Conservation of cofitness between CSW01_18425 and CSW01_15345 in Vibrio cholerae E7946 ATCC 55056

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_18425 oxidoreductase 1.0 CSW01_15345 XRE family transcriptional regulator 0.56 16
Enterobacter asburiae PDN3 0.61 EX28DRAFT_1644 Predicted oxidoreductase 0.15 EX28DRAFT_1500 Predicted transcriptional regulators low > 76
Shewanella sp. ANA-3 0.59 Shewana3_0559 aldo/keto reductase (RefSeq) 0.14 Shewana3_3100 XRE family transcriptional regulator (RefSeq) low > 73
Escherichia coli ECRC62 0.58 BNILDI_16760 ydhF Oxidoreductase YdhF 0.14 BNILDI_18270 puuR HTH-type transcriptional regulator PuuR low > 75
Klebsiella pneumoniae MKP103 0.58 KDGMDA_23405 oxidoreductase 0.14 KDGMDA_18340 HTH-type transcriptional regulator PuuR low > 95
Escherichia coli BW25113 0.57 b1647 ydhF predicted oxidoreductase (NCBI) 0.14 b1299 puuR DNA-binding transcriptional repressor (NCBI) low > 76
Escherichia coli BL21 0.57 ECD_01617 putative oxidoreductase 0.14 ECD_01276 repressor for the divergent puu operons, putrescine inducible — —
Escherichia coli ECOR38 0.57 HEPCGN_05835 ydhF Oxidoreductase YdhF 0.14 HEPCGN_25765 puuR HTH-type transcriptional regulator PuuR low > 88
Escherichia coli ECOR27 0.57 NOLOHH_17970 ydhF Oxidoreductase YdhF 0.14 NOLOHH_20120 puuR HTH-type transcriptional regulator PuuR low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_02078 Oxidoreductase YdhF 0.14 OHPLBJKB_02383 HTH-type transcriptional regulator PuuR low > 74
Klebsiella michiganensis M5al 0.55 BWI76_RS16460 oxidoreductase 0.14 BWI76_RS10700 XRE family transcriptional regulator 0.15 40
Escherichia coli ECRC100 0.51 OKFHMN_27450 ydhF Oxidoreductase YdhF 0.14 OKFHMN_02435 puuR HTH-type transcriptional regulator PuuR low > 79
Escherichia coli ECRC98 0.51 JDDGAC_02040 ydhF Oxidoreductase YdhF 0.14 JDDGAC_04980 puuR HTH-type transcriptional regulator PuuR low > 87
Escherichia coli ECRC102 0.51 NIAGMN_00615 ydhF Oxidoreductase YdhF 0.14 NIAGMN_26605 puuR HTH-type transcriptional regulator PuuR low > 80
Escherichia coli ECRC101 0.51 MCAODC_17960 ydhF Oxidoreductase YdhF 0.14 MCAODC_15835 puuR HTH-type transcriptional regulator PuuR low > 87
Escherichia coli ECRC99 0.51 KEDOAH_00660 ydhF Oxidoreductase YdhF 0.14 KEDOAH_26340 puuR HTH-type transcriptional regulator PuuR — —
Paraburkholderia bryophila 376MFSha3.1 0.36 H281DRAFT_02535 Predicted oxidoreductase 0.44 H281DRAFT_03868 transcriptional regulator, XRE family with cupin sensor — —
Dinoroseobacter shibae DFL-12 0.32 Dshi_2756 aldo/keto reductase (RefSeq) 0.59 Dshi_1555 transcriptional regulator, XRE family (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.31 PGA1_c13100 aldo / keto reductase 0.55 PGA1_c14960 putative transcriptional regulator low > 62
Pseudomonas fluorescens FW300-N2E2 0.22 Pf6N2E2_1902 Oxidoreductase, aldo/keto reductase family 0.18 Pf6N2E2_3201 Transcriptional regulator, MerR family low > 103
Pseudomonas fluorescens FW300-N2C3 0.22 AO356_30200 aldo/keto reductase 0.18 AO356_06745 DNA-binding protein low > 104
Paraburkholderia graminis OAS925 0.15 ABIE53_003330 diketogulonate reductase-like aldo/keto reductase 0.45 ABIE53_004924 transcriptional regulator with XRE-family HTH domain low > 113
Paraburkholderia sabiae LMG 24235 0.14 QEN71_RS02915 aldo/keto reductase 0.45 QEN71_RS14815 XRE family transcriptional regulator low > 153
Burkholderia phytofirmans PsJN 0.14 BPHYT_RS15795 hypothetical protein 0.45 BPHYT_RS33425 transcriptional regulator low > 109
Ralstonia solanacearum UW163 0.10 UW163_RS12405 2,5-didehydrogluconate reductase DkgB 0.30 UW163_RS16950 XRE family transcriptional regulator — —
Ralstonia solanacearum IBSBF1503 0.10 RALBFv3_RS14935 2,5-didehydrogluconate reductase DkgB 0.30 RALBFv3_RS16215 XRE family transcriptional regulator low > 76
Castellaniella sp019104865 MT123 0.10 ABCV34_RS12210 aldo/keto reductase 0.38 ABCV34_RS09100 XRE family transcriptional regulator low > 48

Not shown: 25 genomes with orthologs for CSW01_18425 only; 34 genomes with orthologs for CSW01_15345 only