Conservation of cofitness between CSW01_06620 and CSW01_18475 in Vibrio cholerae E7946 ATCC 55056

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06620 EamA family transporter 1.0 CSW01_18475 D-alanyl-D-alanine endopeptidase 0.41 11
Pseudomonas sp. S08-1 0.49 OH686_02030 Threonine/homoserine exporter RhtA 0.58 OH686_12475 Murein-DD-endopeptidase low > 80
Pantoea agglomerans CFBP13505 P0401 0.49 PagCFBP13505_RS04130 threonine/homoserine exporter RhtA 0.55 PagCFBP13505_RS03915 D-alanyl-D-alanine endopeptidase low > 74
Pantoea sp. MT58 0.48 IAI47_13190 threonine/homoserine exporter RhtA 0.54 IAI47_13395 D-alanyl-D-alanine endopeptidase low > 76
Escherichia coli BW25113 0.47 b0813 rhtA threonine and homoserine efflux system (NCBI) 0.58 b2134 pbpG penicillin-binding protein 7 (VIMSS) low > 76
Escherichia coli Nissle 1917 0.47 ECOLIN_RS04335 threonine/homoserine exporter RhtA 0.58 ECOLIN_RS12500 D-alanyl-D-alanine endopeptidase low > 55
Escherichia fergusonii Becca 0.47 EFB2_03292 Threonine/homoserine exporter RhtA 0.58 EFB2_01721 D-alanyl-D-alanine endopeptidase low > 86
Escherichia coli ECRC101 0.47 MCAODC_25415 rhtA threonine/homoserine exporter RhtA 0.58 MCAODC_14695 pbpG D-alanyl-D-alanine endopeptidase low > 88
Escherichia coli ECRC62 0.47 BNILDI_20830 rhtA threonine/homoserine exporter RhtA 0.58 BNILDI_14135 pbpG D-alanyl-D-alanine endopeptidase low > 75
Escherichia coli ECRC99 0.47 KEDOAH_21710 rhtA threonine/homoserine exporter RhtA 0.58 KEDOAH_04540 pbpG D-alanyl-D-alanine endopeptidase — —
Escherichia coli BL21 0.47 ECD_00780 threonine and homoserine efflux system 0.58 ECD_02064 D-alanyl-D-alanine endopeptidase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.47 OHPLBJKB_02900 Threonine/homoserine exporter RhtA 0.58 OHPLBJKB_01576 D-alanyl-D-alanine endopeptidase low > 74
Escherichia coli ECRC100 0.47 OKFHMN_06200 rhtA threonine/homoserine exporter RhtA 0.58 OKFHMN_23645 pbpG D-alanyl-D-alanine endopeptidase low > 79
Escherichia coli ECRC102 0.47 NIAGMN_04245 rhtA threonine/homoserine exporter RhtA 0.58 NIAGMN_21410 pbpG D-alanyl-D-alanine endopeptidase low > 80
Escherichia coli ECRC98 0.47 JDDGAC_09835 rhtA threonine/homoserine exporter RhtA 0.58 JDDGAC_27600 pbpG D-alanyl-D-alanine endopeptidase low > 87
Escherichia coli ECOR27 0.47 NOLOHH_22550 rhtA threonine/homoserine exporter RhtA 0.58 NOLOHH_15185 pbpG D-alanyl-D-alanine endopeptidase low > 76
Escherichia coli ECOR38 0.47 HEPCGN_01840 rhtA threonine/homoserine exporter RhtA 0.58 HEPCGN_02220 pbpG D-alanyl-D-alanine endopeptidase low > 88
Erwinia amylovora T8 0.47 OLJFJH_16440 threonine/homoserine exporter RhtA 0.53 OLJFJH_16650 D-alanyl-D-alanine endopeptidase low > 58
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF709 Putative DMT superfamily metabolite efflux protein precursor 0.57 GFF3811 Murein-DD-endopeptidase (EC 3.4.99.-) low > 78
Enterobacter sp. TBS_079 0.46 MPMX20_01443 Threonine/homoserine exporter RhtA 0.57 MPMX20_03103 D-alanyl-D-alanine endopeptidase low > 85
Pseudomonas segetis P6 0.46 MPMX49_02335 Threonine/homoserine exporter RhtA 0.59 MPMX49_00288 D-alanyl-D-alanine endopeptidase low > 75
Pectobacterium carotovorum WPP14 0.45 HER17_RS13050 threonine/homoserine exporter RhtA 0.58 HER17_RS13260 D-alanyl-D-alanine endopeptidase low > 75
Pseudomonas aeruginosa PA14 0.45 IKLFDK_06475 threonine/homoserine exporter RhtA 0.56 IKLFDK_03850 D-alanyl-D-alanine endopeptidase low > 100
Erwinia tracheiphila HP pepo 2.2 0.45 IJEDHG_19935 rhtA threonine/homoserine exporter RhtA 0.56 IJEDHG_19700 pbpG D-alanyl-D-alanine endopeptidase low > 61
Erwinia tracheiphila SCR3 0.45 LU632_RS09465 rhtA threonine/homoserine exporter RhtA 0.55 LU632_RS09265 pbpG D-alanyl-D-alanine endopeptidase low > 74
Pseudomonas putida KT2440 0.44 PP_2239 threonine and homoserine exporter 0.53 PP_3794 periplasmic murein D-alanyl-D-alanine endopeptidase low > 96
Klebsiella pneumoniae MKP103 0.44 KDGMDA_17245 threonine/homoserine exporter RhtA 0.57 KDGMDA_26535 D-alanyl-D-alanine endopeptidase low > 95
Dickeya dadantii 3937 0.44 DDA3937_RS08820 threonine/homoserine exporter RhtA 0.57 DDA3937_RS08735 D-alanyl-D-alanine endopeptidase low > 74
Pseudomonas sp. SVBP6 0.44 COO64_RS19475 rhtA threonine/homoserine exporter RhtA 0.55 COO64_RS10205 pbpG D-alanyl-D-alanine endopeptidase low > 93
Klebsiella michiganensis M5al 0.44 BWI76_RS08985 threonine/homoserine exporter RhtA 0.56 BWI76_RS19525 D-alanyl-D-alanine endopeptidase low > 92
Pseudomonas sp. BP01 0.44 JOY50_RS28385 rhtA threonine/homoserine exporter RhtA 0.53 JOY50_RS04855 pbpG D-alanyl-D-alanine endopeptidase — —
Enterobacter asburiae PDN3 0.43 EX28DRAFT_2173 Predicted permease, DMT superfamily 0.57 EX28DRAFT_0426 D-alanyl-D-alanine carboxypeptidase low > 76
Dickeya dianthicola ME23 0.43 DZA65_RS09210 threonine/homoserine exporter RhtA 0.57 DZA65_RS09125 D-alanyl-D-alanine endopeptidase low > 75
Serratia liquefaciens MT49 0.43 IAI46_07560 threonine/homoserine exporter RhtA 0.57 IAI46_06820 D-alanyl-D-alanine endopeptidase low > 86
Pseudomonas sp. RS175 0.43 PFR28_02904 Threonine/homoserine exporter RhtA 0.54 PFR28_01222 D-alanyl-D-alanine endopeptidase low > 88
Dickeya dianthicola 67-19 0.43 HGI48_RS08895 threonine/homoserine exporter RhtA 0.57 HGI48_RS08820 D-alanyl-D-alanine endopeptidase low > 71
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_3217 Protein of unknown function DUF6 0.55 Psyr_2414 murein-DD-endopeptidase, Serine peptidase, MEROPS family S11 low > 86
Pseudomonas fluorescens FW300-N2E3 0.42 AO353_19445 transporter 0.52 AO353_20135 D-alanyl-D-alanine endopeptidase low > 101
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_3217 Protein of unknown function DUF6 0.55 Psyr_2414 murein-DD-endopeptidase, Serine peptidase, MEROPS family S11 low > 86
Pseudomonas fluorescens FW300-N2C3 0.41 AO356_20980 transporter 0.53 AO356_01780 D-alanyl-D-alanine endopeptidase low > 104
Pseudomonas fluorescens FW300-N1B4 0.41 Pf1N1B4_187 Threonine and homoserine efflux system 0.51 Pf1N1B4_3942 Murein-DD-endopeptidase (EC 3.4.99.-) low > 87
Pseudomonas fluorescens GW456-L13 0.41 PfGW456L13_2322 Threonine and homoserine efflux system 0.52 PfGW456L13_2549 Murein-DD-endopeptidase (EC 3.4.99.-) low > 87
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_6083 Threonine and homoserine efflux system 0.53 Pf6N2E2_2222 Murein-DD-endopeptidase (EC 3.4.99.-) low > 103
Pseudomonas sp. DMC3 0.41 GFF4523 Threonine/homoserine exporter RhtA 0.51 GFF1440 D-alanyl-D-alanine endopeptidase low > 89
Rahnella sp. WP5 0.40 EX31_RS18895 threonine/homoserine exporter RhtA 0.54 EX31_RS23805 D-alanyl-D-alanine endopeptidase low > 89
Pseudomonas lactucae CFBP13502 0.40 GEMAOFIL_02120 Threonine/homoserine exporter RhtA 0.52 GEMAOFIL_03750 D-alanyl-D-alanine endopeptidase low > 93
Pseudomonas fluorescens SBW25 0.40 PFLU_RS10140 threonine/homoserine exporter RhtA 0.53 PFLU_RS19205 D-alanyl-D-alanine endopeptidase low > 109
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS10140 threonine/homoserine exporter RhtA 0.53 PFLU_RS19205 D-alanyl-D-alanine endopeptidase low > 109
Pseudomonas simiae WCS417 0.40 PS417_09510 transporter 0.53 PS417_17270 D-alanyl-D-alanine endopeptidase low > 88

Not shown: 30 genomes with orthologs for CSW01_06620 only; 4 genomes with orthologs for CSW01_18475 only