Conservation of cofitness between CSW01_13280 and CSW01_13415 in Vibrio cholerae E7946 ATCC 55056

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_13280 phosphoglycolate phosphatase 1.0 CSW01_13415 rhodanese-like domain-containing protein 0.46 12
Shewanella oneidensis MR-1 0.42 SO0293 gph phosphoglycolate phosphatase (NCBI ptt file) 0.50 SO0050 rhodanese domain protein (NCBI ptt file) low > 76
Klebsiella michiganensis M5al 0.42 BWI76_RS26065 phosphoglycolate phosphatase 0.52 BWI76_RS27225 rhodanese-like domain-containing protein low > 92
Shewanella sp. ANA-3 0.42 Shewana3_3887 phosphoglycolate phosphatase (RefSeq) 0.51 Shewana3_0052 rhodanese domain-containing protein (RefSeq) low > 73
Shewanella amazonensis SB2B 0.42 Sama_3361 phosphoglycolate phosphatase (RefSeq) 0.41 Sama_0061 rhodanese-like protein (RefSeq) low > 62
Enterobacter asburiae PDN3 0.41 EX28DRAFT_4157 2-phosphoglycolate phosphatase, prokaryotic 0.53 EX28DRAFT_3862 Rhodanese-related sulfurtransferase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.41 GFF634 Phosphoglycolate phosphatase (EC 3.1.3.18) 0.53 GFF399 FIG136845: Rhodanese-related sulfurtransferase low > 78
Pseudomonas stutzeri RCH2 0.41 Psest_3651 2-phosphoglycolate phosphatase, prokaryotic 0.23 Psest_0163 Rhodanese-related sulfurtransferase — —
Shewanella loihica PV-4 0.40 Shew_0220 phosphoglycolate phosphatase (RefSeq) 0.54 Shew_3805 rhodanese domain-containing protein (RefSeq) low > 60
Serratia liquefaciens MT49 0.40 IAI46_23680 phosphoglycolate phosphatase 0.54 IAI46_24705 rhodanese-like domain-containing protein low > 87
Klebsiella pneumoniae MKP103 0.40 KDGMDA_06890 phosphoglycolate phosphatase 0.52 KDGMDA_07910 rhodanese-like domain-containing protein low > 95
Enterobacter sp. TBS_079 0.40 MPMX20_04274 Phosphoglycolate phosphatase 0.53 MPMX20_00122 putative protein YibN low > 85
Pectobacterium carotovorum WPP14 0.40 HER17_RS01800 phosphoglycolate phosphatase 0.53 HER17_RS20745 rhodanese-like domain-containing protein low > 75
Dickeya dianthicola 67-19 0.40 HGI48_RS19655 phosphoglycolate phosphatase 0.53 HGI48_RS00785 rhodanese-like domain-containing protein low > 71
Dickeya dadantii 3937 0.40 DDA3937_RS19525 phosphoglycolate phosphatase 0.53 DDA3937_RS20415 rhodanese-like domain-containing protein low > 74
Pantoea sp. MT58 0.40 IAI47_01915 phosphoglycolate phosphatase 0.47 IAI47_00725 rhodanese-like domain-containing protein low > 76
Pantoea agglomerans CFBP13505 P0401 0.40 PagCFBP13505_RS21680 phosphoglycolate phosphatase 0.47 PagCFBP13505_RS18620 rhodanese-like domain-containing protein low > 74
Escherichia coli BL21 0.40 ECD_03237 phosphoglycolate phosphatase 0.51 ECD_03469 putative rhodanese-related sulfurtransferase low > 61
Escherichia coli BW25113 0.40 b3385 gph phosphoglycolate phosphatase (NCBI) 0.51 b3611 yibN predicted rhodanese-related sulfurtransferase (NCBI) low > 76
Escherichia coli ECOR38 0.39 HEPCGN_15955 gph phosphoglycolate phosphatase 0.51 HEPCGN_14580 yibN Uncharacterized protein YibN low > 88
Escherichia coli ECRC102 0.39 NIAGMN_14905 gph phosphoglycolate phosphatase 0.51 NIAGMN_13500 yibN Uncharacterized protein YibN low > 80
Escherichia coli ECOR27 0.39 NOLOHH_08925 gph phosphoglycolate phosphatase 0.51 NOLOHH_07620 yibN Uncharacterized protein YibN low > 76
Escherichia coli ECRC101 0.39 MCAODC_07665 gph phosphoglycolate phosphatase 0.51 MCAODC_06250 yibN Uncharacterized protein YibN low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_00318 Phosphoglycolate phosphatase 0.51 OHPLBJKB_00088 putative protein YibN low > 74
Dickeya dianthicola ME23 0.39 DZA65_RS20740 phosphoglycolate phosphatase 0.53 DZA65_RS00840 rhodanese-like domain-containing protein low > 75
Escherichia coli ECRC100 0.39 OKFHMN_17135 gph phosphoglycolate phosphatase 0.51 OKFHMN_15740 yibN Uncharacterized protein YibN low > 79
Escherichia coli ECRC98 0.39 JDDGAC_20765 gph phosphoglycolate phosphatase 0.51 JDDGAC_19365 yibN Uncharacterized protein YibN low > 87
Escherichia coli ECRC99 0.39 KEDOAH_11005 gph phosphoglycolate phosphatase 0.51 KEDOAH_12410 yibN Uncharacterized protein YibN — —
Escherichia coli ECRC62 0.39 BNILDI_02595 gph phosphoglycolate phosphatase 0.51 BNILDI_03895 yibN Uncharacterized protein YibN low > 75
Escherichia coli Nissle 1917 0.39 ECOLIN_RS19340 phosphoglycolate phosphatase 0.51 ECOLIN_RS20610 rhodanese-like domain-containing protein low > 55
Erwinia tracheiphila SCR3 0.39 LU632_RS22845 phosphoglycolate phosphatase 0.48 LU632_RS21890 rhodanese-like domain-containing protein low > 73
Erwinia tracheiphila HP pepo 2.2 0.39 IJEDHG_12055 gph phosphoglycolate phosphatase 0.48 IJEDHG_07905 rhodanese-like domain-containing protein low > 61
Escherichia fergusonii Becca 0.39 EFB2_00443 Phosphoglycolate phosphatase 0.51 EFB2_00199 putative protein YibN low > 86
Pseudomonas segetis P6 0.37 MPMX49_00888 Phosphoglycolate phosphatase 0.25 MPMX49_04293 putative protein YibN low > 75
Rahnella sp. WP5 0.37 EX31_RS04700 phosphoglycolate phosphatase 0.52 EX31_RS14355 rhodanese-like domain-containing protein low > 89
Alteromonas macleodii MIT1002 0.36 MIT1002_02231 Phosphoglycolate phosphatase 0.40 MIT1002_00488 Thiosulfate sulfurtransferase GlpE low > 70
Methylophilus sp. DMC18 0.35 GFF2050 Phosphoglycolate phosphatase, plasmid 0.30 GFF1794 putative protein YibN — —
Erwinia amylovora T8 0.34 OLJFJH_04070 phosphoglycolate phosphatase 0.42 OLJFJH_05900 rhodanese-like domain-containing protein low > 58
Hydrogenophaga sp. GW460-11-11-14-LB1 0.33 GFF2201 Phosphoglycolate phosphatase (EC 3.1.3.18) 0.25 GFF1225 FIG136845: Rhodanese-related sulfurtransferase low > 90
Acinetobacter baumannii LAC-4 0.32 RR41_RS17615 phosphoglycolate phosphatase 0.19 RR41_RS16405 rhodanese-like domain-containing protein low > 55
Variovorax sp. SCN45 0.29 GFF5899 Phosphoglycolate phosphatase (EC 3.1.3.18) 0.25 GFF2570 Rhodanese-related sulfurtransferase YibN low > 127
Marinobacter adhaerens HP15 0.29 HP15_3287 phosphoglycolate phosphatase 0.24 HP15_3004 rhodanese domain protein low > 73
Castellaniella sp019104865 MT123 0.29 ABCV34_RS10275 phosphoglycolate phosphatase 0.24 ABCV34_RS14265 rhodanese-like domain-containing protein — —
Paraburkholderia sabiae LMG 24235 0.28 QEN71_RS27545 phosphoglycolate phosphatase 0.28 QEN71_RS01450 rhodanese-like domain-containing protein low > 153
Acinetobacter radioresistens SK82 0.28 MPMX26_00198 Phosphoglycolate phosphatase 0.19 MPMX26_02632 putative protein YibN low > 36
Ralstonia solanacearum PSI07 0.27 RPSI07_RS07070 phosphoglycolate phosphatase 0.33 RPSI07_RS22405 rhodanese-like domain-containing protein low > 81
Xanthomonas campestris pv. campestris strain 8004 0.27 Xcc-8004.4534.1 Phosphoglycolate phosphatase (EC 3.1.3.18) 0.33 Xcc-8004.269.1 FIG136845: Rhodanese-related sulfurtransferase low > 74
Dechlorosoma suillum PS 0.27 Dsui_0220 2-phosphoglycolate phosphatase 0.30 Dsui_1273 Rhodanese-related sulfurtransferase low > 51
Acidovorax sp. GW101-3H11 0.26 Ac3H11_763 Phosphoglycolate phosphatase (EC 3.1.3.18) 0.22 Ac3H11_3857 FIG136845: Rhodanese-related sulfurtransferase low > 79
Ralstonia sp. UNC404CL21Col 0.25 ABZR87_RS02135 phosphoglycolate phosphatase 0.31 ABZR87_RS06755 rhodanese-like domain-containing protein low > 80
Lysobacter sp. OAE881 0.23 ABIE51_RS13485 phosphoglycolate phosphatase 0.34 ABIE51_RS00485 rhodanese-like domain-containing protein low > 62
Bacteroides ovatus ATCC 8483 0.21 BACOVA_05034 HAD hydrolase, family IA, variant 1 0.20 BACOVA_03532 rhodanese-like protein low > 96
Dyella japonica UNC79MFTsu3.2 0.20 ABZR86_RS08775 HAD-IA family hydrolase 0.27 ABZR86_RS16930 rhodanese-like domain-containing protein low > 74
Rhodanobacter sp. FW510-T8 0.19 OKGIIK_09515 gph phosphoglycolate phosphatase 0.24 OKGIIK_16745 pspE rhodanese-like domain-containing protein low > 53
Rhodanobacter denitrificans FW104-10B01 0.19 LRK54_RS02460 phosphoglycolate phosphatase 0.26 LRK54_RS06885 rhodanese-like domain-containing protein 0.82 13
Rhodanobacter sp000427505 FW510-R12 0.19 LRK53_RS07485 phosphoglycolate phosphatase 0.24 LRK53_RS01520 rhodanese-like domain-containing protein low > 59
Rhodanobacter denitrificans MT42 0.19 LRK55_RS02215 phosphoglycolate phosphatase 0.26 LRK55_RS06630 rhodanese-like domain-containing protein low > 63
Kangiella aquimarina DSM 16071 0.18 B158DRAFT_1769 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 0.35 B158DRAFT_0709 Rhodanese-related sulfurtransferase low > 40

Not shown: 33 genomes with orthologs for CSW01_13280 only; 20 genomes with orthologs for CSW01_13415 only