Conservation of cofitness between CSW01_13560 and CSW01_12725 in Vibrio cholerae E7946 ATCC 55056

106 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_13560 methylenetetrahydrofolate reductase 1.0 CSW01_12725 aspartate carbamoyltransferase 0.62 19
Dickeya dianthicola 67-19 0.80 HGI48_RS20415 methylenetetrahydrofolate reductase 0.75 HGI48_RS01900 aspartate carbamoyltransferase low > 71
Dickeya dianthicola ME23 0.79 DZA65_RS21460 methylenetetrahydrofolate reductase 0.75 DZA65_RS01970 aspartate carbamoyltransferase 0.73 17
Dickeya dadantii 3937 0.79 DDA3937_RS00960 methylenetetrahydrofolate reductase 0.75 DDA3937_RS01925 aspartate carbamoyltransferase low > 74
Enterobacter sp. TBS_079 0.79 MPMX20_04529 5,10-methylenetetrahydrofolate reductase 0.74 MPMX20_00544 Aspartate carbamoyltransferase catalytic subunit 0.65 57
Escherichia coli ECRC102 0.79 NIAGMN_11420 metF methylenetetrahydrofolate reductase 0.75 NIAGMN_09715 pyrB aspartate carbamoyltransferase 0.82 72
Escherichia coli ECRC100 0.79 OKFHMN_13665 metF methylenetetrahydrofolate reductase 0.75 OKFHMN_11865 pyrB aspartate carbamoyltransferase low > 79
Escherichia coli ECRC98 0.79 JDDGAC_17290 metF methylenetetrahydrofolate reductase 0.75 JDDGAC_15505 pyrB aspartate carbamoyltransferase low > 87
Escherichia coli BL21 0.79 ECD_03827 5,10-methylenetetrahydrofolate reductase 0.75 ECD_04113 aspartate carbamoyltransferase, catalytic subunit low > 61
Escherichia coli BW25113 0.79 b3941 metF 5,10-methylenetetrahydrofolate reductase (NCBI) 0.75 b4245 pyrB aspartate carbamoyltransferase catalytic subunit (NCBI) low > 76
Enterobacter asburiae PDN3 0.79 EX28DRAFT_4413 5,10-methylenetetrahydrofolate reductase, prokaryotic form 0.74 EX28DRAFT_3446 aspartate carbamoyltransferase (EC 2.1.3.2)
Escherichia coli ECOR27 0.79 NOLOHH_05810 metF methylenetetrahydrofolate reductase 0.76 NOLOHH_04125 pyrB aspartate carbamoyltransferase low > 76
Escherichia coli ECRC62 0.79 BNILDI_05725 metF methylenetetrahydrofolate reductase 0.75 BNILDI_07385 pyrB aspartate carbamoyltransferase low > 75
Escherichia coli ECRC101 0.79 MCAODC_04165 metF methylenetetrahydrofolate reductase 0.75 MCAODC_02370 pyrB aspartate carbamoyltransferase 0.50 75
Escherichia coli ECRC99 0.79 KEDOAH_14495 metF methylenetetrahydrofolate reductase 0.75 KEDOAH_16290 pyrB aspartate carbamoyltransferase
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_04109 5,10-methylenetetrahydrofolate reductase 0.75 OHPLBJKB_03789 Aspartate carbamoyltransferase catalytic subunit low > 74
Escherichia coli ECOR38 0.78 HEPCGN_12310 metF methylenetetrahydrofolate reductase 0.75 HEPCGN_10060 pyrB aspartate carbamoyltransferase 0.72 79
Pantoea agglomerans CFBP13505 P0401 0.78 PagCFBP13505_RS18450 methylenetetrahydrofolate reductase 0.75 PagCFBP13505_RS08955 aspartate carbamoyltransferase low > 74
Pantoea sp. MT58 0.78 IAI47_00890 methylenetetrahydrofolate reductase 0.74 IAI47_16860 aspartate carbamoyltransferase low > 76
Rahnella sp. WP5 0.78 EX31_RS14205 methylenetetrahydrofolate reductase 0.74 EX31_RS12785 aspartate carbamoyltransferase 0.90 31
Klebsiella michiganensis M5al 0.78 BWI76_RS00805 5,10-methylenetetrahydrofolate reductase 0.76 BWI76_RS02995 aspartate carbamoyltransferase low > 92
Escherichia fergusonii Becca 0.78 EFB2_04672 5,10-methylenetetrahydrofolate reductase 0.75 EFB2_04288 Aspartate carbamoyltransferase catalytic subunit low > 86
Klebsiella pneumoniae MKP103 0.78 KDGMDA_09325 methylenetetrahydrofolate reductase 0.76 KDGMDA_11465 aspartate carbamoyltransferase low > 95
Escherichia coli Nissle 1917 0.78 ECOLIN_RS22760 methylenetetrahydrofolate reductase 0.75 ECOLIN_RS24625 aspartate carbamoyltransferase 0.69 42
Erwinia amylovora T8 0.77 OLJFJH_06105 methylenetetrahydrofolate reductase 0.75 OLJFJH_07330 aspartate carbamoyltransferase low > 58
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF2329 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 0.75 GFF930 Aspartate carbamoyltransferase (EC 2.1.3.2) low > 78
Pectobacterium carotovorum WPP14 0.76 HER17_RS00950 methylenetetrahydrofolate reductase 0.73 HER17_RS19510 aspartate carbamoyltransferase low > 75
Serratia liquefaciens MT49 0.76 IAI46_24530 methylenetetrahydrofolate reductase 0.76 IAI46_02275 aspartate carbamoyltransferase 0.79 16
Shewanella amazonensis SB2B 0.76 Sama_3169 metF 5,10-methylenetetrahydrofolate reductase (RefSeq) 0.33 Sama_0840 aspartate carbamoyltransferase (RefSeq) low > 62
Erwinia tracheiphila HP pepo 2.2 0.75 IJEDHG_13030 metF methylenetetrahydrofolate reductase 0.74 IJEDHG_14060 pyrB aspartate carbamoyltransferase low > 61
Erwinia tracheiphila SCR3 0.75 LU632_RS19630 metF methylenetetrahydrofolate reductase 0.74 LU632_RS20950 pyrB aspartate carbamoyltransferase low > 73
Shewanella loihica PV-4 0.74 Shew_0522 metF 5,10-methylenetetrahydrofolate reductase (RefSeq) 0.33 Shew_1013 aspartate carbamoyltransferase (RefSeq) low > 60
Shewanella sp. ANA-3 0.73 Shewana3_3612 metF 5,10-methylenetetrahydrofolate reductase (RefSeq) 0.34 Shewana3_3070 aspartate carbamoyltransferase (RefSeq) 0.88 61
Shewanella oneidensis MR-1 0.73 SO4054 metF 5,10-methylenetetrahydrofolate reductase (NCBI ptt file) 0.34 SO1301 pyrB aspartate carbamoyltransferase (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.66 MIT1002_03670 5,10-methylenetetrahydrofolate reductase 0.33 MIT1002_00423 Aspartate carbamoyltransferase catalytic chain low > 70
Kangiella aquimarina DSM 16071 0.57 B158DRAFT_2461 5,10-methylenetetrahydrofolate reductase (NAD(P)) (EC 1.5.1.20) 0.34 B158DRAFT_0021 aspartate carbamoyltransferase (EC 2.1.3.2)
Sphingobium sp. HT1-2 0.54 GFF217 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 0.21 GFF1872 Aspartate carbamoyltransferase (EC 2.1.3.2)
Azospirillum sp. SherDot2 0.52 MPMX19_00635 5,10-methylenetetrahydrofolate reductase 0.22 MPMX19_01054 Aspartate carbamoyltransferase 0.66 74
Azospirillum brasilense Sp245 0.51 AZOBR_RS09540 5 10-methylenetetrahydrofolate reductase 0.22 AZOBR_RS20575 aspartate carbamoyltransferase 0.45 66
Magnetospirillum magneticum AMB-1 0.51 AMB_RS02230 methylenetetrahydrofolate reductase 0.23 AMB_RS18300 aspartate carbamoyltransferase
Bosea sp. OAE506 0.49 ABIE41_RS12475 methylenetetrahydrofolate reductase [NAD(P)H] 0.20 ABIE41_RS17230 aspartate carbamoyltransferase catalytic subunit low > 77
Xanthobacter sp. DMC5 0.49 GFF4147 5,10-methylenetetrahydrofolate reductase 0.19 GFF929 Aspartate carbamoyltransferase
Rhodospirillum rubrum S1H 0.48 Rru_A1530 5,10-methylenetetrahydrofolate reductase (NCBI) 0.22 Rru_A3190 Aspartate carbamoyltransferase (NCBI) 0.51 57
Rhodopseudomonas palustris CGA009 0.45 TX73_019175 methylenetetrahydrofolate reductase [NAD(P)H] 0.19 TX73_016120 aspartate carbamoyltransferase catalytic subunit
Phaeobacter inhibens DSM 17395 0.39 PGA1_c11700 5,10-methylenetetrahydrofolate reductase MetF 0.22 PGA1_c03060 aspartate carbamoyltransferase PyrB 0.90 13
Dinoroseobacter shibae DFL-12 0.37 Dshi_2080 5,10-methylenetetrahydrofolate reductase (RefSeq) 0.23 Dshi_3091 aspartate carbamoyltransferase (RefSeq)
Agrobacterium fabrum C58 0.36 Atu2123 methylenetetrahydrofolate reductase 0.20 Atu1308 aspartate carbamoyl transferase catalytic subunit 0.51 48
Marinobacter adhaerens HP15 0.36 HP15_2917 5,10-methylenetetrahydrofolate reductase-like protein 0.24 HP15_3507 aspartate carbamoyltransferase 0.69 47
Pseudomonas sp. BP01 0.35 JOY50_RS09810 metF methylenetetrahydrofolate reductase [NAD(P)H] 0.24 JOY50_RS09700 aspartate carbamoyltransferase catalytic subunit low > 84
Pseudomonas putida KT2440 0.35 PP_4977 5,10-methylenetetrahydrofolate reductase 0.24 PP_4998 Aspartate carbamoyltransferase
Cupriavidus basilensis FW507-4G11 0.35 RR42_RS01385 5,10-methylenetetrahydrofolate reductase 0.23 RR42_RS15860 aspartate carbamoyltransferase catalytic subunit
Dechlorosoma suillum PS 0.35 Dsui_0640 5,10-methylenetetrahydrofolate reductase 0.23 Dsui_0596 aspartate carbamoyltransferase
Sinorhizobium meliloti 1021 0.35 SMc01843 5,10-methylenetetrahydrofolate reductase 0.21 SMc01360 aspartate carbamoyltransferase catalytic subunit 0.85 65
Pseudomonas sp. RS175 0.35 PFR28_04202 5,10-methylenetetrahydrofolate reductase 0.25 PFR28_04237 Aspartate carbamoyltransferase
Pseudomonas sp. DMC3 0.35 GFF171 5,10-methylenetetrahydrofolate reductase 0.25 GFF204 Aspartate carbamoyltransferase
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_2384 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 0.25 Pf1N1B4_2347 Aspartate carbamoyltransferase (EC 2.1.3.2)
Ralstonia solanacearum GMI1000 0.35 RS_RS00460 methylenetetrahydrofolate reductase [NAD(P)H] 0.22 RS_RS03410 aspartate carbamoyltransferase
Pseudomonas orientalis W4I3 0.35 QF045_RS00905 methylenetetrahydrofolate reductase [NAD(P)H] 0.24 QF045_RS01100 aspartate carbamoyltransferase catalytic subunit low > 93
Pseudomonas simiae WCS417 0.35 PS417_26510 5,10-methylenetetrahydrofolate reductase 0.24 PS417_26700 aspartate carbamoyltransferase catalytic subunit
Ralstonia solanacearum UW163 0.35 UW163_RS03705 methylenetetrahydrofolate reductase [NAD(P)H] 0.22 UW163_RS00940 aspartate carbamoyltransferase catalytic subunit
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_4638 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 0.25 Pf6N2E2_4606 Aspartate carbamoyltransferase (EC 2.1.3.2)
Ralstonia solanacearum IBSBF1503 0.35 RALBFv3_RS09875 methylenetetrahydrofolate reductase [NAD(P)H] 0.22 RALBFv3_RS12625 aspartate carbamoyltransferase catalytic subunit
Pseudomonas sp. S08-1 0.35 OH686_10820 methylenetetrahydrofolate reductase [NAD(P)H] 0.23 OH686_10940 aspartate carbamoyltransferase
Ralstonia solanacearum PSI07 0.35 RPSI07_RS23495 methylenetetrahydrofolate reductase [NAD(P)H] 0.22 RPSI07_RS20635 aspartate carbamoyltransferase catalytic subunit
Xanthomonas campestris pv. campestris strain 8004 0.35 Xcc-8004.4336.1 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 0.25 Xcc-8004.1722.1 Aspartate carbamoyltransferase (EC 2.1.3.2)
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_08015 5,10-methylenetetrahydrofolate reductase 0.25 AO353_08135 aspartate carbamoyltransferase catalytic subunit
Pseudomonas stutzeri RCH2 0.34 Psest_0313 5,10-methylenetetrahydrofolate reductase, prokaryotic form 0.24 Psest_0291 aspartate carbamoyltransferase
Pseudomonas fluorescens SBW25-INTG 0.34 PFLU_RS28165 methylenetetrahydrofolate reductase [NAD(P)H] 0.24 PFLU_RS28345 aspartate carbamoyltransferase
Pseudomonas segetis P6 0.34 ACVTMO_RS03200 metF methylenetetrahydrofolate reductase [NAD(P)H] 0.23 ACVTMO_RS03065 aspartate carbamoyltransferase catalytic subunit
Pseudomonas fluorescens SBW25 0.34 PFLU_RS28165 methylenetetrahydrofolate reductase [NAD(P)H] 0.24 PFLU_RS28345 aspartate carbamoyltransferase
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_13605 5,10-methylenetetrahydrofolate reductase 0.25 AO356_13450 aspartate carbamoyltransferase catalytic subunit
Pseudomonas aeruginosa PUPa3 0.34 DQ20_RS37170 metF;go_function=methylenetetrahydrofolate methylenetetrahydrofolate reductase [NAD(P)H] 0.23 DQ20_RS37310 aspartate carbamoyltransferase catalytic subunit low > 101
Pseudomonas sp. SVBP6 0.34 COO64_RS17485 metF methylenetetrahydrofolate reductase [NAD(P)H] 0.24 COO64_RS13575 aspartate carbamoyltransferase catalytic subunit low > 93
Pseudomonas aeruginosa PA14 0.34 IKLFDK_23270 methylenetetrahydrofolate reductase [NAD(P)H] 0.23 IKLFDK_23410 aspartate carbamoyltransferase catalytic subunit low > 98
Ralstonia sp. UNC404CL21Col 0.34 ABZR87_RS04865 methylenetetrahydrofolate reductase [NAD(P)H] 0.22 ABZR87_RS08625 aspartate carbamoyltransferase catalytic subunit 0.70 26
Pseudomonas aeruginosa MRSN321 0.34 DY961_RS22135 metF;go_function=methylenetetrahydrofolate methylenetetrahydrofolate reductase [NAD(P)H] 0.23 DY961_RS21990 aspartate carbamoyltransferase catalytic subunit low > 100
Dyella japonica UNC79MFTsu3.2 0.34 ABZR86_RS11570 methylenetetrahydrofolate reductase [NAD(P)H] 0.24 ABZR86_RS10390 aspartate carbamoyltransferase catalytic subunit
Rhodanobacter denitrificans MT42 0.34 LRK55_RS11765 methylenetetrahydrofolate reductase [NAD(P)H] 0.23 LRK55_RS03990 aspartate carbamoyltransferase catalytic subunit
Methylophilus sp. DMC18 0.34 GFF1492 5,10-methylenetetrahydrofolate reductase 0.23 GFF868 Aspartate carbamoyltransferase
Rhodanobacter denitrificans FW104-10B01 0.34 LRK54_RS12030 methylenetetrahydrofolate reductase [NAD(P)H] 0.23 LRK54_RS04220 aspartate carbamoyltransferase catalytic subunit
Pseudomonas lactucae CFBP13502 0.34 GEMAOFIL_05433 5,10-methylenetetrahydrofolate reductase 0.24 GEMAOFIL_05477 Aspartate carbamoyltransferase
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_1050 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 0.25 PfGW456L13_1016 Aspartate carbamoyltransferase (EC 2.1.3.2)
Lysobacter sp. OAE881 0.34 ABIE51_RS16490 methylenetetrahydrofolate reductase [NAD(P)H] 0.24 ABIE51_RS16015 aspartate carbamoyltransferase catalytic subunit low > 62
Pseudomonas syringae pv. syringae B728a ΔmexB 0.33 Psyr_0459 5,10-methylenetetrahydrofolate reductase 0.23 Psyr_0482 aspartate carbamoyltransferase
Pseudomonas syringae pv. syringae B728a 0.33 Psyr_0459 5,10-methylenetetrahydrofolate reductase 0.23 Psyr_0482 aspartate carbamoyltransferase
Rhodanobacter sp. FW510-T8 0.33 OKGIIK_11830 metF methylenetetrahydrofolate reductase [NAD(P)H] 0.22 OKGIIK_11095 pyrB aspartate carbamoyltransferase catalytic subunit
Acidovorax sp. GW101-3H11 0.33 Ac3H11_3045 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 0.21 Ac3H11_3978 Aspartate carbamoyltransferase (EC 2.1.3.2)
Rhodanobacter sp000427505 FW510-R12 0.33 LRK53_RS16505 methylenetetrahydrofolate reductase [NAD(P)H] 0.23 LRK53_RS05705 aspartate carbamoyltransferase catalytic subunit
Herbaspirillum seropedicae SmR1 0.32 HSERO_RS21425 5,10-methylenetetrahydrofolate reductase 0.22 HSERO_RS02330 aspartate carbamoyltransferase low > 78
Acinetobacter baumannii LAC-4 0.32 RR41_RS05725 methylenetetrahydrofolate reductase [NAD(P)H] 0.23 RR41_RS10085 aspartate carbamoyltransferase catalytic subunit
Acinetobacter radioresistens SK82 0.32 MPMX26_01002 5,10-methylenetetrahydrofolate reductase 0.23 MPMX26_01099 Aspartate carbamoyltransferase low > 36
Hydrogenophaga sp. GW460-11-11-14-LB1 0.31 GFF1692 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 0.21 GFF651 Aspartate carbamoyltransferase (EC 2.1.3.2)
Desulfovibrio vulgaris Hildenborough JW710 0.27 DVU0997 metF 5,10-methylenetetrahydrofolate reductase (TIGR) 0.20 DVU2901 pyrB aspartate carbamoyltransferase (TIGR)
Fusobacterium nucleatum SB010 0.26 HUW76_02285 methylenetetrahydrofolate reductase [NAD(P)H] 0.23 HUW76_08765 aspartate carbamoyltransferase catalytic subunit low > 35
Desulfovibrio vulgaris Miyazaki F 0.26 DvMF_3034 5,10-methylenetetrahydrofolate reductase (RefSeq) 0.19 DvMF_1425 pyrB aspartate carbamoyltransferase catalytic subunit (RefSeq)
Bifidobacterium breve UCC2003 0.23 BBR_RS15410 methylenetetrahydrofolate reductase [NAD(P)H] 0.42 BBR_RS15425 aspartate carbamoyltransferase low > 34
Echinicola vietnamensis KMM 6221, DSM 17526 0.21 Echvi_3637 5,10-methylenetetrahydrofolate reductase, prokaryotic form 0.23 Echvi_4661 aspartate carbamoyltransferase
Cellulophaga baltica 18 0.21 M666_RS08215 methylenetetrahydrofolate reductase [NAD(P)H] 0.24 M666_RS11460 aspartate carbamoyltransferase catalytic subunit low > 67
Pedobacter sp. GW460-11-11-14-LB5 0.20 CA265_RS23445 methylenetetrahydrofolate reductase [NAD(P)H] 0.24 CA265_RS14660 aspartate carbamoyltransferase
Phocaeicola dorei CL03T12C01 0.20 ABI39_RS15570 methylenetetrahydrofolate reductase [NAD(P)H] 0.50 ABI39_RS17400 aspartate carbamoyltransferase
Parabacteroides merdae CL09T00C40 0.20 HMPREF1078_RS07860 methylenetetrahydrofolate reductase [NAD(P)H] 0.51 HMPREF1078_RS01350 aspartate carbamoyltransferase
Phocaeicola vulgatus CL09T03C04 0.20 HMPREF1058_RS01490 methylenetetrahydrofolate reductase [NAD(P)H] 0.50 HMPREF1058_RS03820 aspartate carbamoyltransferase
Mucilaginibacter yixingensis YX-36 DSM 26809 0.20 ABZR88_RS20935 methylenetetrahydrofolate reductase [NAD(P)H] 0.23 ABZR88_RS03460 aspartate carbamoyltransferase catalytic subunit
Pontibacter actiniarum KMM 6156, DSM 19842 0.19 CA264_16780 methylenetetrahydrofolate reductase [NAD(P)H] 0.22 CA264_20465 aspartate carbamoyltransferase low > 74
Bacteroides thetaiotaomicron VPI-5482 0.19 BT3821 5,10-methylenetetrahydrofolate reductase (NCBI ptt file) 0.50 BT0742 aspartate carbamoyltransferase catalytic chain (NCBI ptt file)
Bacteroides stercoris CC31F 0.17 HMPREF1181_RS00120 methylenetetrahydrofolate reductase [NAD(P)H] 0.51 HMPREF1181_RS14990 aspartate carbamoyltransferase low > 56
Bacteroides ovatus ATCC 8483 0.16 BACOVA_03666 methylenetetrahydrofolate reductase (NAD(P)H) 0.50 BACOVA_02450 aspartate carbamoyltransferase

Not shown: 12 genomes with orthologs for CSW01_13560 only; 5 genomes with orthologs for CSW01_12725 only