Conservation of cofitness between CSW01_15165 and CSW01_12860 in Vibrio cholerae E7946 ATCC 55056

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_15165 DNA-binding response regulator 1.0 CSW01_12860 thiamine/thiamine pyrophosphate ABC transporter permease ThiP 0.64 9
Agrobacterium fabrum C58 0.41 Atu0629 two component response regulator 0.28 Atu2713 ABC transporter, membrane spanning protein (thiamine) low > 89
Klebsiella pneumoniae MKP103 0.41 KDGMDA_00710 copper/silver response regulator transcription factor SilR 0.38 KDGMDA_12835 thiamine/thiamine pyrophosphate ABC transporter permease ThiP low > 95
Enterobacter asburiae PDN3 0.41 EX28DRAFT_1165 heavy metal response regulator 0.39 EX28DRAFT_3659 thiamine ABC transporter, permease protein low > 76
Dickeya dianthicola ME23 0.41 DZA65_RS03595 copper/silver response regulator transcription factor SilR 0.35 DZA65_RS19255 thiamine/thiamine pyrophosphate ABC transporter permease ThiP low > 75
Dickeya dianthicola 67-19 0.40 HGI48_RS03485 heavy metal response regulator transcription factor 0.36 HGI48_RS18105 thiamine/thiamine pyrophosphate ABC transporter permease ThiP low > 71
Rhizobium sp. OAE497 0.40 ABIE40_RS05700 response regulator transcription factor 0.30 ABIE40_RS18630 thiamine/thiamine pyrophosphate ABC transporter permease ThiP low > 107
Enterobacter sp. TBS_079 0.40 MPMX20_02319 Transcriptional regulatory protein CusR 0.39 MPMX20_00761 hypothetical protein low > 85
Escherichia coli ECRC101 0.39 MCAODC_26920 cusR copper response regulator transcription factor CusR 0.39 MCAODC_01275 thiP thiamine/thiamine pyrophosphate ABC transporter permease ThiP low > 87
Escherichia coli Nissle 1917 0.39 ECOLIN_RS03125 copper response regulator transcription factor CusR 0.40 ECOLIN_RS00365 thiamine/thiamine pyrophosphate ABC transporter permease ThiP — —
Escherichia coli BW25113 0.39 b0571 cusR DNA-binding response regulator in two-component regulatory system with CusS (NCBI) 0.39 b0067 thiP thiamin ABC transporter membrane protein (NCBI) low > 76
Escherichia coli ECRC99 0.39 KEDOAH_20265 cusR copper response regulator transcription factor CusR 0.39 KEDOAH_17395 thiP thiamine/thiamine pyrophosphate ABC transporter permease ThiP — —
Escherichia coli BL21 0.39 ECD_00532 response regulator in two-component regulatory system with CusS 0.40 ECD_00069 thiamine/thiamine pyrophosphate ABC transporter permease low > 61
Escherichia coli ECOR27 0.39 NOLOHH_24085 cusR copper response regulator transcription factor CusR 0.40 NOLOHH_03105 thiP thiamine/thiamine pyrophosphate ABC transporter permease ThiP low > 76
Escherichia fergusonii Becca 0.39 EFB2_03523 Transcriptional regulatory protein CusR 0.40 EFB2_03978 hypothetical protein low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_03138 Transcriptional regulatory protein CusR 0.40 OHPLBJKB_03591 hypothetical protein low > 74
Escherichia coli ECRC100 0.39 OKFHMN_07705 cusR copper response regulator transcription factor CusR 0.39 OKFHMN_10760 thiP thiamine/thiamine pyrophosphate ABC transporter permease ThiP low > 79
Escherichia coli ECRC62 0.39 BNILDI_22095 cusR copper response regulator transcription factor CusR 0.40 BNILDI_08505 thiP thiamine/thiamine pyrophosphate ABC transporter permease ThiP low > 75
Sinorhizobium meliloti 1021 0.39 SMc02366 transcriptional regulator 0.30 SMc03870 thiamine transporter membrane protein low > 103
Escherichia coli ECOR38 0.39 HEPCGN_00585 cusR copper response regulator transcription factor CusR 0.39 HEPCGN_08740 thiP thiamine/thiamine pyrophosphate ABC transporter permease ThiP low > 88
Escherichia coli ECRC98 0.39 JDDGAC_11350 cusR copper response regulator transcription factor CusR 0.39 JDDGAC_14355 thiP thiamine/thiamine pyrophosphate ABC transporter permease ThiP low > 87
Escherichia coli ECRC102 0.39 NIAGMN_05760 cusR copper response regulator transcription factor CusR 0.39 NIAGMN_08610 thiP thiamine/thiamine pyrophosphate ABC transporter permease ThiP low > 80
Serratia liquefaciens MT49 0.39 IAI46_16745 heavy metal response regulator transcription factor 0.38 IAI46_03310 thiamine/thiamine pyrophosphate ABC transporter permease ThiP low > 87
Pectobacterium carotovorum WPP14 0.38 HER17_RS13650 heavy metal response regulator transcription factor 0.37 HER17_RS03030 thiamine/thiamine pyrophosphate ABC transporter permease ThiP low > 75
Phaeobacter inhibens DSM 17395 0.37 PGA1_c13010 two-component system response regulator 0.27 PGA1_c34040 thiamine transport system permease protein ThiP low > 62
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.36 GFF3273 Putative two-component system response regulator YedW 0.39 GFF173 Thiamin ABC transporter, transmembrane component low > 78
Pantoea agglomerans CFBP13505 P0401 0.36 PagCFBP13505_RS14010 response regulator transcription factor HprR 0.37 PagCFBP13505_RS12960 thiamine/thiamine pyrophosphate ABC transporter permease ThiP low > 74
Dickeya dadantii 3937 0.34 DDA3937_RS03385 heavy metal response regulator transcription factor 0.35 DDA3937_RS18160 thiamine/thiamine pyrophosphate ABC transporter permease ThiP low > 74
Klebsiella michiganensis M5al 0.32 BWI76_RS18590 DNA-binding response regulator 0.38 BWI76_RS04610 thiamine/thiamine pyrophosphate ABC transporter permease ThiP low > 92

Not shown: 74 genomes with orthologs for CSW01_15165 only; 5 genomes with orthologs for CSW01_12860 only