Conservation of cofitness between CSW01_03320 and CSW01_18425 in Vibrio cholerae E7946 ATCC 55056

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03320 serine-type D-Ala-D-Ala carboxypeptidase 1.0 CSW01_18425 oxidoreductase 0.50 19
Klebsiella pneumoniae MKP103 0.33 KDGMDA_05980 serine-type D-Ala-D-Ala carboxypeptidase 0.58 KDGMDA_23405 oxidoreductase low > 95
Klebsiella michiganensis M5al 0.32 BWI76_RS25165 serine-type D-Ala-D-Ala carboxypeptidase 0.55 BWI76_RS16460 oxidoreductase low > 92
Dickeya dianthicola ME23 0.32 DZA65_RS03175 serine-type D-Ala-D-Ala carboxypeptidase 0.24 DZA65_RS13000 aldo/keto reductase low > 75
Pectobacterium carotovorum WPP14 0.32 HER17_RS18335 serine-type D-Ala-D-Ala carboxypeptidase 0.24 HER17_RS09425 aldo/keto reductase low > 75
Enterobacter sp. TBS_079 0.32 MPMX20_04086 D-alanyl-D-alanine carboxypeptidase DacB 0.60 MPMX20_01990 Oxidoreductase YdhF low > 85
Enterobacter asburiae PDN3 0.32 EX28DRAFT_3234 D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family 0.61 EX28DRAFT_1644 Predicted oxidoreductase low > 76
Dickeya dianthicola 67-19 0.32 HGI48_RS03180 serine-type D-Ala-D-Ala carboxypeptidase 0.24 HGI48_RS12550 aldo/keto reductase low > 71
Escherichia coli ECOR27 0.32 NOLOHH_09840 dacB serine-type D-Ala-D-Ala carboxypeptidase 0.57 NOLOHH_17970 ydhF Oxidoreductase YdhF low > 76
Escherichia coli BW25113 0.32 b3182 dacB D-alanyl-D-alanine carboxypeptidase (NCBI) 0.57 b1647 ydhF predicted oxidoreductase (NCBI) low > 76
Escherichia fergusonii Becca 0.32 EFB2_00641 D-alanyl-D-alanine carboxypeptidase DacB 0.57 EFB2_02345 Oxidoreductase YdhF low > 86
Escherichia coli ECOR38 0.32 HEPCGN_16915 dacB serine-type D-Ala-D-Ala carboxypeptidase 0.57 HEPCGN_05835 ydhF Oxidoreductase YdhF low > 88
Escherichia coli Nissle 1917 0.32 ECOLIN_RS18325 serine-type D-Ala-D-Ala carboxypeptidase 0.57 ECOLIN_RS09185 aldo/keto reductase family oxidoreductase low > 55
Escherichia coli ECRC62 0.32 BNILDI_01695 dacB serine-type D-Ala-D-Ala carboxypeptidase 0.58 BNILDI_16760 ydhF Oxidoreductase YdhF low > 75
Escherichia coli BL21 0.32 ECD_03047 D-alanyl-D-alanine carboxypeptidase 0.57 ECD_01617 putative oxidoreductase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.32 OHPLBJKB_00518 D-alanyl-D-alanine carboxypeptidase DacB 0.57 OHPLBJKB_02078 Oxidoreductase YdhF low > 74
Dickeya dadantii 3937 0.32 DDA3937_RS03010 serine-type D-Ala-D-Ala carboxypeptidase 0.24 DDA3937_RS12495 aldo/keto reductase low > 74
Escherichia coli ECRC102 0.32 NIAGMN_15800 dacB serine-type D-Ala-D-Ala carboxypeptidase 0.51 NIAGMN_00615 ydhF Oxidoreductase YdhF low > 80
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.32 GFF2924 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) 0.58 GFF3627 Putative aldo/keto reductase low > 78
Escherichia coli ECRC101 0.32 MCAODC_08560 dacB serine-type D-Ala-D-Ala carboxypeptidase 0.51 MCAODC_17960 ydhF Oxidoreductase YdhF low > 88
Escherichia coli ECRC98 0.32 JDDGAC_21665 dacB serine-type D-Ala-D-Ala carboxypeptidase 0.51 JDDGAC_02040 ydhF Oxidoreductase YdhF low > 87
Escherichia coli ECRC100 0.32 OKFHMN_18040 dacB serine-type D-Ala-D-Ala carboxypeptidase 0.51 OKFHMN_27450 ydhF Oxidoreductase YdhF low > 79
Escherichia coli ECRC99 0.32 KEDOAH_10110 dacB serine-type D-Ala-D-Ala carboxypeptidase 0.51 KEDOAH_00660 ydhF Oxidoreductase YdhF — —
Pantoea sp. MT58 0.32 IAI47_17085 serine-type D-Ala-D-Ala carboxypeptidase 0.56 IAI47_10750 aldo/keto reductase family oxidoreductase 0.24 65
Pantoea agglomerans CFBP13505 P0401 0.31 PagCFBP13505_RS09180 serine-type D-Ala-D-Ala carboxypeptidase 0.56 PagCFBP13505_RS05385 aldo/keto reductase family oxidoreductase low > 74
Rahnella sp. WP5 0.31 EX31_RS08600 serine-type D-Ala-D-Ala carboxypeptidase 0.59 EX31_RS13795 aldo/keto reductase family oxidoreductase low > 89
Serratia liquefaciens MT49 0.31 IAI46_01875 serine-type D-Ala-D-Ala carboxypeptidase 0.57 IAI46_11310 aldo/keto reductase family oxidoreductase low > 86
Dyella japonica UNC79MFTsu3.2 0.10 ABZR86_RS00485 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.47 ABZR86_RS20545 aldo/keto reductase family oxidoreductase low > 74
Sphingobium sp. HT1-2 0.08 GFF4681 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) 0.24 GFF2382 Oxidoreductase, aldo/keto reductase family low > 95
Paraburkholderia bryophila 376MFSha3.1 0.07 H281DRAFT_04181 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) 0.36 H281DRAFT_02535 Predicted oxidoreductase — —
Cellulophaga baltica 18 0.07 M666_RS10815 D-alanyl-D-alanine carboxypeptidase 0.29 M666_RS03940 aldo/keto reductase low > 67

Not shown: 27 genomes with orthologs for CSW01_03320 only; 21 genomes with orthologs for CSW01_18425 only