Conservation of cofitness between GFF2570 and GFF1632 in Sphingobium sp. HT1-2

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF2570 Uncharacterized amino acid permease, GabP family 1.0 GFF1632 AmpG permease 0.77 8
Ralstonia sp. UNC404CL21Col 0.43 ABZR87_RS13545 amino acid permease 0.26 ABZR87_RS05635 muropeptide transporter low > 80
Ralstonia solanacearum PSI07 0.41 RPSI07_RS15760 amino acid permease 0.25 RPSI07_RS23200 MFS transporter low > 81
Ralstonia solanacearum UW163 0.41 UW163_RS15035 amino acid permease 0.26 UW163_RS03435 MFS transporter — —
Ralstonia solanacearum IBSBF1503 0.41 RALBFv3_RS01725 amino acid permease 0.26 RALBFv3_RS10145 MFS transporter low > 76
Ralstonia solanacearum GMI1000 0.40 RS_RS08000 amino acid permease 0.26 RS_RS00760 MFS transporter low > 80
Cupriavidus basilensis FW507-4G11 0.38 RR42_RS01585 amino acid permease 0.22 RR42_RS01185 muropeptide transporter low > 128
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS00500 amino acid permease 0.23 QEN71_RS00280 AmpG family muropeptide MFS transporter low > 153
Paraburkholderia bryophila 376MFSha3.1 0.37 H281DRAFT_02180 amino acid/polyamine/organocation transporter, APC superfamily 0.23 H281DRAFT_02216 MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG low > 103
Dyella japonica UNC79MFTsu3.2 0.36 ABZR86_RS06670 amino acid permease 0.19 ABZR86_RS15655 MFS transporter low > 74
Burkholderia phytofirmans PsJN 0.36 BPHYT_RS01785 amino acid permease 0.22 BPHYT_RS01585 major facilitator superfamily protein low > 109
Rhodanobacter sp. FW510-T8 0.35 OKGIIK_05010 potE amino acid permease 0.22 OKGIIK_15695 MFS transporter 0.44 13
Methylophilus sp. DMC18 0.30 GFF1640 putative amino acid permease YhdG 0.21 GFF2063 Anhydromuropeptide permease low > 43
Klebsiella michiganensis M5al 0.13 BWI76_RS08745 proline-specific permease 0.25 BWI76_RS06500 muropeptide transporter AmpG low > 92
Klebsiella pneumoniae MKP103 0.13 KDGMDA_17010 proline-specific permease ProY 0.24 KDGMDA_14585 muropeptide MFS transporter AmpG low > 95
Sinorhizobium meliloti 1021 0.12 SMc02616 permease transmembrane protein 0.09 SMa2337 RhtX rhizobactin transporter low > 103
Azospirillum sp. SherDot2 0.11 MPMX19_05701 Putrescine transporter PotE 0.25 MPMX19_04371 Anhydromuropeptide permease low > 112
Rhizobium sp. OAE497 0.10 ABIE40_RS22430 APC family permease 0.07 ABIE40_RS22775 MFS transporter low > 107
Castellaniella sp019104865 MT123 0.10 ABCV34_RS10320 amino acid permease 0.23 ABCV34_RS10915 muropeptide transporter low > 48
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.10 GFF4300 Proline-specific permease proY 0.23 GFF4348 AmpG permease low > 78
Enterobacter asburiae PDN3 0.10 EX28DRAFT_2572 Gamma-aminobutyrate permease and related permeases 0.25 EX28DRAFT_2538 AmpG-like permease low > 76
Xanthobacter sp. DMC5 0.10 GFF442 hypothetical protein 0.20 GFF133 Anhydromuropeptide permease — —
Enterobacter sp. TBS_079 0.10 MPMX20_00805 Aromatic amino acid transport protein AroP 0.24 MPMX20_01024 Anhydromuropeptide permease low > 85
Dickeya dianthicola 67-19 0.10 HGI48_RS09825 APC family permease 0.23 HGI48_RS05665 muropeptide MFS transporter AmpG low > 71
Escherichia coli BL21 0.10 ECD_01273 putrescine importer 0.24 ECD_00384 muropeptide transporter low > 61
Shewanella sp. ANA-3 0.10 Shewana3_3634 amino acid permease-associated region (RefSeq) 0.23 Shewana3_0783 major facilitator transporter (RefSeq) low > 73
Escherichia coli ECOR27 0.10 NOLOHH_20135 puuP putrescine/proton symporter PuuP 0.24 NOLOHH_01290 ampG muropeptide MFS transporter AmpG low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.10 OHPLBJKB_02386 Putrescine importer PuuP 0.24 OHPLBJKB_03240 Protein AmpG low > 74
Shewanella oneidensis MR-1 0.10 SO4081 amino acid permease (NCBI ptt file) 0.24 SO3814 ampG protein, putative (NCBI ptt file) low > 76
Escherichia coli ECRC62 0.10 BNILDI_18285 puuP putrescine/proton symporter PuuP 0.24 BNILDI_22705 ampG muropeptide MFS transporter AmpG low > 75
Escherichia coli BW25113 0.09 b1296 ycjJ putative amino acid/amine transport protein (VIMSS) 0.24 b0433 ampG muropeptide transporter (NCBI) low > 76
Escherichia coli ECRC98 0.09 JDDGAC_04995 puuP putrescine/proton symporter PuuP 0.24 JDDGAC_12010 ampG muropeptide MFS transporter AmpG low > 87
Escherichia coli ECRC100 0.09 OKFHMN_02450 puuP putrescine/proton symporter PuuP 0.24 OKFHMN_08355 ampG muropeptide MFS transporter AmpG low > 79
Escherichia coli ECRC99 0.09 KEDOAH_26325 puuP putrescine/proton symporter PuuP 0.24 KEDOAH_19610 ampG muropeptide MFS transporter AmpG — —
Escherichia coli ECRC102 0.09 NIAGMN_26620 puuP putrescine/proton symporter PuuP 0.24 NIAGMN_06410 ampG muropeptide MFS transporter AmpG low > 80
Escherichia coli ECRC101 0.09 MCAODC_15820 puuP putrescine/proton symporter PuuP 0.24 MCAODC_27580 ampG muropeptide MFS transporter AmpG low > 87
Dickeya dianthicola ME23 0.09 DZA65_RS10150 APC family permease 0.23 DZA65_RS05990 muropeptide MFS transporter AmpG 0.37 21
Variovorax sp. OAS795 0.09 ABID97_RS19505 ethanolamine permease 0.21 ABID97_RS03830 AmpG family muropeptide MFS transporter low > 91
Pseudomonas sp. S08-1 0.09 OH686_09405 Ethanolamine permease 0.10 OH686_08200 AmpG permease low > 80
Erwinia tracheiphila SCR3 0.09 LU632_RS03070 aroP aromatic amino acid transporter AroP 0.20 LU632_RS18370 ampG muropeptide MFS transporter AmpG low > 73
Erwinia tracheiphila HP pepo 2.2 0.09 IJEDHG_05800 aroP aromatic amino acid transporter AroP 0.20 IJEDHG_16420 ampG muropeptide MFS transporter AmpG low > 61

Not shown: 23 genomes with orthologs for GFF2570 only; 30 genomes with orthologs for GFF1632 only