Conservation of cofitness between GFF3485 and GFF3009 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF3485 Selenide,water dikinase (EC 2.7.9.3) 1.0 GFF3009 Xaa-Pro aminopeptidase (EC 3.4.11.9) 0.55 19
Escherichia fergusonii Becca 0.95 EFB2_02230 Selenide, water dikinase 0.94 EFB2_00994 Xaa-Pro aminopeptidase low > 86
Escherichia coli BW25113 0.94 b1764 selD selenophosphate synthetase (NCBI) 0.93 b2908 pepP proline aminopeptidase P II (NCBI) 0.30 34
Escherichia coli ECRC98 0.94 JDDGAC_01400 selD selenide, water dikinase SelD 0.94 JDDGAC_23145 pepP Xaa-Pro aminopeptidase 0.46 60
Escherichia coli ECRC100 0.94 OKFHMN_26825 selD selenide, water dikinase SelD 0.94 OKFHMN_19505 pepP Xaa-Pro aminopeptidase low > 79
Escherichia coli ECRC102 0.94 NIAGMN_01240 selD selenide, water dikinase SelD 0.94 NIAGMN_17270 pepP Xaa-Pro aminopeptidase low > 80
Escherichia coli Nissle 1917 0.94 ECOLIN_RS09835 selenide, water dikinase SelD 0.94 ECOLIN_RS16190 Xaa-Pro aminopeptidase — —
Escherichia coli ECOR38 0.94 HEPCGN_05195 selD selenide, water dikinase SelD 0.94 HEPCGN_18795 pepP Xaa-Pro aminopeptidase low > 88
Escherichia coli ECRC101 0.94 MCAODC_18585 selD selenide, water dikinase SelD 0.94 MCAODC_10025 pepP Xaa-Pro aminopeptidase 0.55 14
Escherichia coli ECRC99 0.94 KEDOAH_01285 selD selenide, water dikinase SelD 0.94 KEDOAH_08635 pepP Xaa-Pro aminopeptidase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.94 OHPLBJKB_01968 Selenide, water dikinase 0.94 OHPLBJKB_00807 Xaa-Pro aminopeptidase low > 74
Escherichia coli BL21 0.94 ECD_01733 selenophosphate synthase 0.94 ECD_02740 proline aminopeptidase P II low > 61
Escherichia coli ECOR27 0.93 NOLOHH_17335 selD selenide, water dikinase SelD 0.94 NOLOHH_11415 pepP Xaa-Pro aminopeptidase low > 76
Escherichia coli ECRC62 0.93 BNILDI_16120 selD selenide, water dikinase SelD 0.94 BNILDI_09950 pepP Xaa-Pro aminopeptidase low > 75
Enterobacter sp. TBS_079 0.93 MPMX20_01852 Selenide, water dikinase 0.92 MPMX20_03767 Xaa-Pro aminopeptidase low > 85
Enterobacter asburiae PDN3 0.92 EX28DRAFT_1765 selenophosphate synthase (EC 2.7.9.3) 0.91 EX28DRAFT_2960 Xaa-Pro aminopeptidase low > 76
Klebsiella pneumoniae MKP103 0.88 KDGMDA_19280 selenide water dikinase SelD 0.88 KDGMDA_04395 Xaa-Pro aminopeptidase low > 95
Klebsiella michiganensis M5al 0.86 BWI76_RS11600 selenide, water dikinase SelD 0.89 BWI76_RS23895 Xaa-Pro aminopeptidase low > 92
Serratia liquefaciens MT49 0.78 IAI46_14315 selenide, water dikinase SelD 0.82 IAI46_20875 Xaa-Pro aminopeptidase low > 87
Pseudomonas putida KT2440 0.64 PP_0823 Selenide, water dikinase 0.44 PP_5200 proline aminopeptidase P II low > 96
Pseudomonas sp. BP01 0.64 JOY50_RS22915 selD selenide, water dikinase SelD 0.43 JOY50_RS22445 pepP Xaa-Pro aminopeptidase low > 84
Pseudomonas sp. SVBP6 0.64 COO64_RS03760 selD selenide, water dikinase SelD 0.44 COO64_RS00990 pepP Xaa-Pro aminopeptidase low > 93
Pseudomonas stutzeri RCH2 0.63 Psest_2462 selenium donor protein 0.47 Psest_0175 Xaa-Pro aminopeptidase low > 67
Pseudomonas fluorescens FW300-N2E3 0.63 AO353_00050 selenide, water dikinase 0.45 AO353_08760 Xaa-Pro aminopeptidase low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.63 Psyr_0696 selenophosphate synthase 0.45 Psyr_0321 aminopeptidase P, Metallo peptidase, MEROPS family M24B low > 86
Pseudomonas syringae pv. syringae B728a 0.63 Psyr_0696 selenophosphate synthase 0.45 Psyr_0321 aminopeptidase P, Metallo peptidase, MEROPS family M24B low > 86
Pseudomonas sp. S08-1 0.63 OH686_21210 selenide, water dikinase 0.47 OH686_11205 Xaa-Pro aminopeptidase low > 80
Pseudomonas lactucae CFBP13502 0.63 GEMAOFIL_02182 Selenide, water dikinase 0.45 GEMAOFIL_05595 Xaa-Pro aminopeptidase low > 96
Pseudomonas fluorescens FW300-N2E2 0.63 Pf6N2E2_2151 Selenide,water dikinase (EC 2.7.9.3) 0.45 Pf6N2E2_4480 Xaa-Pro aminopeptidase (EC 3.4.11.9) low > 103
Herbaspirillum seropedicae SmR1 0.63 HSERO_RS15820 selenide, water dikinase 0.42 HSERO_RS03510 proline aminopeptidase P II low > 78
Pseudomonas orientalis W4I3 0.62 QF045_RS12440 selenide, water dikinase SelD 0.44 QF045_RS01655 Xaa-Pro aminopeptidase low > 93
Pseudomonas fluorescens FW300-N2C3 0.62 AO356_01395 selenide, water dikinase 0.45 AO356_13010 Xaa-Pro aminopeptidase low > 104
Pontibacter actiniarum KMM 6156, DSM 19842 0.62 CA264_15285 selenide, water dikinase SelD 0.31 CA264_20445 peptidase M24 family protein low > 74
Pseudomonas sp. RS175 0.62 PFR28_01285 Selenide, water dikinase 0.45 PFR28_04321 Xaa-Pro aminopeptidase low > 88
Pseudomonas simiae WCS417 0.62 PS417_10460 selenide, water dikinase 0.45 PS417_27285 Xaa-Pro aminopeptidase low > 88
Acidovorax sp. GW101-3H11 0.62 Ac3H11_1765 Selenide,water dikinase (EC 2.7.9.3) 0.38 Ac3H11_652 Xaa-Pro aminopeptidase (EC 3.4.11.9) low > 79
Pseudomonas aeruginosa PUPa3 0.62 DQ20_RS53965 selD;go_function=selenide%2C selenide water dikinase SelD 0.47 DQ20_RS50125 pepP;go_function=metalloaminopeptidase Xaa-Pro aminopeptidase low > 101
Pseudomonas aeruginosa MRSN321 0.62 DY961_RS19860 selD;go_function=selenide%2C selenide water dikinase SelD 0.47 DY961_RS11990 pepP;go_function=metalloaminopeptidase Xaa-Pro aminopeptidase low > 100
Pseudomonas aeruginosa PA14 0.62 IKLFDK_07875 selenide water dikinase SelD 0.47 IKLFDK_27350 Xaa-Pro aminopeptidase low > 98
Pseudomonas fluorescens FW300-N1B4 0.62 Pf1N1B4_97 Selenide,water dikinase (EC 2.7.9.3) 0.45 Pf1N1B4_2229 Xaa-Pro aminopeptidase (EC 3.4.11.9) low > 87
Pseudomonas fluorescens GW456-L13 0.62 PfGW456L13_2462 Selenide,water dikinase (EC 2.7.9.3) 0.44 PfGW456L13_896 Xaa-Pro aminopeptidase (EC 3.4.11.9) low > 87
Pseudomonas segetis P6 0.61 ACVTMO_RS13265 selD selenide, water dikinase SelD 0.46 ACVTMO_RS22265 pepP Xaa-Pro aminopeptidase low > 75
Pseudomonas sp. DMC3 0.61 GFF1384 Selenide, water dikinase 0.45 GFF316 Xaa-Pro aminopeptidase low > 89
Shewanella loihica PV-4 0.60 Shew_0135 selenide, water dikinase (RefSeq) 0.32 Shew_2358 peptidase M24 (RefSeq) low > 60
Shewanella amazonensis SB2B 0.60 Sama_0190 selenide, water dikinase (RefSeq) 0.36 Sama_1534 xaa-pro aminopeptidase (RefSeq) low > 62
Cupriavidus basilensis FW507-4G11 0.59 RR42_RS01805 selenophosphate synthase 0.43 RR42_RS02745 Xaa-Pro aminopeptidase low > 128
Paraburkholderia sabiae LMG 24235 0.48 QEN71_RS20070 selenide, water dikinase SelD 0.40 QEN71_RS26760 aminopeptidase P N-terminal domain-containing protein low > 153
Paraburkholderia graminis OAS925 0.46 ABIE53_004985 selenide,water dikinase 0.42 ABIE53_003487 Xaa-Pro aminopeptidase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_06382 selenophosphate synthase 0.42 H281DRAFT_04247 aminopeptidase P Metallo peptidase. MEROPS family M24B low > 103
Burkholderia phytofirmans PsJN 0.46 BPHYT_RS32455 segregation protein A 0.43 BPHYT_RS16575 Xaa-Pro aminopeptidase low > 109
Dechlorosoma suillum PS 0.44 Dsui_2309 selenium donor protein 0.39 Dsui_1591 Xaa-Pro aminopeptidase low > 51
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF807 Selenide,water dikinase (EC 2.7.9.3) 0.37 GFF2485 Xaa-Pro aminopeptidase (EC 3.4.11.9) low > 90
Variovorax sp. SCN45 0.43 GFF5649 Selenide,water dikinase (EC 2.7.9.3) 0.36 GFF7179 Xaa-Pro aminopeptidase (EC 3.4.11.9) low > 127
Variovorax sp. OAS795 0.43 ABID97_RS08115 selenide, water dikinase SelD 0.37 ABID97_RS02460 aminopeptidase P N-terminal domain-containing protein low > 91
Dyella japonica UNC79MFTsu3.2 0.41 ABZR86_RS04545 selenide, water dikinase SelD 0.37 ABZR86_RS11970 aminopeptidase P N-terminal domain-containing protein low > 74
Desulfovibrio vulgaris Miyazaki F 0.29 DvMF_0107 selenide, water dikinase (RefSeq) 0.11 DvMF_1929 peptidase M24 (RefSeq) low > 51
Desulfovibrio vulgaris Hildenborough JW710 0.28 DVU1332 selD selenide, water dikinase, selenocysteine-containing (TIGR) 0.11 DVU0296 peptidase, M24 family (TIGR) low > 55

Not shown: 7 genomes with orthologs for GFF3485 only; 43 genomes with orthologs for GFF3009 only