Conservation of cofitness between CSW01_02565 and CSW01_19025 in Vibrio cholerae E7946 ATCC 55056

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02565 oxidative stress defense protein 1.0 CSW01_19025 LysR family transcriptional regulator 0.44 13
Shewanella sp. ANA-3 0.39 Shewana3_3626 hypothetical protein (RefSeq) 0.37 Shewana3_3800 LysR family transcriptional regulator (RefSeq) low > 73
Shewanella oneidensis MR-1 0.37 SO4070 conserved hypothetical protein (NCBI ptt file) 0.38 SO0369 transcriptional regulator, LysR family (NCBI ptt file) low > 76
Serratia liquefaciens MT49 0.32 IAI46_20915 oxidative stress defense protein 0.55 IAI46_20610 LysR family transcriptional regulator low > 87
Rahnella sp. WP5 0.32 EX31_RS21445 oxidative stress defense protein 0.30 EX31_RS16730 LysR family transcriptional regulator low > 89
Klebsiella pneumoniae MKP103 0.31 KDGMDA_04435 oxidative stress defense protein 0.28 KDGMDA_05040 LysR family transcriptional regulator low > 95
Erwinia amylovora T8 0.31 OLJFJH_08710 oxidative stress defense protein 0.25 OLJFJH_06945 HTH-type transcriptional activator AaeR low > 58
Dickeya dianthicola 67-19 0.31 HGI48_RS18420 oxidative stress defense protein 0.26 HGI48_RS19010 LysR family transcriptional regulator 0.39 64
Klebsiella michiganensis M5al 0.30 BWI76_RS23960 oxidative stress defense protein 0.27 BWI76_RS27965 LysR family transcriptional regulator low > 92
Pantoea agglomerans CFBP13505 P0401 0.30 PagCFBP13505_RS15990 oxidative stress defense protein 0.27 PagCFBP13505_RS08890 LysR family transcriptional regulator low > 74
Pantoea sp. MT58 0.29 IAI47_03710 oxidative stress defense protein 0.28 IAI47_20580 LysR family transcriptional regulator low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.28 GFF3017 Protein of unknown function DUF541 0.25 GFF2141 LysR family transcriptional regulator QseA low > 78
Escherichia coli ECRC102 0.28 NIAGMN_17180 yggE oxidative stress defense protein 0.25 NIAGMN_15520 aaeR HTH-type transcriptional activator AaeR low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.28 OHPLBJKB_00794 26 kDa periplasmic immunogenic protein 0.25 OHPLBJKB_00181 HTH-type transcriptional regulator DmlR low > 74
Escherichia coli BW25113 0.28 b2922 yggE hypothetical protein (NCBI) 0.25 b3521 yhjC predicted DNA-binding transcriptional regulator (RefSeq) low > 76
Escherichia coli ECOR27 0.28 NOLOHH_11325 yggE oxidative stress defense protein 0.25 NOLOHH_08195 yhjC Uncharacterized HTH-type transcriptional regulator YhjC low > 76
Escherichia coli ECRC99 0.28 KEDOAH_08725 yggE oxidative stress defense protein 0.25 KEDOAH_10390 aaeR HTH-type transcriptional activator AaeR — —
Escherichia fergusonii Becca 0.28 EFB2_00984 26 kDa periplasmic immunogenic protein 0.25 EFB2_00287 HTH-type transcriptional regulator DmlR low > 86
Escherichia coli BL21 0.28 ECD_02753 oxidative stress defense protein 0.25 ECD_03369 LysR family putative transcriptional regulator low > 61
Escherichia coli ECRC62 0.28 BNILDI_09860 yggE oxidative stress defense protein 0.25 BNILDI_03360 yhjC Uncharacterized HTH-type transcriptional regulator YhjC low > 75
Escherichia coli ECRC101 0.28 MCAODC_09935 yggE oxidative stress defense protein 0.25 MCAODC_08280 aaeR HTH-type transcriptional activator AaeR low > 87
Escherichia coli ECRC98 0.28 JDDGAC_23045 yggE oxidative stress defense protein 0.25 JDDGAC_21385 aaeR HTH-type transcriptional activator AaeR low > 87
Escherichia coli ECOR38 0.28 HEPCGN_18720 yggE oxidative stress defense protein 0.25 HEPCGN_15135 yhjC Uncharacterized HTH-type transcriptional regulator YhjC low > 88
Escherichia coli ECRC100 0.28 OKFHMN_19415 yggE oxidative stress defense protein 0.25 OKFHMN_17760 aaeR HTH-type transcriptional activator AaeR low > 79
Escherichia coli Nissle 1917 0.27 ECOLIN_RS16240 oxidative stress defense protein 0.25 ECOLIN_RS20140 LysR family transcriptional regulator low > 55
Xanthomonas campestris pv. campestris strain 8004 0.18 Xcc-8004.1878.1 Protein of unknown function DUF541 0.27 Xcc-8004.52.1 transcriptional regulator lysR family low > 74
Caulobacter crescentus NA1000 Δfur 0.18 CCNA_02378 SIMPL family protein 0.29 CCNA_02602 LysR-family transcriptional regulator low > 67
Caulobacter crescentus NA1000 0.18 CCNA_02378 SIMPL family protein 0.29 CCNA_02602 LysR-family transcriptional regulator low > 66
Lysobacter sp. OAE881 0.16 ABIE51_RS06775 SIMPL domain-containing protein 0.30 ABIE51_RS12770 LysR family transcriptional regulator low > 62
Dinoroseobacter shibae DFL-12 0.16 Dshi_0791 protein of unknown function DUF541 (RefSeq) 0.27 Dshi_0123 transcriptional regulator, LysR family (RefSeq) low > 64
Alteromonas macleodii MIT1002 0.12 MIT1002_02021 26 kDa periplasmic immunogenic protein precursor 0.76 MIT1002_03329 D-malate degradation protein R low > 70

Not shown: 12 genomes with orthologs for CSW01_02565 only; 44 genomes with orthologs for CSW01_19025 only