Conservation of cofitness between CSW01_04550 and CSW01_17040 in Vibrio cholerae E7946 ATCC 55056

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_04550 pseudouridine synthase 1.0 CSW01_17040 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit alpha 0.40 5
Pectobacterium carotovorum WPP14 0.37 HER17_RS16370 YqcC family protein 0.71 HER17_RS10510 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha low > 75
Serratia liquefaciens MT49 0.36 IAI46_20305 YqcC family protein 0.69 IAI46_13275 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha low > 86
Erwinia tracheiphila SCR3 0.35 LU632_RS06290 YqcC family protein 0.68 LU632_RS11435 pntA Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha low > 74
Erwinia tracheiphila HP pepo 2.2 0.35 IJEDHG_17315 tRNA pseudouridine synthase C 0.68 IJEDHG_23135 pntA Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha low > 61
Rahnella sp. WP5 0.35 EX31_RS13070 YqcC family protein 0.69 EX31_RS07215 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha low > 89
Enterobacter asburiae PDN3 0.32 EX28DRAFT_2873 Uncharacterized protein conserved in bacteria 0.74 EX28DRAFT_1544 NAD(P) transhydrogenase, alpha subunit low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.29 GFF4847 Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C) 0.75 GFF1796 NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) low > 78
Shewanella oneidensis MR-1 0.29 SO1619 conserved hypothetical protein (NCBI ptt file) 0.70 SO3740 pntA NAD(P) transhydrogenase, alpha subunit (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.29 Shewana3_2825 dTDP-4-dehydrorhamnose 3,5-epimerase (RefSeq) 0.68 Shewana3_0854 pntA NAD(P) transhydrogenase subunit alpha (RefSeq) low > 73
Escherichia coli HS(pFamp)R (ATCC 700891) 0.27 OHPLBJKB_00939 putative protein YqcC 0.76 OHPLBJKB_02123 NAD(P) transhydrogenase subunit alpha low > 74
Escherichia coli BL21 0.27 ECD_02637 DUF446 family protein 0.76 ECD_01572 pyridine nucleotide transhydrogenase, alpha subunit low > 61
Escherichia coli ECOR38 0.27 HEPCGN_19460 tRNA pseudouridine synthase C 0.76 HEPCGN_06065 pntA Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha low > 88
Escherichia coli ECRC98 0.26 JDDGAC_23870 tRNA pseudouridine synthase C 0.77 JDDGAC_02280 pntA Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha low > 87
Escherichia coli ECRC102 0.26 NIAGMN_17975 tRNA pseudouridine synthase C 0.77 NIAGMN_00385 pntA Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha low > 80
Escherichia coli ECRC101 0.26 MCAODC_10730 tRNA pseudouridine synthase C 0.77 MCAODC_17720 pntA Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha low > 88
Escherichia coli ECRC100 0.26 OKFHMN_20205 tRNA pseudouridine synthase C 0.77 OKFHMN_27690 pntA Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha low > 79
Escherichia coli ECRC99 0.26 KEDOAH_07925 tRNA pseudouridine synthase C 0.77 KEDOAH_00415 pntA Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha — —
Escherichia fergusonii Becca 0.26 EFB2_01125 putative protein YqcC 0.76 EFB2_02389 NAD(P) transhydrogenase subunit alpha low > 86
Escherichia coli Nissle 1917 0.26 ECOLIN_RS15555 YqcC family protein 0.76 ECOLIN_RS08955 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha — —
Escherichia coli ECOR27 0.25 NOLOHH_12085 yqcC Uncharacterized protein YqcC 0.76 NOLOHH_18195 pntA Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha low > 76
Escherichia coli BW25113 0.25 b2792 yqcC hypothetical protein (NCBI) 0.76 b1603 pntA NAD(P) transhydrogenase subunit alpha (NCBI) low > 76
Escherichia coli ECRC62 0.25 BNILDI_10590 yqcC Uncharacterized protein YqcC 0.77 BNILDI_16985 pntA Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha low > 75

Not shown: 7 genomes with orthologs for CSW01_04550 only; 16 genomes with orthologs for CSW01_17040 only