Conservation of cofitness between EX28DRAFT_2669 and EX28DRAFT_0090 in Enterobacter asburiae PDN3

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Enterobacter asburiae PDN3 1.0 EX28DRAFT_2669 Predicted amidohydrolase 1.0 EX28DRAFT_0090 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein 0.49 19
Enterobacter sp. TBS_079 0.98 MPMX20_00909 Omega-amidase YafV 0.96 MPMX20_03427 Membrane-bound lytic murein transglycosylase F low > 85
Klebsiella michiganensis M5al 0.92 BWI76_RS05465 amidohydrolase 0.74 BWI76_RS21275 lytic transglycosylase F low > 92
Klebsiella pneumoniae MKP103 0.90 KDGMDA_13725 amidohydrolase 0.75 KDGMDA_28400 membrane-bound lytic murein transglycosylase MltF low > 95
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF4099 Aliphatic amidase AmiE (EC 3.5.1.4) 0.77 GFF2461 Transglycosylase, Slt family low > 78
Escherichia coli BW25113 0.86 b0219 yafV predicted C-N hydrolase family amidase, NAD(P)-binding (NCBI) 0.77 b2558 mltF predicted periplasmic binding protein/transglycosylase (RefSeq) low > 76
Escherichia coli ECOR27 0.85 NOLOHH_02165 yafV 2-oxoglutaramate amidase 0.77 NOLOHH_13140 mltF membrane-bound lytic murein transglycosylase MltF low > 76
Escherichia fergusonii Becca 0.85 EFB2_03798 Omega-amidase YafV 0.77 EFB2_01338 Membrane-bound lytic murein transglycosylase F low > 86
Escherichia coli ECRC98 0.85 JDDGAC_13415 yafV 2-oxoglutaramate amidase 0.77 JDDGAC_25130 mltF membrane-bound lytic murein transglycosylase MltF low > 87
Escherichia coli ECRC101 0.85 MCAODC_00310 yafV 2-oxoglutaramate amidase 0.77 MCAODC_11995 mltF membrane-bound lytic murein transglycosylase MltF low > 87
Escherichia coli ECRC102 0.85 NIAGMN_07650 yafV 2-oxoglutaramate amidase 0.77 NIAGMN_19235 mltF membrane-bound lytic murein transglycosylase MltF low > 80
Escherichia coli ECRC100 0.85 OKFHMN_09790 yafV 2-oxoglutaramate amidase 0.77 OKFHMN_21465 mltF membrane-bound lytic murein transglycosylase MltF low > 79
Escherichia coli HS(pFamp)R (ATCC 700891) 0.85 OHPLBJKB_03420 Omega-amidase YafV 0.77 OHPLBJKB_01149 Membrane-bound lytic murein transglycosylase F low > 74
Escherichia coli ECRC99 0.85 KEDOAH_18365 yafV 2-oxoglutaramate amidase 0.77 KEDOAH_06755 mltF membrane-bound lytic murein transglycosylase MltF — —
Escherichia coli Nissle 1917 0.85 ECOLIN_RS01735 2-oxoglutaramate amidase 0.77 ECOLIN_RS14475 membrane-bound lytic murein transglycosylase MltF low > 55
Escherichia coli ECOR38 0.85 HEPCGN_07895 yafV 2-oxoglutaramate amidase 0.77 HEPCGN_20610 mltF membrane-bound lytic murein transglycosylase MltF low > 88
Escherichia coli ECRC62 0.84 BNILDI_00360 yafV 2-oxoglutaramate amidase 0.77 BNILDI_11940 mltF membrane-bound lytic murein transglycosylase MltF low > 75
Pantoea sp. MT58 0.78 IAI47_15230 amidohydrolase 0.58 IAI47_04925 membrane-bound lytic murein transglycosylase MltF low > 76
Pantoea agglomerans CFBP13505 P0401 0.77 PagCFBP13505_RS09925 amidohydrolase 0.58 PagCFBP13505_RS14815 membrane-bound lytic murein transglycosylase MltF low > 74
Pectobacterium carotovorum WPP14 0.75 HER17_RS04570 amidohydrolase 0.55 HER17_RS05905 membrane-bound lytic murein transglycosylase MltF low > 75
Dickeya dadantii 3937 0.72 DDA3937_RS16630 amidohydrolase 0.58 DDA3937_RS15660 membrane-bound lytic murein transglycosylase MltF low > 74
Erwinia amylovora T8 0.71 OLJFJH_18505 amidohydrolase 0.57 OLJFJH_10300 membrane-bound lytic murein transglycosylase MltF low > 58
Dickeya dianthicola 67-19 0.71 HGI48_RS16700 amidohydrolase 0.59 HGI48_RS15755 membrane-bound lytic murein transglycosylase MltF low > 71
Dickeya dianthicola ME23 0.70 DZA65_RS17790 amidohydrolase 0.59 DZA65_RS16835 membrane-bound lytic murein transglycosylase MltF low > 75
Rahnella sp. WP5 0.70 EX31_RS21070 amidohydrolase 0.57 EX31_RS21890 membrane-bound lytic murein transglycosylase MltF low > 89
Serratia liquefaciens MT49 0.69 IAI46_04295 amidohydrolase 0.56 IAI46_19480 membrane-bound lytic murein transglycosylase MltF low > 87
Echinicola vietnamensis KMM 6221, DSM 17526 0.48 Echvi_1887 Predicted amidohydrolase 0.15 Echvi_0686 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein low > 79
Pseudomonas sp. BP01 0.47 JOY50_RS22735 amidohydrolase 0.30 JOY50_RS11520 mltF membrane-bound lytic murein transglycosylase MltF low > 84
Pseudomonas orientalis W4I3 0.47 QF045_RS25335 amidohydrolase 0.29 QF045_RS25235 membrane-bound lytic murein transglycosylase MltF low > 93
Pseudomonas aeruginosa MRSN321 0.47 DY961_RS13935 amidohydrolase 0.28 DY961_RS14140 mltF;go_component=membrane|0016020||IEA;go_function=lytic membrane-bound lytic murein transglycosylase MltF low > 100
Pseudomonas aeruginosa PUPa3 0.47 DQ20_RS43165 amidohydrolase 0.28 DQ20_RS42975 mltF;go_component=membrane|0016020||IEA;go_function=lytic membrane-bound lytic murein transglycosylase MltF low > 101
Pseudomonas segetis P6 0.47 MPMX49_01524 Omega-amidase YafV 0.27 MPMX49_01556 Membrane-bound lytic murein transglycosylase F low > 75
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_06560 carbon-nitrogen hydrolase 0.30 AO356_17515 murein transglycosylase low > 104
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_15920 carbon-nitrogen hydrolase 0.29 AO353_04490 murein transglycosylase low > 101
Pseudomonas syringae pv. syringae B728a 0.47 Psyr_1254 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 0.27 Psyr_1268 extracellular solute-binding protein, family 3:SLT low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.47 Psyr_1254 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 0.27 Psyr_1268 extracellular solute-binding protein, family 3:SLT low > 86
Pseudomonas sp. S08-1 0.47 OH686_17560 Aliphatic amidase AmiE 0.28 OH686_17625 Membrane-bound lytic murein transglycosylase F low > 80
Pseudomonas sp. SVBP6 0.47 COO64_RS03980 amidohydrolase 0.29 COO64_RS04690 mltF membrane-bound lytic murein transglycosylase MltF low > 93
Pseudomonas simiae WCS417 0.47 PS417_23115 carbon-nitrogen hydrolase 0.29 PS417_23025 murein transglycosylase low > 88
Pseudomonas putida KT2440 0.47 PP_0859 putative ketoglutaramate omega-amidase 0.29 PP_1036 membrane-bound lytic murein transglycosylase F low > 96
Pseudomonas aeruginosa PA14 0.47 IKLFDK_19555 amidohydrolase 0.28 IKLFDK_19215 membrane-bound lytic murein transglycosylase MltF low > 98
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS24770 amidohydrolase 0.29 PFLU_RS24690 membrane-bound lytic murein transglycosylase MltF low > 109
Pseudomonas fluorescens SBW25 0.47 PFLU_RS24770 amidohydrolase 0.29 PFLU_RS24690 membrane-bound lytic murein transglycosylase MltF low > 109
Pseudomonas sp. RS175 0.46 PFR28_00303 Omega-amidase YafV 0.30 PFR28_03519 Membrane-bound lytic murein transglycosylase F low > 88
Pseudomonas sp. DMC3 0.46 GFF4333 Omega-amidase YafV 0.30 GFF1961 Membrane-bound lytic murein transglycosylase F low > 89
Pseudomonas fluorescens FW300-N1B4 0.46 Pf1N1B4_848 Aliphatic amidase AmiE (EC 3.5.1.4) 0.30 Pf1N1B4_888 Transglycosylase, Slt family low > 87
Pseudomonas fluorescens GW456-L13 0.46 PfGW456L13_4855 Aliphatic amidase AmiE (EC 3.5.1.4) 0.30 PfGW456L13_4836 Transglycosylase, Slt family low > 87
Pseudomonas stutzeri RCH2 0.45 Psest_1269 Predicted amidohydrolase 0.29 Psest_1217 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein low > 67
Kangiella aquimarina DSM 16071 0.18 B158DRAFT_2071 Predicted amidohydrolase 0.34 B158DRAFT_2243 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein low > 40

Not shown: 20 genomes with orthologs for EX28DRAFT_2669 only; 10 genomes with orthologs for EX28DRAFT_0090 only