Conservation of cofitness between CSW01_10815 and CSW01_14815 in Vibrio cholerae E7946 ATCC 55056

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10815 Cys-tRNA(Pro) deacylase 1.0 CSW01_14815 hypothetical protein 0.62 1
Pectobacterium carotovorum WPP14 0.57 HER17_RS15635 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.65 HER17_RS04050 DUF3820 family protein low > 75
Escherichia coli Nissle 1917 0.56 ECOLIN_RS02850 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.57 ECOLIN_RS13850 DUF3820 family protein — —
Escherichia fergusonii Becca 0.56 EFB2_03577 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.59 EFB2_01466 hypothetical protein low > 86
Rahnella sp. WP5 0.55 EX31_RS22565 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.63 EX31_RS20155 DUF3820 family protein low > 89
Escherichia coli HS(pFamp)R (ATCC 700891) 0.55 OHPLBJKB_03193 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.58 OHPLBJKB_01313 hypothetical protein low > 74
Escherichia coli BW25113 0.55 b0481 ybaK hypothetical protein (NCBI) 0.58 b4546 ypeB hypothetical protein (NCBI) low > 76
Escherichia coli ECOR27 0.55 NOLOHH_01035 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.58 NOLOHH_13900 ypeB Uncharacterized protein YpeB low > 76
Escherichia coli ECOR38 0.55 HEPCGN_06725 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.58 HEPCGN_21400 Putative quorum-sensing-regulated virulence factor low > 88
Escherichia coli BL21 0.55 ECD_00432 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase 0.58 ECD_02310 DUF3820 family protein low > 61
Pantoea agglomerans CFBP13505 P0401 0.55 PagCFBP13505_RS10790 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.63 PagCFBP13505_RS20005 hypothetical protein low > 74
Escherichia coli ECRC62 0.55 BNILDI_22455 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.58 BNILDI_12765 ypeB Uncharacterized protein YpeB low > 75
Serratia liquefaciens MT49 0.55 IAI46_05300 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.68 IAI46_18425 DUF3820 family protein low > 87
Pseudomonas stutzeri RCH2 0.55 Psest_1454 ybaK/ebsC protein 0.47 Psest_1458 Uncharacterized protein conserved in bacteria low > 67
Escherichia coli ECRC100 0.55 OKFHMN_08105 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.58 OKFHMN_22220 ypeB Uncharacterized protein YpeB low > 79
Escherichia coli ECRC101 0.55 MCAODC_27325 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.58 MCAODC_12750 ypeB Uncharacterized protein YpeB low > 87
Escherichia coli ECRC99 0.55 KEDOAH_19865 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.58 KEDOAH_06000 ypeB Uncharacterized protein YpeB — —
Escherichia coli ECRC98 0.55 JDDGAC_11750 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.58 JDDGAC_26170 ypeB Uncharacterized protein YpeB low > 87
Escherichia coli ECRC102 0.55 NIAGMN_06155 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.58 NIAGMN_19990 ypeB Uncharacterized protein YpeB low > 80
Pantoea sp. MT58 0.54 IAI47_14410 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.63 IAI47_05460 DUF3820 family protein low > 76
Erwinia amylovora T8 0.54 OLJFJH_17720 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.64 OLJFJH_10885 cytoplasmic protein low > 58
Enterobacter sp. TBS_079 0.54 MPMX20_01082 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.61 MPMX20_03304 hypothetical protein low > 85
Klebsiella pneumoniae MKP103 0.54 KDGMDA_14930 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.59 KDGMDA_27465 Putative quorum-sensing-regulated virulence factor low > 95
Klebsiella michiganensis M5al 0.54 BWI76_RS06870 aminoacyl-tRNA deacylase 0.59 BWI76_RS20620 negative regulator — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.53 GFF4401 Cys-tRNA(Pro) deacylase YbaK 0.58 GFF2040 FIG074102: hypothetical protein low > 78
Enterobacter asburiae PDN3 0.53 EX28DRAFT_2477 Cys-tRNA(Pro) deacylase 0.57 EX28DRAFT_0218 Uncharacterized protein conserved in bacteria low > 76
Pseudomonas sp. BP01 0.53 JOY50_RS14880 ybaK Cys-tRNA(Pro) deacylase 0.50 JOY50_RS19300 DUF3820 family protein — —
Pseudomonas aeruginosa PA14 0.52 IKLFDK_18280 Cys-tRNA(Pro) deacylase 0.68 IKLFDK_18440 Putative quorum-sensing-regulated virulence factor low > 98
Pseudomonas aeruginosa MRSN321 0.52 DY961_RS15090 ybaK;go_function=aminoacyl-tRNA Cys-tRNA(Pro) deacylase 0.68 DY961_RS14920 DUF3820 family protein low > 100
Pseudomonas aeruginosa PUPa3 0.52 DQ20_RS42050 ybaK;go_function=aminoacyl-tRNA Cys-tRNA(Pro) deacylase 0.68 DQ20_RS42210 DUF3820 family protein low > 101
Pseudomonas sp. S08-1 0.52 OH686_20370 Cys-tRNA(Pro) deacylase YbaK 0.49 OH686_18670 Uncharacterized protein YpeB low > 80
Pseudomonas sp. SVBP6 0.51 COO64_RS16810 ybaK Cys-tRNA(Pro) deacylase 0.49 COO64_RS11290 DUF3820 family protein low > 93
Shewanella sp. ANA-3 0.50 Shewana3_0957 ybaK/ebsC protein (RefSeq) 0.56 Shewana3_1217 hypothetical protein (RefSeq) low > 73
Dickeya dadantii 3937 0.50 DDA3937_RS05835 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.63 DDA3937_RS17090 DUF3820 family protein low > 74
Shewanella oneidensis MR-1 0.50 SO1124 conserved hypothetical protein TIGR00011 (NCBI ptt file) 0.57 SO3326 conserved hypothetical protein (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.49 MIT1002_01641 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.57 MIT1002_01393 hypothetical protein low > 70
Pseudomonas segetis P6 0.45 MPMX49_01431 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.48 MPMX49_02297 hypothetical protein low > 75
Dickeya dianthicola ME23 0.43 DZA65_RS06215 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.61 DZA65_RS18225 hypothetical protein low > 75
Dickeya dianthicola 67-19 0.43 HGI48_RS05880 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK 0.61 HGI48_RS17140 DUF3820 family protein low > 71
Shewanella loihica PV-4 0.42 Shew_0016 ybaK/ebsC protein (RefSeq) 0.55 Shew_1282 hypothetical protein (RefSeq) — —
Dechlorosoma suillum PS 0.27 Dsui_1216 ybaK/ebsC protein 0.46 Dsui_0949 hypothetical protein low > 51
Variovorax sp. OAS795 0.26 ABID97_RS21705 aminoacyl-tRNA deacylase 0.49 ABID97_RS04120 DUF3820 family protein low > 91
Acidovorax sp. GW101-3H11 0.26 Ac3H11_2624 Transcriptional regulator 0.49 Ac3H11_1029 Putative cytoplasmic protein low > 79
Ralstonia solanacearum GMI1000 0.25 RS_RS12760 Cys-tRNA(Pro) deacylase 0.48 RS_RS16700 hypothetical protein low > 80
Burkholderia phytofirmans PsJN 0.25 BPHYT_RS15940 membrane protein 0.51 BPHYT_RS08730 hypothetical protein low > 109
Ralstonia solanacearum UW163 0.25 UW163_RS08480 Cys-tRNA(Pro) deacylase 0.48 UW163_RS04725 hypothetical protein — —
Ralstonia solanacearum IBSBF1503 0.25 RALBFv3_RS05145 Cys-tRNA(Pro) deacylase 0.48 RALBFv3_RS08885 hypothetical protein low > 76
Paraburkholderia bryophila 376MFSha3.1 0.25 H281DRAFT_04124 Cys-tRNA(Pro) deacylase 0.50 H281DRAFT_00769 hypothetical protein low > 103
Ralstonia solanacearum PSI07 0.25 RPSI07_RS12155 Cys-tRNA(Pro) deacylase 0.47 RPSI07_RS08385 hypothetical protein low > 81
Cupriavidus basilensis FW507-4G11 0.24 RR42_RS03340 membrane protein 0.47 RR42_RS27745 hypothetical protein low > 128
Ralstonia sp. UNC404CL21Col 0.24 ABZR87_RS00800 Cys-tRNA(Pro) deacylase 0.49 ABZR87_RS04155 DUF3820 family protein low > 80
Paraburkholderia sabiae LMG 24235 0.24 QEN71_RS02765 Cys-tRNA(Pro) deacylase 0.48 QEN71_RS22640 DUF3820 family protein low > 153
Variovorax sp. SCN45 0.24 GFF3103 Cys-tRNA(Pro) deacylase YbaK 0.50 GFF5018 Uncharacterized protein YpeB low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.23 GFF288 Transcriptional regulator 0.50 GFF4965 Putative cytoplasmic protein — —

Not shown: 44 genomes with orthologs for CSW01_10815 only; 9 genomes with orthologs for CSW01_14815 only