Conservation of cofitness between GFF1683 and GFF1504 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF1683 Tyrosine-specific transport protein 1.0 GFF1504 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) 0.78 15
Escherichia coli ECRC100 0.84 OKFHMN_26035 tyrP tyrosine transporter TyrP 0.88 OKFHMN_18155 deaD ATP-dependent RNA helicase DeaD low > 79
Escherichia coli ECRC99 0.84 KEDOAH_02070 tyrP tyrosine transporter TyrP 0.88 KEDOAH_09995 deaD ATP-dependent RNA helicase DeaD — —
Escherichia coli ECRC101 0.84 MCAODC_19370 tyrP tyrosine transporter TyrP 0.88 MCAODC_08675 deaD ATP-dependent RNA helicase DeaD low > 87
Escherichia coli ECRC98 0.84 JDDGAC_00610 tyrP tyrosine transporter TyrP 0.88 JDDGAC_21780 deaD ATP-dependent RNA helicase DeaD low > 87
Escherichia coli ECRC102 0.84 NIAGMN_02030 tyrP tyrosine transporter TyrP 0.88 NIAGMN_15915 deaD ATP-dependent RNA helicase DeaD low > 80
Escherichia coli ECRC62 0.84 BNILDI_15265 tyrP tyrosine transporter TyrP 0.87 BNILDI_01580 deaD ATP-dependent RNA helicase DeaD 0.61 48
Escherichia coli ECOR38 0.84 HEPCGN_04455 tyrP tyrosine transporter TyrP 0.87 HEPCGN_17030 deaD ATP-dependent RNA helicase DeaD low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.84 OHPLBJKB_01822 Tyrosine-specific transport protein 0.87 OHPLBJKB_00538 ATP-dependent RNA helicase DeaD low > 74
Escherichia coli BL21 0.84 ECD_01875 tyrosine transporter 0.87 ECD_03029 ATP-dependent RNA helicase low > 61
Escherichia fergusonii Becca 0.84 EFB2_02039 Tyrosine-specific transport protein 0.87 EFB2_00661 ATP-dependent RNA helicase DeaD low > 86
Escherichia coli Nissle 1917 0.84 ECOLIN_RS10865 tyrosine transporter TyrP 0.87 ECOLIN_RS18165 ATP-dependent RNA helicase DeaD low > 55
Escherichia coli ECOR27 0.84 NOLOHH_16475 tyrP tyrosine transporter TyrP 0.87 NOLOHH_09955 deaD ATP-dependent RNA helicase DeaD low > 76
Escherichia coli BW25113 0.84 b1907 tyrP tyrosine transporter (NCBI) 0.87 b3162 deaD inducible ATP-independent RNA helicase (VIMSS) low > 76
Klebsiella michiganensis M5al 0.77 BWI76_RS18295 tyrosine transporter TyrP 0.86 BWI76_RS25055 DEAD/DEAH family ATP-dependent RNA helicase — —
Enterobacter asburiae PDN3 0.76 EX28DRAFT_0645 aromatic amino acid transport protein 0.85 EX28DRAFT_3211 Superfamily II DNA and RNA helicases — —
Enterobacter sp. TBS_079 0.75 MPMX20_02818 Tyrosine-specific transport protein 0.86 MPMX20_04066 ATP-dependent RNA helicase DeaD low > 85
Klebsiella pneumoniae MKP103 0.73 KDGMDA_25560 tyrosine transporter TyrP 0.85 KDGMDA_05860 DEAD/DEAH family ATP-dependent RNA helicase low > 95
Serratia liquefaciens MT49 0.71 IAI46_17525 tyrosine transporter TyrP 0.80 IAI46_01970 DEAD/DEAH family ATP-dependent RNA helicase low > 87
Pectobacterium carotovorum WPP14 0.69 HER17_RS15520 tyrosine transporter TyrP 0.79 HER17_RS18175 DEAD/DEAH family ATP-dependent RNA helicase low > 75
Shewanella oneidensis MR-1 0.45 SO2065 tyrP tyrosine-specific transport protein (NCBI ptt file) 0.43 SO4034 deaD ATP-dependent RNA helicase DeaD (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.45 Shewana3_1846 aromatic amino acid transporter (RefSeq) 0.44 Shewana3_3595 DEAD/DEAH box helicase domain-containing protein (RefSeq) low > 73
Vibrio cholerae E7946 ATCC 55056 0.43 CSW01_18035 tyrosine transporter TyrP 0.38 CSW01_18185 DEAD/DEAH box family ATP-dependent RNA helicase low > 62
Shewanella loihica PV-4 0.33 Shew_3188 aromatic amino acid permease (RefSeq) 0.47 Shew_0531 DEAD/DEAH box helicase domain-containing protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.30 Sama_2939 tyrosine-specific transport protein, putative (RefSeq) 0.46 Sama_0512 ATP-dependent RNA helicase DeaD (RefSeq) low > 62

Not shown: 1 genomes with orthologs for GFF1683 only; 54 genomes with orthologs for GFF1504 only