Conservation of cofitness between CSW01_03920 and CSW01_16835 in Vibrio cholerae E7946 ATCC 55056

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03920 peptidase B 1.0 CSW01_16835 catabolite repressor/activator 0.88 19
Erwinia amylovora T8 0.63 OLJFJH_10370 aminopeptidase PepB 0.40 OLJFJH_01270 catabolite repressor/activator low > 58
Serratia liquefaciens MT49 0.63 IAI46_19320 aminopeptidase PepB 0.42 IAI46_03385 catabolite repressor/activator 0.36 78
Escherichia coli ECRC102 0.62 NIAGMN_19425 pepB aminopeptidase PepB 0.41 NIAGMN_08535 cra catabolite repressor/activator low > 80
Escherichia coli ECRC62 0.62 BNILDI_12125 pepB aminopeptidase PepB 0.41 BNILDI_08580 cra catabolite repressor/activator low > 75
Escherichia coli ECRC99 0.62 KEDOAH_06565 pepB aminopeptidase PepB 0.41 KEDOAH_17470 cra catabolite repressor/activator — —
Escherichia coli ECRC98 0.62 JDDGAC_25330 pepB aminopeptidase PepB 0.41 JDDGAC_14280 cra catabolite repressor/activator low > 87
Escherichia coli ECRC100 0.62 OKFHMN_21655 pepB aminopeptidase PepB 0.41 OKFHMN_10685 cra catabolite repressor/activator low > 79
Escherichia coli ECRC101 0.62 MCAODC_12185 pepB aminopeptidase PepB 0.41 MCAODC_01200 cra catabolite repressor/activator low > 88
Escherichia coli ECOR27 0.62 NOLOHH_13325 pepB aminopeptidase PepB 0.41 NOLOHH_03030 cra catabolite repressor/activator low > 76
Escherichia coli BL21 0.62 ECD_02415 aminopeptidase B 0.42 ECD_00081 transcriptional repressor-activator for carbon metabolism low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.62 OHPLBJKB_01186 Peptidase B 0.42 OHPLBJKB_03579 Catabolite repressor/activator low > 74
Dickeya dadantii 3937 0.62 DDA3937_RS15510 aminopeptidase PepB 0.42 DDA3937_RS18095 catabolite repressor/activator low > 74
Erwinia tracheiphila HP pepo 2.2 0.61 IJEDHG_02865 pepB aminopeptidase PepB 0.43 IJEDHG_05975 cra catabolite repressor/activator low > 61
Erwinia tracheiphila SCR3 0.61 LU632_RS17865 pepB aminopeptidase PepB 0.43 LU632_RS02900 cra catabolite repressor/activator low > 74
Escherichia coli BW25113 0.61 b2523 pepB putative peptidase (VIMSS) 0.42 b0080 fruR DNA-binding transcriptional dual regulator (NCBI) low > 76
Escherichia coli Nissle 1917 0.61 ECOLIN_RS14330 aminopeptidase PepB 0.42 ECOLIN_RS00430 catabolite repressor/activator low > 55
Escherichia fergusonii Becca 0.61 EFB2_01367 Peptidase B 0.42 EFB2_03967 Catabolite repressor/activator low > 86
Klebsiella pneumoniae MKP103 0.61 KDGMDA_28250 aminopeptidase PepB 0.41 KDGMDA_12935 catabolite repressor/activator low > 95
Klebsiella michiganensis M5al 0.61 BWI76_RS21125 aminopeptidase PepB 0.42 BWI76_RS04705 DNA-binding transcriptional regulator FruR low > 92
Dickeya dianthicola 67-19 0.61 HGI48_RS15610 aminopeptidase PepB 0.42 HGI48_RS18030 catabolite repressor/activator low > 71
Pantoea agglomerans CFBP13505 P0401 0.60 PagCFBP13505_RS14900 aminopeptidase PepB 0.41 PagCFBP13505_RS13020 catabolite repressor/activator low > 74
Pantoea sp. MT58 0.60 IAI47_05010 aminopeptidase PepB 0.41 IAI47_15980 catabolite repressor/activator low > 76
Dickeya dianthicola ME23 0.60 DZA65_RS16685 aminopeptidase PepB 0.42 DZA65_RS19175 catabolite repressor/activator low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.60 GFF2428 Peptidase B (EC 3.4.11.23) 0.41 GFF158 Fructose repressor FruR, LacI family low > 78
Escherichia coli ECOR38 0.60 HEPCGN_20795 pepB aminopeptidase PepB 0.41 HEPCGN_08665 cra catabolite repressor/activator low > 88
Enterobacter asburiae PDN3 0.60 EX28DRAFT_0117 Leucyl aminopeptidase 0.42 EX28DRAFT_3675 transcriptional regulator, LacI family low > 76
Enterobacter sp. TBS_079 0.60 MPMX20_03404 Peptidase B 0.42 MPMX20_00773 Catabolite repressor/activator low > 85
Rahnella sp. WP5 0.59 EX31_RS20540 aminopeptidase PepB 0.42 EX31_RS03655 catabolite repressor/activator low > 89
Pectobacterium carotovorum WPP14 0.58 HER17_RS06050 aminopeptidase PepB 0.41 HER17_RS03105 catabolite repressor/activator 0.81 34

Not shown: 7 genomes with orthologs for CSW01_03920 only; 19 genomes with orthologs for CSW01_16835 only