Conservation of cofitness between CSW01_10520 and CSW01_14125 in Vibrio cholerae E7946 ATCC 55056

75 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10520 Aspartate-semialdehyde dehydrogenase 2 1.0 CSW01_14125 1,4-alpha-glucan branching enzyme 0.62 3
Shewanella amazonensis SB2B 0.72 Sama_2152 aspartate-semialdehyde dehydrogenase (RefSeq) 0.43 Sama_2453 1,4-alpha-glucan branching enzyme (RefSeq)
Shewanella loihica PV-4 0.71 Shew_2308 aspartate-semialdehyde dehydrogenase (RefSeq) 0.43 Shew_1168 glycogen branching enzyme (RefSeq)
Shewanella sp. ANA-3 0.71 Shewana3_1477 aspartate semialdehyde dehydrogenase (RefSeq) 0.42 Shewana3_2934 glycogen branching enzyme (RefSeq)
Shewanella oneidensis MR-1 0.71 SO3070 asd aspartate semialdehyde dehydrogenese (NCBI ptt file) 0.43 SO1494 glgB 1,4-alpha-glucan branching enzyme (NCBI ptt file)
Alteromonas macleodii MIT1002 0.67 MIT1002_02531 Aspartate-semialdehyde dehydrogenase 2 0.53 MIT1002_02399 1,4-alpha-glucan branching enzyme GlgB
Xanthomonas campestris pv. campestris strain 8004 0.56 Xcc-8004.1957.1 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 0.45 Xcc-8004.186.1 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)
Agrobacterium fabrum C58 0.50 Atu2490 aspartate-semialdehyde dehydrogenase 0.43 Atu4077 glycogen branching protein
Rhodospirillum rubrum S1H 0.50 Rru_A1196 Aspartate-semialdehyde dehydrogenase, USG-1 related (NCBI) 0.45 Rru_A2576 1,4-alpha-glucan branching enzyme (NCBI)
Magnetospirillum magneticum AMB-1 0.49 AMB_RS03035 aspartate-semialdehyde dehydrogenase 0.44 AMB_RS15430 1,4-alpha-glucan branching protein GlgB
Rhizobium sp. OAE497 0.49 ABIE40_RS19095 aspartate-semialdehyde dehydrogenase 0.45 ABIE40_RS30590 1,4-alpha-glucan branching protein GlgB
Rahnella sp. WP5 0.49 EX31_RS19605 aspartate-semialdehyde dehydrogenase 0.45 EX31_RS05025 1,4-alpha-glucan branching enzyme low > 89
Desulfovibrio vulgaris Miyazaki F 0.49 DvMF_2382 aspartate-semialdehyde dehydrogenase (RefSeq) 0.39 DvMF_0840 glycogen branching enzyme (RefSeq)
Serratia liquefaciens MT49 0.48 IAI46_17845 aspartate-semialdehyde dehydrogenase 0.44 IAI46_23940 1,4-alpha-glucan branching protein GlgB low > 87
Desulfovibrio vulgaris Hildenborough JW710 0.48 DVU3048 asd aspartate-semialdehyde dehydrogenase (TIGR) 0.39 DVU2243 glgB 1,4-alpha-glucan branching enzyme (TIGR)
Sinorhizobium meliloti 1021 0.48 SMc04410 aspartate-semialdehyde dehydrogenase 0.43 SMc03922 glycogen branching protein
Dickeya dadantii 3937 0.47 DDA3937_RS14470 aspartate-semialdehyde dehydrogenase 0.43 DDA3937_RS19745 1,4-alpha-glucan branching protein GlgB low > 74
Azospirillum sp. SherDot2 0.47 MPMX19_02000 Aspartate-semialdehyde dehydrogenase 2 0.46 MPMX19_03849 1,4-alpha-glucan branching enzyme GlgB
Bosea sp. OAE506 0.47 ABIE41_RS08445 aspartate-semialdehyde dehydrogenase 0.44 ABIE41_RS01220 1,4-alpha-glucan branching protein GlgB
Sphingobium sp. HT1-2 0.47 GFF4966 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 0.41 GFF2036 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)
Xanthobacter sp. DMC5 0.47 GFF2437 Aspartate-semialdehyde dehydrogenase 2 0.44 GFF1455 1,4-alpha-glucan branching enzyme GlgB
Dickeya dianthicola ME23 0.47 DZA65_RS15375 aspartate-semialdehyde dehydrogenase 0.44 DZA65_RS20930 1,4-alpha-glucan branching protein GlgB low > 75
Dickeya dianthicola 67-19 0.46 HGI48_RS14440 aspartate-semialdehyde dehydrogenase 0.44 HGI48_RS19855 1,4-alpha-glucan branching protein GlgB
Rhodopseudomonas palustris CGA009 0.46 TX73_001190 aspartate-semialdehyde dehydrogenase 0.44 TX73_018885 1,4-alpha-glucan branching protein GlgB
Pectobacterium carotovorum WPP14 0.46 HER17_RS06985 aspartate-semialdehyde dehydrogenase 0.44 HER17_RS01485 1,4-alpha-glucan branching enzyme low > 75
Escherichia coli ECOR27 0.45 NOLOHH_14300 usg aspartate-semialdehyde dehydrogenase 0.44 NOLOHH_08675 glgB 1,4-alpha-glucan branching enzyme low > 76
Escherichia coli ECRC62 0.45 BNILDI_13220 usg aspartate-semialdehyde dehydrogenase 0.44 BNILDI_02840 glgB 1,4-alpha-glucan branching enzyme low > 75
Escherichia coli ECOR38 0.45 HEPCGN_21870 usg aspartate-semialdehyde dehydrogenase 0.44 HEPCGN_15700 glgB 1,4-alpha-glucan branching enzyme low > 88
Escherichia fergusonii Becca 0.45 EFB2_01539 USG-1 protein 0.45 EFB2_00387 1,4-alpha-glucan branching enzyme GlgB low > 86
Escherichia coli Nissle 1917 0.45 ECOLIN_RS13440 aspartate-semialdehyde dehydrogenase 0.45 ECOLIN_RS19640 1,4-alpha-glucan branching enzyme low > 55
Escherichia coli BL21 0.45 ECD_02244 putative semialdehyde dehydrogenase 0.44 ECD_03284 1,4-alpha-glucan branching enzyme low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.45 OHPLBJKB_01386 USG-1 protein 0.44 OHPLBJKB_00269 1,4-alpha-glucan branching enzyme GlgB low > 74
Escherichia coli ECRC99 0.45 KEDOAH_05530 usg aspartate-semialdehyde dehydrogenase 0.44 KEDOAH_11255 glgB 1,4-alpha-glucan branching enzyme
Escherichia coli BW25113 0.45 b2319 usg hypothetical protein (NCBI) 0.44 b3432 glgB glycogen branching enzyme (NCBI) low > 76
Escherichia coli ECRC102 0.45 NIAGMN_20440 usg aspartate-semialdehyde dehydrogenase 0.44 NIAGMN_14655 glgB 1,4-alpha-glucan branching enzyme low > 80
Escherichia coli ECRC98 0.45 JDDGAC_26625 usg aspartate-semialdehyde dehydrogenase 0.44 JDDGAC_20515 glgB 1,4-alpha-glucan branching enzyme
Escherichia coli ECRC101 0.45 MCAODC_13705 usg aspartate-semialdehyde dehydrogenase 0.44 MCAODC_07415 glgB 1,4-alpha-glucan branching enzyme low > 87
Escherichia coli ECRC100 0.45 OKFHMN_22665 usg aspartate-semialdehyde dehydrogenase 0.44 OKFHMN_16885 glgB 1,4-alpha-glucan branching enzyme low > 79
Erwinia amylovora T8 0.45 OLJFJH_11235 aspartate-semialdehyde dehydrogenase 0.44 OLJFJH_04260 1 4-alpha-glucan branching enzyme low > 58
Klebsiella pneumoniae MKP103 0.44 KDGMDA_27220 aspartate-semialdehyde dehydrogenase 0.44 KDGMDA_07100 1 4-alpha-glucan branching enzyme low > 95
Enterobacter sp. TBS_079 0.44 MPMX20_03254 USG-1 protein 0.44 MPMX20_04314 1,4-alpha-glucan branching enzyme GlgB low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.44 GFF1935 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 0.44 GFF575 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) low > 78
Pantoea agglomerans CFBP13505 P0401 0.44 PagCFBP13505_RS00195 aspartate-semialdehyde dehydrogenase 0.43 PagCFBP13505_RS18195 1,4-alpha-glucan branching enzyme low > 74
Klebsiella michiganensis M5al 0.44 BWI76_RS20385 aspartate-semialdehyde dehydrogenase 0.44 BWI76_RS26215 glycogen-branching enzyme low > 92
Pantoea sp. MT58 0.43 IAI47_06240 aspartate-semialdehyde dehydrogenase 0.44 IAI47_01680 1,4-alpha-glucan branching enzyme low > 76
Enterobacter asburiae PDN3 0.42 EX28DRAFT_0285 Aspartate-semialdehyde dehydrogenase 0.44 EX28DRAFT_4115 alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase low > 76
Synechococcus elongatus PCC 7942 0.42 Synpcc7942_1848 asd aspartate-semialdehyde dehydrogenase 0.43 Synpcc7942_1085 glgB glycogen branching enzyme
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_68 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 0.46 Pf6N2E2_2117 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) low > 103
Pedobacter sp. GW460-11-11-14-LB5 0.41 CA265_RS15395 aspartate-semialdehyde dehydrogenase 0.36 CA265_RS02145 1,4-alpha-glucan branching enzyme
Synechocystis sp000284455 PCC 6803 0.41 SGL_RS16920 aspartate-semialdehyde dehydrogenase 0.41 SGL_RS12820 1,4-alpha-glucan branching enzyme
Pseudomonas sp. RS175 0.41 PFR28_02819 USG-1 protein 0.47 PFR28_01319 1,4-alpha-glucan branching enzyme GlgB low > 88
Mucilaginibacter yixingensis YX-36 DSM 26809 0.41 ABZR88_RS18675 aspartate-semialdehyde dehydrogenase 0.39 ABZR88_RS12490 1,4-alpha-glucan branching protein GlgB
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_21425 aspartate-semialdehyde dehydrogenase 0.46 AO356_01245 glycogen branching protein low > 104
Pseudomonas fluorescens GW456-L13 0.40 PfGW456L13_3943 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 0.44 PfGW456L13_3253 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) low > 87
Cellulophaga baltica 18 0.39 M666_RS04365 aspartate-semialdehyde dehydrogenase 0.39 M666_RS11360 1,4-alpha-glucan branching protein GlgB
Pseudomonas sp. DMC3 0.39 GFF790 USG-1 protein 0.45 GFF3495 1,4-alpha-glucan branching enzyme GlgB low > 89
Pseudomonas sp. SVBP6 0.38 COO64_RS05640 aspartate-semialdehyde dehydrogenase 0.46 COO64_RS24775 glgB 1,4-alpha-glucan branching protein GlgB low > 93
Pseudomonas fluorescens FW300-N1B4 0.38 Pf1N1B4_10 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 0.45 Pf1N1B4_4678 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) low > 87
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_1660 Aspartate-semialdehyde dehydrogenase 0.46 Psyr_2491 glycogen branching enzyme low > 86
Pseudomonas fluorescens FW300-N2E3 0.38 AO353_20645 aspartate-semialdehyde dehydrogenase 0.44 AO353_22945 glycogen branching protein low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_1660 Aspartate-semialdehyde dehydrogenase 0.46 Psyr_2491 glycogen branching enzyme low > 86
Azospirillum brasilense Sp245 0.38 AZOBR_RS14735 aspartate-semialdehyde dehydrogenase 0.45 AZOBR_RS09455 glycogen branching protein
Pseudomonas lactucae CFBP13502 0.38 GEMAOFIL_03943 USG-1 protein 0.45 GEMAOFIL_02810 1,4-alpha-glucan branching enzyme GlgB low > 96
Pseudomonas orientalis W4I3 0.38 QF045_RS20715 aspartate-semialdehyde dehydrogenase 0.45 QF045_RS17045 1,4-alpha-glucan branching protein GlgB low > 93
Mycobacterium tuberculosis H37Rv 0.37 Rv3708c Aspartate-semialdehyde dehydrogenase Asd (ASA dehydrogenase) (ASADH) (aspartic semialdehyde dehydrogenase) (L-aspartate-beta-semialdehyde dehydrogenase) 0.38 Rv1326c 1,4-alpha-glucan branching enzyme GlgB (glycogen branching enzyme)
Pseudomonas simiae WCS417 0.37 PS417_18575 aspartate-semialdehyde dehydrogenase 0.45 PS417_12805 glycogen branching protein low > 88
Pseudomonas fluorescens SBW25 0.37 PFLU_RS20555 aspartate-semialdehyde dehydrogenase 0.45 PFLU_RS13485 1,4-alpha-glucan branching protein GlgB low > 109
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS20555 aspartate-semialdehyde dehydrogenase 0.45 PFLU_RS13485 1,4-alpha-glucan branching protein GlgB low > 109
Pseudomonas sp. S08-1 0.36 OH686_04460 Aspartate-semialdehyde dehydrogenase 0.45 OH686_01540 1,4-alpha-glucan branching enzyme low > 80
Pseudomonas sp. BP01 0.36 JOY50_RS16605 aspartate-semialdehyde dehydrogenase 0.47 JOY50_RS06760 glgB 1,4-alpha-glucan branching protein GlgB low > 84
Pseudomonas putida KT2440 0.36 PP_1992 aspartate-semialdehyde dehydrogenase 0.47 PP_4058 1,4-alpha-glucan branching enzyme low > 96
Pseudomonas aeruginosa PUPa3 0.34 DQ20_RS34210 aspartate-semialdehyde dehydrogenase 0.46 DQ20_RS39285 glgB;go_function=1%2C4-alpha-glucan 1 4-alpha-glucan branching protein GlgB 0.22 62
Pseudomonas aeruginosa PA14 0.34 IKLFDK_15855 aspartate-semialdehyde dehydrogenase 0.46 IKLFDK_10535 1 4-alpha-glucan branching protein GlgB low > 98
Pseudomonas aeruginosa MRSN321 0.34 DY961_RS01345 aspartate-semialdehyde dehydrogenase 0.46 DY961_RS17020 glgB;go_function=1%2C4-alpha-glucan 1 4-alpha-glucan branching protein GlgB low > 100
Pseudomonas stutzeri RCH2 0.31 Psest_2587 Aspartate-semialdehyde dehydrogenase 0.45 Psest_2158 alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase low > 67
Bifidobacterium breve UCC2003 0.12 BBR_RS11025 aspartate-semialdehyde dehydrogenase 0.40 BBR_RS14240 1,4-alpha-glucan branching protein GlgB low > 34

Not shown: 26 genomes with orthologs for CSW01_10520 only; 13 genomes with orthologs for CSW01_14125 only