Conservation of cofitness between CSW01_03485 and CSW01_16905 in Vibrio cholerae E7946 ATCC 55056

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03485 branched-chain amino acid transport system II carrier protein 1.0 CSW01_16905 DedA family protein 0.43 2
Shewanella oneidensis MR-1 0.44 SO0949 brnQ branched-chain amino acid transport system II carrier protein BrnQ (NCBI ptt file) 0.22 SO1720 DedA family protein (NCBI ptt file) low > 76
Dickeya dadantii 3937 0.38 DDA3937_RS05445 branched-chain amino acid transport system II carrier protein 0.23 DDA3937_RS02810 DedA family protein low > 74
Dickeya dianthicola ME23 0.38 DZA65_RS05830 branched-chain amino acid transport system II carrier protein 0.23 DZA65_RS02940 DedA family protein low > 75
Pseudomonas sp. S08-1 0.38 OH686_01945 branched-chain amino acid transport system II carrier protein 0.14 OH686_14535 DedA protein low > 80
Dickeya dianthicola 67-19 0.38 HGI48_RS05505 branched-chain amino acid transport system II carrier protein 0.23 HGI48_RS02785 DedA family protein low > 71
Escherichia fergusonii Becca 0.38 EFB2_03656 Branched-chain amino acid transport system 2 carrier protein 0.25 EFB2_00801 Inner membrane protein YghB low > 86
Escherichia coli Nissle 1917 0.38 ECOLIN_RS02420 branched-chain amino acid transporter carrier protein BrnQ 0.25 ECOLIN_RS17320 DedA family general envelope maintenance protein YghB low > 55
Escherichia coli ECOR38 0.38 HEPCGN_07175 brnQ branched-chain amino acid transporter carrier protein BrnQ 0.25 HEPCGN_17820 yghB Inner membrane protein YghB low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.38 OHPLBJKB_03275 Branched-chain amino acid transport system 2 carrier protein 0.25 OHPLBJKB_00692 Inner membrane protein YghB low > 73
Escherichia coli BW25113 0.38 b0401 brnQ predicted branched chain amino acid transporter (LIV-II) (NCBI) 0.25 b3009 yghB conserved inner membrane protein (NCBI) low > 76
Escherichia coli ECRC101 0.38 MCAODC_27760 brnQ branched-chain amino acid transporter carrier protein BrnQ 0.25 MCAODC_09470 yghB Inner membrane protein YghB low > 87
Escherichia coli ECRC98 0.38 JDDGAC_12190 brnQ branched-chain amino acid transporter carrier protein BrnQ 0.25 JDDGAC_22590 yghB Inner membrane protein YghB low > 86
Escherichia coli ECRC62 0.38 BNILDI_22880 brnQ branched-chain amino acid transporter carrier protein BrnQ 0.25 BNILDI_00785 yghB Inner membrane protein YghB low > 75
Escherichia coli ECRC99 0.38 KEDOAH_19430 brnQ branched-chain amino acid transporter carrier protein BrnQ 0.25 KEDOAH_09190 yghB Inner membrane protein YghB — —
Escherichia coli ECRC100 0.38 OKFHMN_08535 brnQ branched-chain amino acid transporter carrier protein BrnQ 0.25 OKFHMN_18955 yghB Inner membrane protein YghB low > 80
Escherichia coli ECOR27 0.38 NOLOHH_01465 brnQ branched-chain amino acid transporter carrier protein BrnQ 0.25 NOLOHH_10730 yghB Inner membrane protein YghB low > 75
Escherichia coli ECRC102 0.38 NIAGMN_06590 brnQ branched-chain amino acid transporter carrier protein BrnQ 0.25 NIAGMN_16720 yghB Inner membrane protein YghB — —
Escherichia coli BL21 0.38 ECD_00349 branched-chain amino acid transport system 2 carrier protein; LIV-II transport system for Ile, Leu, and Val 0.25 ECD_02882 general envelope maintenance protein; DedA family inner membrane protein; putative multidrug efflux transporter low > 61
Klebsiella michiganensis M5al 0.37 BWI76_RS06240 branched-chain amino acid transport system 2 carrier protein BrnQ 0.24 BWI76_RS24745 membrane protein low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.37 GFF4299 Branched-chain amino acid transport system carrier protein 0.24 GFF3192 DedA family inner membrane protein YqjA low > 78
Enterobacter sp. TBS_079 0.37 MPMX20_00988 Branched-chain amino acid transport system 2 carrier protein 0.25 MPMX20_03853 Inner membrane protein YghB low > 85
Enterobacter asburiae PDN3 0.37 EX28DRAFT_2573 branched-chain amino acid uptake carrier 0.25 EX28DRAFT_3163 Uncharacterized membrane-associated protein low > 76
Pectobacterium carotovorum WPP14 0.37 HER17_RS16020 branched-chain amino acid transport system II carrier protein 0.24 HER17_RS18730 DedA family protein low > 75
Serratia liquefaciens MT49 0.36 IAI46_04795 branched-chain amino acid transport system II carrier protein 0.25 IAI46_21730 DedA family protein low > 86
Pantoea sp. MT58 0.36 IAI47_14835 branched-chain amino acid transporter carrier protein BrnQ 0.26 IAI47_03210 DedA family protein low > 76
Erwinia tracheiphila SCR3 0.35 LU632_RS18890 brnQ branched-chain amino acid transport system II carrier protein 0.24 LU632_RS20550 DedA family protein low > 74
Erwinia amylovora T8 0.35 OLJFJH_18165 branched-chain amino acid transporter carrier protein BrnQ 0.24 OLJFJH_07815 DedA family protein low > 58
Rahnella sp. WP5 0.34 EX31_RS22065 branched-chain amino acid transport system II carrier protein 0.26 EX31_RS08030 DedA family protein low > 89
Acinetobacter radioresistens SK82 0.33 MPMX26_01263 Branched-chain amino acid transport system 2 carrier protein 0.17 MPMX26_00073 Protein DedA low > 36

Not shown: 23 genomes with orthologs for CSW01_03485 only; 13 genomes with orthologs for CSW01_16905 only