Conservation of cofitness between EX31_RS05785 and EX31_RS23245 in Rahnella sp. WP5

67 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rahnella sp. WP5 1.0 EX31_RS05785 superoxide dismutase [Mn] 1.0 EX31_RS23245 asparagine synthase B 0.89 7
Enterobacter sp. TBS_079 0.89 MPMX20_04559 Superoxide dismutase [Mn] 0.91 MPMX20_01320 Asparagine synthetase B [glutamine-hydrolyzing] 0.48 8
Dickeya dianthicola ME23 0.88 DZA65_RS00285 superoxide dismutase [Mn] 0.93 DZA65_RS06685 asparagine synthase B — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.88 GFF2276 Manganese superoxide dismutase (EC 1.15.1.1) 0.91 GFF4582 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) low > 78
Enterobacter asburiae PDN3 0.88 EX28DRAFT_4384 Superoxide dismutase 0.91 EX28DRAFT_2301 asparagine synthase (glutamine-hydrolyzing) low > 76
Escherichia coli ECRC98 0.88 JDDGAC_17495 sodA superoxide dismutase [Mn] 0.92 JDDGAC_10830 asnB asparagine synthase B low > 87
Escherichia coli ECRC100 0.88 OKFHMN_13870 sodA superoxide dismutase [Mn] 0.92 OKFHMN_07180 asnB asparagine synthase B low > 79
Klebsiella michiganensis M5al 0.88 BWI76_RS00705 superoxide dismutase 0.91 BWI76_RS08180 asparagine synthase B — —
Escherichia coli ECRC102 0.88 NIAGMN_11625 sodA superoxide dismutase [Mn] 0.92 NIAGMN_05235 asnB asparagine synthase B low > 80
Escherichia coli ECOR27 0.88 NOLOHH_06005 sodA superoxide dismutase [Mn] 0.92 NOLOHH_23560 asnB asparagine synthase B low > 76
Escherichia coli ECRC99 0.88 KEDOAH_14285 sodA superoxide dismutase [Mn] 0.92 KEDOAH_20790 asnB asparagine synthase B — —
Escherichia coli ECRC62 0.88 BNILDI_05520 sodA superoxide dismutase [Mn] 0.92 BNILDI_21565 asnB asparagine synthase B low > 75
Escherichia coli ECRC101 0.88 MCAODC_04370 sodA superoxide dismutase [Mn] 0.92 MCAODC_26395 asnB asparagine synthase B low > 88
Escherichia coli BL21 0.88 ECD_03794 superoxide dismutase, Mn 0.92 ECD_00631 asparagine synthetase B low > 61
Klebsiella pneumoniae MKP103 0.87 KDGMDA_09215 superoxide dismutase [Mn] 0.92 KDGMDA_16540 asparagine synthase B low > 95
Escherichia coli BW25113 0.87 b3908 sodA superoxide dismutase, manganese (VIMSS) 0.92 b0674 asnB asparagine synthetase B (NCBI) low > 76
Escherichia coli ECOR38 0.87 HEPCGN_12515 sodA superoxide dismutase [Mn] 0.92 HEPCGN_01050 asnB asparagine synthase B low > 88
Dickeya dianthicola 67-19 0.87 HGI48_RS00285 superoxide dismutase [Mn] 0.93 HGI48_RS06340 asparagine synthase B — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.87 OHPLBJKB_04142 Superoxide dismutase [Mn] 0.92 OHPLBJKB_03042 Asparagine synthetase B [glutamine-hydrolyzing] low > 74
Escherichia coli Nissle 1917 0.87 ECOLIN_RS22515 superoxide dismutase [Mn] 0.92 ECOLIN_RS03600 asparagine synthase B low > 55
Escherichia fergusonii Becca 0.87 EFB2_04709 Superoxide dismutase [Mn] 0.92 EFB2_03429 Asparagine synthetase B [glutamine-hydrolyzing] low > 86
Pectobacterium carotovorum WPP14 0.86 HER17_RS21110 superoxide dismutase [Mn] 0.92 HER17_RS15120 asparagine synthase B — —
Erwinia tracheiphila SCR3 0.85 LU632_RS00125 sodA superoxide dismutase [Mn] 0.89 LU632_RS16265 asnB asparagine synthase B — —
Erwinia tracheiphila HP pepo 2.2 0.85 IJEDHG_09920 sodA superoxide dismutase [Mn] 0.89 IJEDHG_02320 Asparagine synthase B — —
Serratia liquefaciens MT49 0.84 IAI46_00200 superoxide dismutase [Mn] 0.93 IAI46_06065 asparagine synthase B — —
Erwinia amylovora T8 0.84 OLJFJH_05035 superoxide dismutase [Mn] 0.89 OLJFJH_17105 Asparagine synthase B — —
Pantoea sp. MT58 0.82 IAI47_18725 superoxide dismutase [Mn] 0.88 IAI47_13900 asparagine synthase B — —
Pantoea agglomerans CFBP13505 P0401 0.82 PagCFBP13505_RS15760 superoxide dismutase [Mn] 0.88 PagCFBP13505_RS03405 asparagine synthase B — —
Xanthomonas campestris pv. campestris strain 8004 0.59 Xcc-8004.2280.1 Manganese superoxide dismutase (EC 1.15.1.1) 0.56 Xcc-8004.3537.1 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) — —
Pseudomonas simiae WCS417 0.56 PS417_04315 superoxide dismutase 0.13 PS417_19230 asparagine synthase low > 88
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS04370 superoxide dismutase 0.13 PFLU_RS21200 N-acetylglutaminylglutamine amidotransferase low > 109
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_07065 superoxide dismutase 0.13 AO356_03575 asparagine synthase low > 104
Pseudomonas fluorescens SBW25 0.55 PFLU_RS04370 superoxide dismutase 0.13 PFLU_RS21200 N-acetylglutaminylglutamine amidotransferase low > 109
Pseudomonas lactucae CFBP13502 0.55 GEMAOFIL_01069 Superoxide dismutase [Mn/Fe] 0.13 GEMAOFIL_02050 Asparagine synthetase [glutamine-hydrolyzing] 1 low > 93
Pseudomonas sp. DMC3 0.55 GFF1822 Superoxide dismutase [Mn/Fe] 0.13 GFF4701 Asparagine synthetase [glutamine-hydrolyzing] 1 low > 89
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_1086 Manganese superoxide dismutase (EC 1.15.1.1) 0.13 Pf1N1B4_374 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) low > 87
Pseudomonas aeruginosa PA14 0.55 IKLFDK_01740 Superoxide dismutase [Mn] 0.15 IKLFDK_10195 asparagine synthase (glutamine-hydrolyzing) low > 100
Pseudomonas sp. RS175 0.54 PFR28_00167 Superoxide dismutase [Mn/Fe] 0.13 PFR28_00883 Asparagine synthetase [glutamine-hydrolyzing] 1 low > 88
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_3274 Manganese superoxide dismutase (EC 1.15.1.1) 0.13 Pf6N2E2_2542 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) low > 103
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_5020 Manganese superoxide dismutase (EC 1.15.1.1) 0.13 PfGW456L13_2154 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) low > 87
Pseudomonas sp. BP01 0.54 JOY50_RS11100 superoxide dismutase 0.13 JOY50_RS16230 N-acetylglutaminylglutamine amidotransferase low > 84
Pseudomonas putida KT2440 0.54 PP_0946 superoxide dismutase (Mn) 0.13 PP_1750 asparagine synthetase low > 96
Cellulophaga baltica 18 0.52 M666_RS04120 superoxide dismutase 0.69 M666_RS00440 asparagine synthase B — —
Brevundimonas sp. GW460-12-10-14-LB2 0.51 A4249_RS00445 superoxide dismutase 0.14 A4249_RS01055 N-acetylglutaminylglutamine amidotransferase — —
Vibrio cholerae E7946 ATCC 55056 0.47 CSW01_13600 superoxide dismutase 0.78 CSW01_05055 asparagine synthase B low > 62
Rhodanobacter sp. FW510-T8 0.42 OKGIIK_03055 sodA superoxide dismutase [Fe] 0.58 OKGIIK_07005 asnB asparagine synthase B — —
Dyella japonica UNC79MFTsu3.2 0.41 ABZR86_RS09825 superoxide dismutase [Fe] 0.55 ABZR86_RS02815 asparagine synthase B low > 74
Rhodanobacter denitrificans FW104-10B01 0.41 LRK54_RS13820 superoxide dismutase 0.58 LRK54_RS00305 asparagine synthase B — —
Rhodanobacter denitrificans MT42 0.41 LRK55_RS13535 Fe-Mn family superoxide dismutase 0.58 LRK55_RS18205 asparagine synthase B — —
Rhodanobacter sp000427505 FW510-R12 0.41 LRK53_RS14780 superoxide dismutase 0.58 LRK53_RS09845 asparagine synthase B — —
Rhodospirillum rubrum S1H 0.41 Rru_A1760 Superoxide dismutase (NCBI) 0.14 Rru_A1989 Asparagine synthase, glutamine-hydrolyzing (NCBI) — —
Sinorhizobium meliloti 1021 0.40 SMc00043 superoxide dismutase Fe protein 0.14 SM_b20481 asparagine synthetase (glutamine amidotransferase) protein — —
Lysobacter sp. OAE881 0.39 ABIE51_RS15385 Fe-Mn family superoxide dismutase 0.54 ABIE51_RS07005 asparagine synthase B — —
Pseudomonas stutzeri RCH2 0.39 Psest_1164 Superoxide dismutase 0.13 Psest_2930 asparagine synthase (glutamine-hydrolyzing) — —
Shewanella loihica PV-4 0.38 Shew_1834 superoxide dismutase (RefSeq) 0.71 Shew_1509 asnB asparagine synthetase B (RefSeq) — —
Pseudomonas sp. S08-1 0.38 OH686_07215 Superoxide dismutase [Fe] 0.13 OH686_20985 asparagine synthase (glutamine-hydrolyzing) — —
Shewanella oneidensis MR-1 0.38 SO2881 SodB superoxide dismutase, Fe (NCBI ptt file) 0.72 SO2767 asnB-1 asparagine synthetase B, glutamine-hydrolyzing (NCBI ptt file) — —
Magnetospirillum magneticum AMB-1 0.38 AMB_RS12630 superoxide dismutase 0.15 AMB_RS06425 asparagine synthase (glutamine-hydrolyzing) — —
Bacteroides ovatus ATCC 8483 0.38 BACOVA_02363 superoxide dismutase, Mn/Fe family 0.65 BACOVA_03758 asparagine synthase (glutamine-hydrolyzing) low > 96
Shewanella sp. ANA-3 0.38 Shewana3_1639 manganese and iron superoxide dismutase (RefSeq) 0.72 Shewana3_2549 asnB asparagine synthetase B (RefSeq) — —
Bacteroides stercoris CC31F 0.37 HMPREF1181_RS16510 superoxide dismutase 0.64 HMPREF1181_RS16045 asparagine synthase B low > 56
Bacteroides thetaiotaomicron VPI-5482 0.37 BT0655 superoxide dismutase [Fe] (NCBI ptt file) 0.66 BT0551 asparagine synthetase B [glutamine-hydrolyzing] (NCBI ptt file) low > 81
Shewanella amazonensis SB2B 0.36 Sama_1920 superoxide dismutase (RefSeq) 0.70 Sama_2101 asnB asparagine synthetase B (RefSeq) — —
Parabacteroides merdae CL09T00C40 0.36 HMPREF1078_RS07570 superoxide dismutase 0.65 HMPREF1078_RS01260 asparagine synthase B low > 61
Phocaeicola dorei CL03T12C01 0.36 ABI39_RS17740 superoxide dismutase 0.65 ABI39_RS20695 asparagine synthase B low > 72
Phocaeicola vulgatus CL09T03C04 0.36 HMPREF1058_RS03300 superoxide dismutase 0.66 HMPREF1058_RS06930 asparagine synthase B low > 67
Alteromonas macleodii MIT1002 0.35 MIT1002_01234 Superoxide dismutase [Fe] 0.73 MIT1002_01266 Asparagine synthetase B [glutamine-hydrolyzing] — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.33 GFF4512 Superoxide dismutase [Fe] (EC 1.15.1.1) 0.54 GFF1173 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) — —

Not shown: 48 genomes with orthologs for EX31_RS05785 only; 3 genomes with orthologs for EX31_RS23245 only