Conservation of cofitness between CSW01_19405 and CSW01_19480 in Vibrio cholerae E7946 ATCC 55056

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_19405 ornithine decarboxylase SpeF 1.0 CSW01_19480 HlyD family type I secretion periplasmic adaptor subunit 0.42 13
Shewanella amazonensis SB2B 0.90 Sama_3334 ornithine decarboxylase (RefSeq) 0.48 Sama_3260 HlyD family secretion protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.88 Shewana3_3871 ornithine decarboxylase (RefSeq) 0.47 Shewana3_0380 HlyD family type I secretion membrane fusion protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.87 SO0314 speF ornithine decarboxylase, inducible (NCBI ptt file) 0.47 SO4319 HlyD family secretion protein (NCBI ptt file) low > 76
Serratia liquefaciens MT49 0.78 IAI46_02040 ornithine decarboxylase SpeF 0.12 IAI46_08100 HlyD family type I secretion periplasmic adaptor subunit low > 86
Enterobacter asburiae PDN3 0.74 EX28DRAFT_2285 ornithine decarboxylase SpeF 0.25 EX28DRAFT_1343 type I secretion membrane fusion protein, HlyD family low > 76
Escherichia coli Nissle 1917 0.74 ECOLIN_RS03740 ornithine decarboxylase SpeF 0.24 ECOLIN_RS01695 HlyD family type I secretion periplasmic adaptor subunit — —
Escherichia coli ECRC99 0.73 KEDOAH_20880 speF ornithine decarboxylase SpeF 0.22 KEDOAH_19930 emrA hemolysin D — —
Escherichia coli ECRC102 0.73 NIAGMN_05145 speF ornithine decarboxylase SpeF 0.22 NIAGMN_06090 emrA hemolysin D low > 80
Escherichia coli ECRC100 0.73 OKFHMN_07090 speF ornithine decarboxylase SpeF 0.22 OKFHMN_08040 emrA hemolysin D low > 79
Escherichia coli ECRC101 0.73 MCAODC_26305 speF ornithine decarboxylase SpeF 0.22 MCAODC_27255 emrA hemolysin D low > 88
Escherichia coli ECRC98 0.73 JDDGAC_10740 speF ornithine decarboxylase SpeF 0.22 JDDGAC_11685 emrA hemolysin D low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.73 GFF4604 Ornithine decarboxylase (EC 4.1.1.17) 0.24 GFF4153 Type I secretion system, membrane fusion protein LapC low > 78
Enterobacter sp. TBS_079 0.73 MPMX20_01336 Inducible ornithine decarboxylase 0.25 MPMX20_02202 Type I secretion system membrane fusion protein PrsE low > 85
Escherichia coli ECOR38 0.73 HEPCGN_01145 speF ornithine decarboxylase SpeF 0.22 HEPCGN_06675 emrA hemolysin D low > 88
Rahnella sp. WP5 0.72 EX31_RS02805 ornithine decarboxylase SpeF 0.25 EX31_RS19255 HlyD family efflux transporter periplasmic adaptor subunit low > 89
Klebsiella michiganensis M5al 0.70 BWI76_RS24175 ornithine decarboxylase 0.23 BWI76_RS10025 secretion protein HlyD low > 92
Erwinia amylovora T8 0.68 OLJFJH_08475 ornithine decarboxylase 0.13 OLJFJH_04725 hemolysin D low > 58
Pectobacterium carotovorum WPP14 0.68 HER17_RS16680 ornithine decarboxylase 0.38 HER17_RS05855 HlyD family type I secretion periplasmic adaptor subunit low > 75
Pantoea agglomerans CFBP13505 P0401 0.68 PagCFBP13505_RS16150 ornithine decarboxylase 0.26 PagCFBP13505_RS00495 HlyD family efflux transporter periplasmic adaptor subunit low > 74
Pantoea sp. MT58 0.67 IAI47_03545 ornithine decarboxylase 0.26 IAI47_06510 HlyD family efflux transporter periplasmic adaptor subunit low > 76
Rhizobium sp. OAE497 0.48 ABIE40_RS23765 ornithine decarboxylase 0.30 ABIE40_RS22050 HlyD family type I secretion periplasmic adaptor subunit low > 107
Magnetospirillum magneticum AMB-1 0.40 AMB_RS05630 amino acid decarboxylase 0.24 AMB_RS15920 HlyD family type I secretion periplasmic adaptor subunit low > 64
Azospirillum sp. SherDot2 0.39 MPMX19_05197 Inducible ornithine decarboxylase 0.22 MPMX19_03373 Type I secretion system membrane fusion protein PrsE low > 112
Azospirillum brasilense Sp245 0.39 AZOBR_RS27535 amino acid decarboxylase 0.22 AZOBR_RS18215 hypothetical protein low > 97
Pseudomonas sp. BP01 0.33 JOY50_RS10670 ornithine decarboxylase 0.34 JOY50_RS28175 HlyD family type I secretion periplasmic adaptor subunit — —

Not shown: 15 genomes with orthologs for CSW01_19405 only; 44 genomes with orthologs for CSW01_19480 only