| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_12695 | | lactate dehydrogenase | 1.0 | CSW01_19115 | | AraC family transcriptional regulator | 0.48 | 13 |
| Paraburkholderia sabiae LMG 24235 | 0.51 | QEN71_RS12185 | | D-2-hydroxyacid dehydrogenase | 0.31 | QEN71_RS04420 | | AraC family transcriptional regulator | low | > 153 |
| Agrobacterium fabrum C58 | 0.49 | Atu5333 | | 2-hydroxyacid dehydrogenase | 0.29 | Atu1081 | | transcriptional regulator, AraC family | — | — |
| Burkholderia phytofirmans PsJN | 0.49 | BPHYT_RS30460 | | glycerate dehydrogenase | 0.31 | BPHYT_RS14560 | | AraC family transcriptional regulator | low | > 109 |
| Pectobacterium carotovorum WPP14 | 0.46 | HER17_RS12825 | | 2-hydroxyacid dehydrogenase | 0.42 | HER17_RS03055 | | AraC family transcriptional regulator | low | > 75 |
| Pseudomonas sp. BP01 | 0.44 | JOY50_RS06325 | | D-2-hydroxyacid dehydrogenase | 0.34 | JOY50_RS10660 | | AraC family transcriptional regulator | low | > 84 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.44 | H281DRAFT_03356 | | glycerate dehydrogenase | 0.30 | H281DRAFT_04325 | | transcriptional regulator, AraC family | low | > 103 |
| Pantoea agglomerans CFBP13505 P0401 | 0.41 | PagCFBP13505_RS14205 | | D-2-hydroxyacid dehydrogenase | 0.26 | PagCFBP13505_RS21125 | | AraC family transcriptional regulator | low | > 74 |
| Pantoea sp. MT58 | 0.40 | IAI47_20620 | | D-2-hydroxyacid dehydrogenase | 0.26 | IAI47_17800 | | AraC family transcriptional regulator | low | > 76 |
| Pseudomonas segetis P6 | 0.39 | ACVTMO_RS18365 | | 2-hydroxyacid dehydrogenase | 0.33 | ACVTMO_RS08580 | | AraC family transcriptional regulator | low | > 75 |
| Pseudomonas sp. S08-1 | 0.39 | OH686_06340 | | D-3-phosphoglycerate dehydrogenase | 0.34 | OH686_19610 | | Transcriptional regulator, AraC family | low | > 80 |
| Pseudomonas sp. DMC3 | 0.37 | GFF4454 | | Glycerate dehydrogenase | 0.23 | GFF1069 | | HTH-type transcriptional activator RhaS | low | > 89 |
| Pseudomonas fluorescens FW300-N2E2 | 0.37 | Pf6N2E2_3246 | | D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) | 0.21 | Pf6N2E2_1100 | | L-rhamnose operon transcriptional activator RhaR | — | — |
| Pseudomonas lactucae CFBP13502 | 0.37 | GEMAOFIL_01109 | | Putative 2-hydroxyacid dehydrogenase | 0.22 | GEMAOFIL_02770 | | HTH-type transcriptional activator RhaS | low | > 96 |
| Pseudomonas fluorescens FW300-N2C3 | 0.36 | AO356_06935 | | glycerate dehydrogenase | 0.21 | AO356_26135 | | AraC family transcriptional regulator | low | > 104 |
| Pseudomonas fluorescens FW300-N1B4 | 0.36 | Pf1N1B4_2954 | | D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) | 0.31 | Pf1N1B4_2318 | | FIG229276: Transcriptional regulator, AraC family | low | > 87 |
| Pseudomonas fluorescens SBW25-INTG | 0.36 | PFLU_RS04575 | | 2-hydroxyacid dehydrogenase | 0.23 | PFLU_RS13270 | | AraC family transcriptional regulator | low | > 109 |
| Pseudomonas simiae WCS417 | 0.36 | PS417_04530 | | glycerate dehydrogenase | 0.20 | PS417_14185 | | transcriptional regulator | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.36 | PFLU_RS04575 | | 2-hydroxyacid dehydrogenase | 0.23 | PFLU_RS13270 | | AraC family transcriptional regulator | low | > 109 |
| Pseudomonas orientalis W4I3 | 0.36 | QF045_RS07500 | | 2-hydroxyacid dehydrogenase | 0.23 | QF045_RS17305 | | AraC family transcriptional regulator | low | > 93 |
| Pseudomonas sp. RS175 | 0.35 | PFR28_03622 | | Putative 2-hydroxyacid dehydrogenase | 0.36 | PFR28_02269 | | HTH-type transcriptional activator RhaS | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.35 | AO353_15000 | | glycerate dehydrogenase | 0.30 | AO353_08275 | | AraC family transcriptional regulator | 0.20 | 55 |
| Shewanella loihica PV-4 | 0.35 | Shew_0887 | | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (RefSeq) | 0.65 | Shew_2537 | | AraC family transcriptional regulator (RefSeq) | low | > 60 |
| Pseudomonas sp. SVBP6 | 0.35 | COO64_RS03380 | | 2-hydroxyacid dehydrogenase | 0.34 | COO64_RS07890 | | AraC family transcriptional regulator | — | — |
| Pseudomonas stutzeri RCH2 | 0.35 | Psest_3223 | | Lactate dehydrogenase and related dehydrogenases | 0.20 | Psest_1369 | | AraC-type DNA-binding domain-containing proteins | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.34 | PfGW456L13_1617 | | D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) | 0.30 | PfGW456L13_988 | | FIG229276: Transcriptional regulator, AraC family | low | > 87 |
| Pseudomonas putida KT2440 | 0.34 | PP_0762 | | Glycerate dehydrogenase | 0.35 | PP_2383 | | Transcriptional regulator, AraC family | low | > 96 |
| Pseudomonas aeruginosa PUPa3 | 0.33 | DQ20_RS55745 | | 2-hydroxyacid dehydrogenase | 0.33 | DQ20_RS40485 | | AraC family transcriptional regulator | low | > 101 |
| Pseudomonas aeruginosa PA14 | 0.33 | IKLFDK_00375 | | 2-hydroxyacid dehydrogenase | 0.33 | IKLFDK_16740 | | AraC family transcriptional regulator | low | > 98 |
| Pseudomonas aeruginosa MRSN321 | 0.33 | DY961_RS28950 | | 2-hydroxyacid dehydrogenase | 0.34 | DY961_RS00550 | | AraC family transcriptional regulator | low | > 100 |
| Shewanella oneidensis MR-1 | 0.32 | SO3631 | hprA | glycerate dehydrogenase (NCBI ptt file) | 0.66 | SO1762 | | transcriptional regulator, AraC/XylS family (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.32 | Shewana3_3201 | | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (RefSeq) | 0.65 | Shewana3_2693 | | AraC family transcriptional regulator (RefSeq) | low | > 73 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.30 | DVU1412 | | D-isomer specific 2-hydroxyacid dehydrogenase family protein (TIGR) | 0.21 | DVU2886 | | transcriptional regulator, AraC family (TIGR) | low | > 55 |
| Rhizobium sp. OAE497 | 0.25 | ABIE40_RS25795 | | hydroxyacid dehydrogenase | 0.29 | ABIE40_RS13855 | | AraC family transcriptional regulator | low | > 107 |
| Paraburkholderia graminis OAS925 | 0.23 | ABIE53_003066 | | gluconate 2-dehydrogenase | 0.31 | ABIE53_003072 | | AraC-like DNA-binding protein | low | > 113 |
| Bosea sp. OAE506 | 0.23 | ABIE41_RS10570 | | 2-hydroxyacid dehydrogenase | 0.21 | ABIE41_RS12680 | | AraC family transcriptional regulator | low | > 77 |
| Azospirillum sp. SherDot2 | 0.22 | MPMX19_00296 | | (S)-sulfolactate dehydrogenase | 0.25 | MPMX19_01511 | | HTH-type transcriptional activator RhaR | low | > 112 |
| Dickeya dadantii 3937 | 0.21 | DDA3937_RS21080 | | glyoxylate/hydroxypyruvate reductase GhrB | 0.52 | DDA3937_RS14520 | | AraC family transcriptional regulator | low | > 74 |
| Ralstonia solanacearum PSI07 | 0.21 | RPSI07_RS02805 | | D-glycerate dehydrogenase | 0.21 | RPSI07_RS02595 | | AraC family transcriptional regulator | low | > 81 |
| Variovorax sp. SCN45 | 0.21 | GFF2715 | | 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) | 0.22 | GFF535 | | Transcriptional regulator, AraC family | low | > 127 |
| Klebsiella michiganensis M5al | 0.20 | BWI76_RS27925 | | D-isomer specific 2-hydroxyacid dehydrogenase | 0.25 | BWI76_RS13885 | | AraC family transcriptional regulator | — | — |
| Klebsiella pneumoniae MKP103 | 0.20 | KDGMDA_07690 | | glyoxylate/hydroxypyruvate reductase GhrB | 0.25 | KDGMDA_11200 | | AraC family transcriptional regulator | low | > 95 |
Not shown: 27 genomes with orthologs for CSW01_12695 only; 15 genomes with orthologs for CSW01_19115 only