Conservation of cofitness between CSW01_00850 and CSW01_13430 in Vibrio cholerae E7946 ATCC 55056

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00850 multidrug resistance protein 1.0 CSW01_13430 succinate dehydrogenase/fumarate reductase iron-sulfur subunit 0.63 14
Xanthobacter sp. DMC5 0.40 GFF2738 Efflux pump membrane transporter BepE 0.28 GFF4070 Fumarate reductase iron-sulfur subunit — —
Enterobacter asburiae PDN3 0.24 EX28DRAFT_2496 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 0.73 EX28DRAFT_3354 succinate dehydrogenase and fumarate reductase iron-sulfur protein low > 76
Klebsiella michiganensis M5al 0.24 BWI76_RS06775 multidrug efflux RND transporter permease subunit 0.74 BWI76_RS02450 succinate dehydrogenase/fumarate reductase iron-sulfur subunit low > 92
Escherichia coli BW25113 0.24 b2470 acrD aminoglycoside/multidrug efflux system (NCBI) 0.74 b4153 frdB fumarate reductase (anaerobic), Fe-S subunit (NCBI) low > 76
Escherichia coli ECOR38 0.24 HEPCGN_21140 acrD multidrug efflux RND transporter permease AcrD 0.74 HEPCGN_10575 frdB fumarate reductase iron-sulfur protein low > 88
Escherichia fergusonii Becca 0.24 EFB2_01418 Multidrug efflux pump subunit AcrB 0.74 EFB2_04380 Fumarate reductase iron-sulfur subunit low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.24 OHPLBJKB_01261 Multidrug efflux pump subunit AcrB 0.74 OHPLBJKB_03887 Fumarate reductase iron-sulfur subunit low > 74
Escherichia coli ECRC62 0.24 BNILDI_12460 acrD multidrug efflux RND transporter permease AcrD 0.74 BNILDI_06880 frdB fumarate reductase iron-sulfur protein low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.24 GFF4246 RND efflux system, inner membrane transporter CmeB 0.74 GFF1997 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) low > 78
Escherichia coli BL21 0.24 ECD_02361 aminoglycoside/multidrug efflux system 0.74 ECD_04025 fumarate reductase (anaerobic), Fe-S subunit low > 61
Enterobacter sp. TBS_079 0.24 MPMX20_01064 Multidrug efflux pump subunit AcrB 0.74 MPMX20_00436 Fumarate reductase iron-sulfur subunit low > 85
Escherichia coli ECRC101 0.24 MCAODC_12500 acrD multidrug efflux RND transporter permease AcrD 0.74 MCAODC_02860 frdB fumarate reductase iron-sulfur protein low > 88
Escherichia coli Nissle 1917 0.24 ECOLIN_RS14090 multidrug efflux RND transporter permease AcrD 0.74 ECOLIN_RS26280 fumarate reductase iron-sulfur protein — —
Escherichia coli ECOR27 0.24 NOLOHH_13650 acrD multidrug efflux RND transporter permease AcrD 0.74 NOLOHH_04610 frdB fumarate reductase iron-sulfur protein low > 76
Escherichia coli ECRC100 0.24 OKFHMN_21970 acrD multidrug efflux RND transporter permease AcrD 0.74 OKFHMN_12350 frdB fumarate reductase iron-sulfur protein low > 79
Escherichia coli ECRC99 0.24 KEDOAH_06250 acrD multidrug efflux RND transporter permease AcrD 0.74 KEDOAH_15815 frdB fumarate reductase iron-sulfur protein — —
Escherichia coli ECRC102 0.24 NIAGMN_19740 acrD multidrug efflux RND transporter permease AcrD 0.74 NIAGMN_10195 frdB fumarate reductase iron-sulfur protein low > 80
Escherichia coli ECRC98 0.24 JDDGAC_25915 acrD multidrug efflux RND transporter permease AcrD 0.74 JDDGAC_15985 frdB fumarate reductase iron-sulfur protein low > 87
Klebsiella pneumoniae MKP103 0.24 KDGMDA_14835 acriflavine resistance protein B 0.74 KDGMDA_10945 fumarate reductase iron-sulfur protein low > 95
Desulfovibrio vulgaris Miyazaki F 0.24 DvMF_2163 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family (RefSeq) 0.23 DvMF_2460 frdB fumarate reductase iron-sulfur subunit (RefSeq) low > 51
Serratia liquefaciens MT49 0.23 IAI46_18690 multidrug efflux RND transporter permease AcrD 0.75 IAI46_01545 succinate dehydrogenase/fumarate reductase iron-sulfur subunit low > 86
Rahnella sp. WP5 0.23 EX31_RS22470 multidrug efflux RND transporter permease subunit 0.73 EX31_RS08905 succinate dehydrogenase/fumarate reductase iron-sulfur subunit low > 89
Pectobacterium carotovorum WPP14 0.23 HER17_RS01560 multidrug efflux RND transporter permease AcrD 0.74 HER17_RS02385 succinate dehydrogenase/fumarate reductase iron-sulfur subunit low > 75
Dickeya dadantii 3937 0.23 DDA3937_RS05735 multidrug efflux RND transporter permease subunit 0.73 DDA3937_RS18970 succinate dehydrogenase/fumarate reductase iron-sulfur subunit low > 74
Dickeya dianthicola 67-19 0.22 HGI48_RS05790 multidrug efflux RND transporter permease subunit 0.74 HGI48_RS19065 succinate dehydrogenase/fumarate reductase iron-sulfur subunit low > 71
Dickeya dianthicola ME23 0.22 DZA65_RS06115 multidrug efflux RND transporter permease subunit 0.74 DZA65_RS20185 succinate dehydrogenase/fumarate reductase iron-sulfur subunit low > 75
Erwinia tracheiphila SCR3 0.22 LU632_RS18185 efflux RND transporter permease subunit 0.71 LU632_RS01915 succinate dehydrogenase/fumarate reductase iron-sulfur subunit — —
Erwinia tracheiphila HP pepo 2.2 0.21 IJEDHG_16580 adeB hydrophobe/amphiphile efflux-1 family RND transporter 0.71 IJEDHG_07000 succinate dehydrogenase/fumarate reductase iron-sulfur subunit — —

Not shown: 63 genomes with orthologs for CSW01_00850 only; 3 genomes with orthologs for CSW01_13430 only