| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_05370 | | YbaB/EbfC family nucleoid-associated protein | 1.0 | CSW01_13715 | | pimeloyl-[acyl-carrier protein] methyl ester esterase | 0.58 | 2 |
| Escherichia coli BL21 | 0.88 | ECD_00422 | | DNA-binding protein, putative nucleoid-associated protein | 0.50 | ECD_03264 | | pimeloyl-ACP methyl ester carboxylesterase | — | — |
| Escherichia fergusonii Becca | 0.88 | EFB2_03587 | | Nucleoid-associated protein YbaB | 0.49 | EFB2_00416 | | Pimeloyl-[acyl-carrier protein] methyl ester esterase | low | > 86 |
| Escherichia coli ECRC102 | 0.88 | NIAGMN_06215 | ybaB | YbaB/EbfC family nucleoid-associated protein | 0.48 | NIAGMN_14770 | bioH | pimeloyl-ACP methyl ester esterase BioH | — | — |
| Escherichia coli ECRC99 | 0.88 | KEDOAH_19805 | ybaB | YbaB/EbfC family nucleoid-associated protein | 0.48 | KEDOAH_11140 | bioH | pimeloyl-ACP methyl ester esterase BioH | — | — |
| Escherichia coli ECOR27 | 0.88 | NOLOHH_01090 | ybaB | YbaB/EbfC family nucleoid-associated protein | 0.49 | NOLOHH_08785 | bioH | pimeloyl-ACP methyl ester esterase BioH | — | — |
| Escherichia coli ECRC100 | 0.88 | OKFHMN_08160 | ybaB | YbaB/EbfC family nucleoid-associated protein | 0.48 | OKFHMN_17000 | bioH | pimeloyl-ACP methyl ester esterase BioH | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.88 | OHPLBJKB_03203 | | Nucleoid-associated protein YbaB | 0.50 | OHPLBJKB_00291 | | Pimeloyl-[acyl-carrier protein] methyl ester esterase | — | — |
| Escherichia coli BW25113 | 0.88 | b0471 | ybaB | hypothetical protein (NCBI) | 0.50 | b3412 | bioH | carboxylesterase of pimeloyl-CoA synthesis (NCBI) | low | > 76 |
| Escherichia coli ECRC62 | 0.88 | BNILDI_22510 | ybaB | YbaB/EbfC family nucleoid-associated protein | 0.50 | BNILDI_02730 | bioH | pimeloyl-ACP methyl ester esterase BioH | — | — |
| Escherichia coli Nissle 1917 | 0.88 | ECOLIN_RS02800 | | YbaB/EbfC family nucleoid-associated protein | 0.49 | ECOLIN_RS19490 | | pimeloyl-ACP methyl ester esterase BioH | — | — |
| Escherichia coli ECRC101 | 0.88 | MCAODC_27385 | ybaB | YbaB/EbfC family nucleoid-associated protein | 0.48 | MCAODC_07530 | bioH | pimeloyl-ACP methyl ester esterase BioH | low | > 87 |
| Escherichia coli ECOR38 | 0.88 | HEPCGN_06775 | ybaB | YbaB/EbfC family nucleoid-associated protein | 0.49 | HEPCGN_15810 | bioH | pimeloyl-ACP methyl ester esterase BioH | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.88 | GFF4389 | | FIG000557: hypothetical protein co-occurring with RecR | 0.46 | GFF605 | | Biotin synthesis protein BioH | — | — |
| Escherichia coli ECRC98 | 0.88 | JDDGAC_11810 | ybaB | YbaB/EbfC family nucleoid-associated protein | 0.48 | JDDGAC_20630 | bioH | pimeloyl-ACP methyl ester esterase BioH | — | — |
| Shewanella loihica PV-4 | 0.87 | Shew_2234 | | hypothetical protein (RefSeq) | 0.39 | Shew_3630 | | bioH protein (RefSeq) | — | — |
| Klebsiella pneumoniae MKP103 | 0.86 | KDGMDA_14885 | | YbaB/EbfC family nucleoid-associated protein | 0.50 | KDGMDA_07015 | | pimeloyl-ACP methyl ester esterase BioH | — | — |
| Rahnella sp. WP5 | 0.85 | EX31_RS22520 | | YbaB/EbfC family nucleoid-associated protein | 0.44 | EX31_RS04915 | | pimeloyl-ACP methyl ester esterase BioH | — | — |
| Dickeya dianthicola 67-19 | 0.85 | HGI48_RS05835 | | YbaB/EbfC family nucleoid-associated protein | 0.44 | HGI48_RS19775 | | pimeloyl-ACP methyl ester esterase BioH | — | — |
| Dickeya dadantii 3937 | 0.85 | DDA3937_RS05785 | | YbaB/EbfC family nucleoid-associated protein | 0.44 | DDA3937_RS19645 | | pimeloyl-ACP methyl ester esterase BioH | — | — |
| Shewanella amazonensis SB2B | 0.85 | Sama_1311 | | hypothetical protein (RefSeq) | 0.38 | Sama_3505 | | bioH protein (RefSeq) | — | — |
| Dickeya dianthicola ME23 | 0.85 | DZA65_RS06160 | | YbaB/EbfC family nucleoid-associated protein | 0.44 | DZA65_RS20865 | | pimeloyl-ACP methyl ester esterase BioH | — | — |
| Shewanella sp. ANA-3 | 0.84 | Shewana3_2445 | | hypothetical protein (RefSeq) | 0.39 | Shewana3_4010 | | bioH protein (RefSeq) | — | — |
| Pantoea sp. MT58 | 0.83 | IAI47_14470 | | YbaB/EbfC family nucleoid-associated protein | 0.47 | IAI47_01790 | | pimeloyl-ACP methyl ester esterase BioH | low | > 76 |
| Pantoea agglomerans CFBP13505 P0401 | 0.82 | PagCFBP13505_RS10725 | | YbaB/EbfC family nucleoid-associated protein | 0.48 | PagCFBP13505_RS18310 | | pimeloyl-ACP methyl ester esterase BioH | — | — |
| Shewanella oneidensis MR-1 | 0.82 | SO2014 | | conserved hypothetical protein TIGR00103 (NCBI ptt file) | 0.35 | SO4626 | bioH | bioH protein (NCBI ptt file) | 0.56 | 3 |
| Erwinia tracheiphila SCR3 | 0.82 | LU632_RS18110 | | YbaB/EbfC family nucleoid-associated protein | 0.49 | LU632_RS22975 | bioH | pimeloyl-ACP methyl ester esterase BioH | — | — |
| Erwinia tracheiphila HP pepo 2.2 | 0.82 | IJEDHG_16640 | ybaB | YbaB/EbfC family nucleoid-associated protein | 0.49 | IJEDHG_11925 | bioH | pimeloyl-ACP methyl ester esterase BioH | — | — |
| Erwinia amylovora T8 | 0.81 | OLJFJH_17810 | | YbaB/EbfC family nucleoid-associated protein | 0.46 | OLJFJH_04180 | | pimeloyl-ACP methyl ester esterase BioH | low | > 58 |
| Alteromonas macleodii MIT1002 | 0.79 | MIT1002_02653 | | Nucleoid-associated protein YbaB | 0.38 | MIT1002_04016 | | Pimelyl-[acyl-carrier protein] methyl ester esterase | 0.47 | 56 |
| Enterobacter asburiae PDN3 | 0.79 | EX28DRAFT_2486 | | DNA-binding protein, YbaB/EbfC family | 0.48 | EX28DRAFT_4130 | | pimelyl-[acyl-carrier protein] methyl ester esterase | — | — |
| Enterobacter sp. TBS_079 | 0.78 | MPMX20_01073 | | Nucleoid-associated protein YbaB | 0.48 | MPMX20_04299 | | Pimeloyl-[acyl-carrier protein] methyl ester esterase | low | > 85 |
| Pectobacterium carotovorum WPP14 | 0.75 | HER17_RS15700 | | YbaB/EbfC family nucleoid-associated protein | 0.48 | HER17_RS01555 | | pimeloyl-ACP methyl ester esterase BioH | — | — |
| Serratia liquefaciens MT49 | 0.73 | IAI46_05235 | | YbaB/EbfC family nucleoid-associated protein | 0.44 | IAI46_23825 | | pimeloyl-ACP methyl ester esterase BioH | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.73 | Psyr_1826 | | Conserved hypothetical protein 103 | 0.19 | Psyr_4685 | | bioH protein | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.73 | Psyr_1826 | | Conserved hypothetical protein 103 | 0.19 | Psyr_4685 | | bioH protein | — | — |
| Pseudomonas aeruginosa PA14 | 0.72 | IKLFDK_07320 | | YbaB/EbfC family nucleoid-associated protein | 0.16 | IKLFDK_22925 | | transporter | — | — |
| Pseudomonas aeruginosa PUPa3 | 0.72 | DQ20_RS53420 | | YbaB/EbfC family nucleoid-associated protein | 0.16 | DQ20_RS36815 | | alpha/beta fold hydrolase | — | — |
| Pseudomonas aeruginosa MRSN321 | 0.72 | DY961_RS19290 | | YbaB/EbfC family nucleoid-associated protein | 0.16 | DY961_RS22515 | | alpha/beta fold hydrolase | — | — |
| Pseudomonas sp. S08-1 | 0.72 | OH686_02390 | | DNA-binding protein, YbaB/EbfC family | 0.17 | OH686_10345 | | Pimeloyl-[acyl-carrier protein] methyl ester esterase BioH | — | — |
| Pseudomonas sp. BP01 | 0.71 | JOY50_RS00140 | | YbaB/EbfC family nucleoid-associated protein | 0.20 | JOY50_RS17940 | | alpha/beta fold hydrolase | low | > 84 |
| Pseudomonas stutzeri RCH2 | 0.71 | Psest_2546 | | DNA-binding protein, YbaB/EbfC family | 0.15 | Psest_0413 | | Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) | — | — |
| Pseudomonas putida KT2440 | 0.71 | PP_4268 | | nucleoid-associated broad specificity regulator | 0.21 | PP_0364 | | pimeloyl-[acp] methyl ester esterase | low | > 96 |
| Klebsiella michiganensis M5al | 0.71 | BWI76_RS06825 | | nucleoid-associated protein, YbaB/EbfC family | 0.51 | BWI76_RS26630 | | pimeloyl-[acyl-carrier protein] methyl ester esterase | — | — |
| Pseudomonas segetis P6 | 0.70 | MPMX49_02229 | | Nucleoid-associated protein YbaB | 0.15 | MPMX49_03255 | | 3-oxoadipate enol-lactonase 2 | — | — |
| Pseudomonas sp. SVBP6 | 0.70 | COO64_RS18600 | | YbaB/EbfC family nucleoid-associated protein | 0.20 | COO64_RS22715 | | alpha/beta fold hydrolase | — | — |
| Marinobacter adhaerens HP15 | 0.66 | HP15_1884 | | protein belonging to uncharacterized protein family UPF0133 | 0.12 | HP15_2802 | | alpha/beta hydrolase fold protein | — | — |
| Pseudomonas orientalis W4I3 | 0.65 | QF045_RS22615 | | YbaB/EbfC family nucleoid-associated protein | 0.18 | QF045_RS00405 | | alpha/beta fold hydrolase | — | — |
| Paraburkholderia graminis OAS925 | 0.65 | ABIE53_002047 | | DNA-binding YbaB/EbfC family protein | 0.11 | ABIE53_001096 | | sigma-B regulation protein RsbQ | — | — |
| Pseudomonas sp. RS175 | 0.65 | PFR28_01075 | | Nucleoid-associated protein YbaB | 0.19 | PFR28_04101 | | Pimeloyl-[acyl-carrier protein] methyl ester esterase | — | — |
| Burkholderia phytofirmans PsJN | 0.65 | BPHYT_RS09060 | | hypothetical protein | 0.11 | BPHYT_RS26315 | | sigma factor sigB regulation protein rsbQ | — | — |
| Variovorax sp. SCN45 | 0.64 | GFF1109 | | Nucleoid-associated protein YaaK | 0.12 | GFF2595 | | Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.64 | AO356_02505 | | nucleoid-associated protein | 0.19 | AO356_14145 | | transporter | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.64 | Pf6N2E2_2327 | | FIG000557: hypothetical protein co-occurring with RecR | 0.19 | Pf6N2E2_4762 | | Biotin synthesis protein BioH | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.64 | Pf1N1B4_3863 | | FIG000557: hypothetical protein co-occurring with RecR | 0.22 | Pf1N1B4_2489 | | Biotin synthesis protein BioH | — | — |
| Herbaspirillum seropedicae SmR1 | 0.64 | HSERO_RS18365 | | hypothetical protein | 0.12 | HSERO_RS22575 | | arylesterase | low | > 78 |
| Dechlorosoma suillum PS | 0.64 | Dsui_1810 | | DNA-binding protein, YbaB/EbfC family | 0.21 | Dsui_2882 | | putative hydrolase or acyltransferase of alpha/beta superfamily | low | > 51 |
| Pseudomonas fluorescens FW300-N2E3 | 0.63 | AO353_00680 | | nucleoid-associated protein | 0.22 | AO353_07515 | | transporter | — | — |
| Pseudomonas simiae WCS417 | 0.63 | PS417_20810 | | hypothetical protein | 0.21 | PS417_25995 | | transporter | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.63 | PfGW456L13_4076 | | FIG000557: hypothetical protein co-occurring with RecR | 0.18 | PfGW456L13_1149 | | Biotin synthesis protein BioH | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.63 | PFLU_RS22425 | | YbaB/EbfC family nucleoid-associated protein | 0.21 | PFLU_RS27640 | | alpha/beta fold hydrolase | — | — |
| Pseudomonas lactucae CFBP13502 | 0.63 | GEMAOFIL_04306 | | Nucleoid-associated protein YbaB | 0.19 | GEMAOFIL_05320 | | Pimeloyl-[acyl-carrier protein] methyl ester esterase | — | — |
| Pseudomonas fluorescens SBW25 | 0.63 | PFLU_RS22425 | | YbaB/EbfC family nucleoid-associated protein | 0.21 | PFLU_RS27640 | | alpha/beta fold hydrolase | low | > 109 |
| Dyella japonica UNC79MFTsu3.2 | 0.60 | ABZR86_RS06240 | | YbaB/EbfC family nucleoid-associated protein | 0.24 | ABZR86_RS15825 | | pimeloyl-ACP methyl ester esterase BioH | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.59 | Xcc-8004.4013.1 | | FIG000557: hypothetical protein co-occurring with RecR | 0.24 | Xcc-8004.502.1 | | Biotin synthesis protein BioH | low | > 74 |
| Kangiella aquimarina DSM 16071 | 0.59 | B158DRAFT_2479 | | DNA-binding protein, YbaB/EbfC family | 0.41 | B158DRAFT_0866 | | putative pimeloyl-BioC--CoA transferase BioH | — | — |
| Rhodanobacter sp000427505 FW510-R12 | 0.58 | LRK53_RS08820 | | YbaB/EbfC family nucleoid-associated protein | 0.22 | LRK53_RS03025 | | pimeloyl-ACP methyl ester esterase BioH | low | > 59 |
| Rhodanobacter denitrificans FW104-10B01 | 0.58 | LRK54_RS01255 | | YbaB/EbfC family nucleoid-associated protein | 0.23 | LRK54_RS10245 | | pimeloyl-ACP methyl ester esterase BioH | — | — |
| Rhodanobacter denitrificans MT42 | 0.57 | LRK55_RS01025 | | YbaB/EbfC family nucleoid-associated protein | 0.23 | LRK55_RS09885 | | pimeloyl-ACP methyl ester esterase BioH | — | — |
| Rhodanobacter sp. FW510-T8 | 0.56 | OKGIIK_05650 | ybaB | YbaB/EbfC family nucleoid-associated protein | 0.23 | OKGIIK_13665 | bioH | pimeloyl-ACP methyl ester esterase BioH | low | > 53 |
| Lysobacter sp. OAE881 | 0.55 | ABIE51_RS14015 | | YbaB/EbfC family nucleoid-associated protein | 0.27 | ABIE51_RS01155 | | pimeloyl-ACP methyl ester esterase BioH | — | — |
| Pseudomonas sp. DMC3 | 0.54 | GFF706 | | Nucleoid-associated protein YbaB | 0.21 | GFF74 | | Pimeloyl-[acyl-carrier protein] methyl ester esterase | low | > 89 |
| Xanthobacter sp. DMC5 | 0.45 | GFF2305 | | Nucleoid-associated protein YbaB | 0.10 | GFF3052 | | AB hydrolase superfamily protein YdjP | — | — |
| Agrobacterium fabrum C58 | 0.44 | Atu0095 | | hypothetical protein | 0.14 | Atu5296 | | arylester hydrolase | — | — |
| Sinorhizobium meliloti 1021 | 0.43 | SMc02906 | | hypothetical protein | 0.11 | SM_b20860 | | non-heme haloperodidase | low | > 103 |
| Methylophilus sp. DMC18 | 0.41 | GFF1238 | | Nucleoid-associated protein YbaB | 0.32 | GFF1684 | | Pimeloyl-[acyl-carrier protein] methyl ester esterase | — | — |
| Phaeobacter inhibens DSM 17395 | 0.40 | PGA1_c30280 | | DNA-binding protein, YbaB/EbfC family | 0.14 | PGA1_c04570 | | putative 3-oxoadipate enol-lactonase | low | > 62 |
| Azospirillum brasilense Sp245 | 0.40 | AZOBR_RS03875 | | hypothetical protein | 0.12 | AZOBR_RS28610 | | arylesterase | — | — |
| Caulobacter crescentus NA1000 | 0.32 | CCNA_00269 | | YbaB/EbfC-family DNA-binding protein | 0.12 | CCNA_02313 | | alpha/beta hydrolase family protein | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.32 | CCNA_00269 | | YbaB/EbfC-family DNA-binding protein | 0.12 | CCNA_02313 | | alpha/beta hydrolase family protein | low | > 67 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.31 | CA264_04550 | | nucleoid-associated protein, YbaB/EbfC family | 0.14 | CA264_18845 | | alpha/beta hydrolase | low | > 74 |
| Synechocystis sp000284455 PCC 6803 | 0.26 | SGL_RS04460 | | YbaB/EbfC family nucleoid-associated protein | 0.12 | SGL_RS13800 | | alpha/beta hydrolase | — | — |
Not shown: 28 genomes with orthologs for CSW01_05370 only; 3 genomes with orthologs for CSW01_13715 only