitamin B12 ABC transporter permease BtuC 0.21 IAI47_13525 8-amino-7-oxononanoate synthase low > 76
Burkholderia phytofirmans PsJN 0.21 BPHYT_RS04855 iron ABC transporter 0.27 BPHYT_RS02160 8-amino-7-oxononanoate synthase low > 109
Ralstonia solanacearum IBSBF1503 0.20 RALBFv3_RS04490 iron ABC transporter permease 0.22 RALBFv3_RS00820 8-amino-7-oxononanoate synthase low > 76
Dechlorosoma suillum PS 0.20 Dsui_0530 ABC-type Fe3+-siderophore transport system, permease component 0.29 Dsui_2881 8-amino-7-oxononanoate synthase low > 51
Shewanella loihica PV-4 0.20 Shew_0713 transport system permease protein (RefSeq) 0.28 Shew_1720 8-amino-7-oxononanoate synthase (RefSeq) — —
Ralstonia solanacearum UW163 0.20 UW163_RS09180 iron ABC transporter permease 0.22 UW163_RS14155 8-amino-7-oxononanoate synthase — —
Erwinia amylovora T8 0.20 OLJFJH_14640 iron ABC transporter 0.26 OLJFJH_16755 8-amino-7-oxononanoate synthase low > 58
Paraburkholderia bryophila 376MFSha3.1 0.19 H281DRAFT_00137 iron complex transport system permease protein 0.27 H281DRAFT_02095 8-amino-7-oxononanoate synthase low > 103
Paraburkholderia graminis OAS925 0.19 ABIE53_001247 iron complex transport system permease protein 0.27 ABIE53_000579 8-amino-7-oxononanoate synthase low > 113
Acinetobacter baumannii LAC-4 0.19 RR41_RS13355 iron ABC transporter permease 0.29 RR41_RS15230 8-amino-7-oxononanoate synthase — —
Parabacteroides merdae CL09T00C40 0.19 HMPREF1078_RS07465 iron ABC transporter permease 0.25 HMPREF1078_RS15290 8-amino-7-oxononanoate synthase low > 61
Escherichia coli ECRC62 0.18 BNILDI_21975 fepD ferrienterobactin ABC transporter permease 0.25 BNILDI_21035 bioF 8-amino-7-oxononanoate synthase low > 75
Phocaeicola vulgatus CL09T03C04 0.17 HMPREF1058_RS01565 iron ABC transporter permease 0.25 HMPREF1058_RS17960 8-amino-7-oxononanoate synthase low > 67
Phocaeicola dorei CL03T12C01 0.17 ABI39_RS15500 iron ABC transporter permease 0.25 ABI39_RS14250 8-amino-7-oxononanoate synthase low > 72
Variovorax sp. SCN45 0.17 GFF446 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) 0.23 GFF144 8-amino-7-oxononanoate synthase (EC 2.3.1.47) low > 127
Variovorax sp. OAS795 0.15 ABID97_RS17405 iron ABC transporter permease 0.25 ABID97_RS16260 8-amino-7-oxononanoate synthase — —
Acinetobacter radioresistens SK82 0.09 MPMX26_01195 Petrobactin import system permease protein YclN 0.28 MPMX26_02453 8-amino-7-oxononanoate synthase 2 — —

Not shown: 52 genomes with orthologs for GFF312 only; 7 genomes with orthologs for GFF3208 only