Conservation of cofitness between CSW01_19390 and CSW01_12830 in Vibrio cholerae E7946 ATCC 55056

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_19390 3,4-dihydroxy-2-butanone-4-phosphate synthase 1.0 CSW01_12830 RNase adaptor protein RapZ 0.56 6
Shewanella oneidensis MR-1 0.72 SO0142 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase (NCBI ptt file) 0.56 SO3964 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.71 Shewana3_0134 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase (RefSeq) 0.56 Shewana3_0669 hypothetical protein (RefSeq) low > 73
Shewanella amazonensis SB2B 0.70 Sama_0143 3,4-dihydroxy-2-butanone 4-phosphate synthase (RefSeq) 0.57 Sama_3091 hypothetical protein (RefSeq) low > 62
Shewanella loihica PV-4 0.69 Shew_0040 3,4-dihydroxy-2-butanone 4-phosphate synthase (RefSeq) 0.55 Shew_3314 hypothetical protein (RefSeq)
Pectobacterium carotovorum WPP14 0.67 HER17_RS17145 3,4-dihydroxy-2-butanone-4-phosphate synthase 0.60 HER17_RS20075 RNase adapter RapZ
Serratia liquefaciens MT49 0.66 IAI46_22040 3,4-dihydroxy-2-butanone-4-phosphate synthase 0.60 IAI46_22485 RNase adapter RapZ
Erwinia amylovora T8 0.65 OLJFJH_07655 3 4-dihydroxy-2-butanone 4-phosphate synthase 0.59 OLJFJH_07055 RNase adapter RapZ
Enterobacter sp. TBS_079 0.65 MPMX20_03887 3,4-dihydroxy-2-butanone 4-phosphate synthase 0.60 MPMX20_04111 RNase adapter protein RapZ
Dickeya dadantii 3937 0.65 DDA3937_RS04515 3,4-dihydroxy-2-butanone-4-phosphate synthase 0.60 DDA3937_RS01515 RNase adapter RapZ
Pantoea sp. MT58 0.65 IAI47_03115 3,4-dihydroxy-2-butanone-4-phosphate synthase 0.60 IAI47_17200 RNase adapter RapZ
Dickeya dianthicola ME23 0.64 DZA65_RS04395 3,4-dihydroxy-2-butanone-4-phosphate synthase 0.60 DZA65_RS01495 RNase adapter RapZ
Dickeya dianthicola 67-19 0.64 HGI48_RS04475 3,4-dihydroxy-2-butanone-4-phosphate synthase 0.60 HGI48_RS01430 RNase adapter RapZ
Enterobacter asburiae PDN3 0.64 EX28DRAFT_3078 3,4-dihydroxy-2-butanone 4-phosphate synthase 0.60 EX28DRAFT_3259 Predicted P-loop-containing kinase
Escherichia coli BL21 0.64 ECD_02913 3,4-dihydroxy-2-butanone-4-phosphate synthase 0.60 ECD_03070 adaptor protein for GlmZ/GlmY sRNA decay, glucosamine-6-phosphate-regulated; NTPase
Escherichia coli ECRC101 0.64 MCAODC_09295 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase 0.60 MCAODC_08445 rapZ RNase adapter RapZ
Escherichia coli HS(pFamp)R (ATCC 700891) 0.64 OHPLBJKB_00662 3,4-dihydroxy-2-butanone 4-phosphate synthase 0.60 OHPLBJKB_00495 RNase adapter protein RapZ
Desulfovibrio vulgaris Miyazaki F 0.64 DvMF_2680 3,4-dihydroxy-2-butanone 4-phosphate synthase (RefSeq) 0.35 DvMF_0424 hypothetical protein (RefSeq) low > 51
Escherichia coli ECRC62 0.64 BNILDI_00930 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase 0.60 BNILDI_01810 rapZ RNase adapter RapZ
Escherichia coli ECRC99 0.64 KEDOAH_09365 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase 0.60 KEDOAH_10225 rapZ RNase adapter RapZ
Escherichia coli ECRC98 0.64 JDDGAC_22415 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase 0.60 JDDGAC_21550 rapZ RNase adapter RapZ
Escherichia coli ECRC102 0.64 NIAGMN_16545 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase 0.60 NIAGMN_15685 rapZ RNase adapter RapZ
Escherichia coli ECOR27 0.64 NOLOHH_10585 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase 0.60 NOLOHH_09725 rapZ RNase adapter RapZ
Escherichia coli BW25113 0.64 b3041 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase (NCBI) 0.60 b3205 yhbJ hypothetical protein (NCBI)
Escherichia coli ECOR38 0.64 HEPCGN_17655 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase 0.60 HEPCGN_16800 rapZ RNase adapter RapZ
Escherichia coli ECRC100 0.64 OKFHMN_18780 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase 0.60 OKFHMN_17925 rapZ RNase adapter RapZ
Escherichia coli Nissle 1917 0.64 ECOLIN_RS17585 3,4-dihydroxy-2-butanone-4-phosphate synthase 0.60 ECOLIN_RS18440 RNase adapter RapZ
Escherichia fergusonii Becca 0.64 EFB2_00764 3,4-dihydroxy-2-butanone 4-phosphate synthase 0.60 EFB2_00618 RNase adapter protein RapZ
Klebsiella pneumoniae MKP103 0.64 KDGMDA_05250 3 4-dihydroxy-2-butanone 4-phosphate synthase 0.60 KDGMDA_06095 RNase adapter RapZ
Klebsiella michiganensis M5al 0.63 BWI76_RS24440 3,4-dihydroxy-2-butanone-4-phosphate synthase 0.60 BWI76_RS25280 RNase adaptor protein RapZ
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.63 GFF3160 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) 0.60 GFF2949 Hypothetical ATP-binding protein UPF0042, contains P-loop
Pantoea agglomerans CFBP13505 P0401 0.63 PagCFBP13505_RS11935 3,4-dihydroxy-2-butanone-4-phosphate synthase 0.61 PagCFBP13505_RS09365 RNase adapter RapZ
Erwinia tracheiphila HP pepo 2.2 0.62 IJEDHG_14400 ribB 3 4-dihydroxy-2-butanone-4-phosphate synthase 0.60 IJEDHG_13725 rapZ RNase adapter RapZ
Erwinia tracheiphila SCR3 0.62 LU632_RS20660 ribB 3,4-dihydroxy-2-butanone-4-phosphate synthase 0.60 LU632_RS21295 rapZ RNase adapter RapZ
Rahnella sp. WP5 0.61 EX31_RS08125 3,4-dihydroxy-2-butanone-4-phosphate synthase 0.60 EX31_RS12385 RNase adapter RapZ
Desulfovibrio vulgaris Hildenborough JW710 0.61 DVU1775 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase (TIGR) 0.33 DVU1631 conserved hypothetical protein (TIGR) low > 55
Azospirillum brasilense Sp245 0.59 AZOBR_RS04515 3 4-dihydroxy-2-butanone 4-phosphate synthase 0.39 AZOBR_RS30485 nucleotide-binding protein low > 97
Rhodospirillum rubrum S1H 0.59 Rru_A2197 3,4-Dihydroxy-2-butanone 4-phosphate synthase (NCBI) 0.39 Rru_A3448 Uncharacterized P-loop ATPase protein UPF0042 (NCBI) low > 58
Acinetobacter baumannii LAC-4 0.59 RR41_RS15150 3,4-dihydroxy-2-butanone-4-phosphate synthase 0.41 RR41_RS16040 RNase adapter RapZ low > 55
Burkholderia phytofirmans PsJN 0.58 BPHYT_RS16510 3,4-Dihydroxy-2-butanone 4-phosphate synthase 0.42 BPHYT_RS02885 glmZ(sRNA)-inactivating NTPase low > 109
Azospirillum sp. SherDot2 0.57 MPMX19_03010 3,4-dihydroxy-2-butanone 4-phosphate synthase 0.38 MPMX19_02622 Nucleotide-binding protein
Acinetobacter radioresistens SK82 0.57 MPMX26_00720 3,4-dihydroxy-2-butanone 4-phosphate synthase 0.41 MPMX26_00547 RNase adapter protein RapZ low > 36
Paraburkholderia graminis OAS925 0.57 ABIE53_003472 3,4-dihydroxy 2-butanone 4-phosphate synthase 0.41 ABIE53_000714 UPF0042 nucleotide-binding protein low > 113
Paraburkholderia bryophila 376MFSha3.1 0.56 H281DRAFT_04232 3,4-dihydroxy 2-butanone 4-phosphate synthase 0.42 H281DRAFT_01931 UPF0042 nucleotide-binding protein low > 103
Ralstonia solanacearum IBSBF1503 0.54 RALBFv3_RS18155 3,4-dihydroxy-2-butanone-4-phosphate synthase 0.43 RALBFv3_RS11145 RNase adapter RapZ low > 76
Ralstonia sp. UNC404CL21Col 0.54 ABZR87_RS19085 3,4-dihydroxy-2-butanone-4-phosphate synthase 0.43 ABZR87_RS07035 RNase adapter RapZ low > 80
Ralstonia solanacearum UW163 0.54 UW163_RS20975 3,4-dihydroxy-2-butanone-4-phosphate synthase 0.43 UW163_RS02435 RNase adapter RapZ
Ralstonia solanacearum PSI07 0.53 RPSI07_RS05480 3,4-dihydroxy-2-butanone-4-phosphate synthase 0.43 RPSI07_RS22155 RNase adapter RapZ low > 81
Ralstonia solanacearum GMI1000 0.53 RS_RS22880 3,4-dihydroxy-2-butanone-4-phosphate synthase 0.43 RS_RS01995 RNase adaptor protein RapZ low > 80
Pseudomonas putida KT2440 0.49 PP_0530 3,4-dihydroxy-2-butanone 4-phosphate synthase 0.46 PP_0949 putative ATP-binding protein UPF0042 low > 96
Methylophilus sp. DMC18 0.49 GFF1982 3,4-dihydroxy-2-butanone 4-phosphate synthase 0.44 GFF2266 RNase adapter protein RapZ low > 43
Pseudomonas sp. BP01 0.49 JOY50_RS20050 ribB 3,4-dihydroxy-2-butanone-4-phosphate synthase 0.45 JOY50_RS11115 rapZ RNase adapter RapZ 0.44 23
Pseudomonas sp. SVBP6 0.46 COO64_RS15800 ribB 3,4-dihydroxy-2-butanone-4-phosphate synthase 0.47 COO64_RS04270 rapZ RNase adapter RapZ low > 93

Not shown: 2 genomes with orthologs for CSW01_19390 only; 47 genomes with orthologs for CSW01_12830 only