Conservation of cofitness between CSW01_04555 and CSW01_12695 in Vibrio cholerae E7946 ATCC 55056

18 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_04555 tRNA pseudouridine(65) synthase TruC 1.0 CSW01_12695 lactate dehydrogenase 0.42 14
Pantoea sp. MT58 0.67 IAI47_04065 tRNA pseudouridine(65) synthase TruC 0.40 IAI47_20620 D-2-hydroxyacid dehydrogenase low > 76
Pantoea agglomerans CFBP13505 P0401 0.67 PagCFBP13505_RS16905 tRNA pseudouridine(65) synthase TruC 0.41 PagCFBP13505_RS14205 D-2-hydroxyacid dehydrogenase low > 74
Klebsiella michiganensis M5al 0.66 BWI76_RS22850 tRNA pseudouridine synthase TruC 0.20 BWI76_RS27925 D-isomer specific 2-hydroxyacid dehydrogenase low > 92
Klebsiella pneumoniae MKP103 0.65 KDGMDA_03375 tRNA pseudouridine(65) synthase TruC 0.20 KDGMDA_07690 glyoxylate/hydroxypyruvate reductase GhrB low > 95
Dickeya dianthicola 67-19 0.64 HGI48_RS05085 tRNA pseudouridine(65) synthase TruC 0.22 HGI48_RS00175 glyoxylate/hydroxypyruvate reductase GhrB low > 71
Dickeya dadantii 3937 0.64 DDA3937_RS05085 tRNA pseudouridine(65) synthase TruC 0.21 DDA3937_RS21080 glyoxylate/hydroxypyruvate reductase GhrB low > 74
Dickeya dianthicola ME23 0.64 DZA65_RS05425 tRNA pseudouridine(65) synthase TruC 0.23 DZA65_RS00195 glyoxylate/hydroxypyruvate reductase GhrB low > 75
Pectobacterium carotovorum WPP14 0.63 HER17_RS16365 tRNA pseudouridine(65) synthase TruC 0.46 HER17_RS12825 2-hydroxyacid dehydrogenase low > 75
Shewanella sp. ANA-3 0.59 Shewana3_2824 tRNA pseudouridine synthase C (RefSeq) 0.32 Shewana3_3201 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (RefSeq) low > 73
Shewanella amazonensis SB2B 0.57 Sama_1131 pseudouridylate synthase (RefSeq) 0.31 Sama_2811 glycerate dehydrogenase (RefSeq) low > 62
Shewanella loihica PV-4 0.53 Shew_2643 pseudouridylate synthase (RefSeq) 0.35 Shew_0887 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.50 MIT1002_00998 tRNA pseudouridine synthase C 0.33 MIT1002_04054 Putative 2-hydroxyacid dehydrogenase low > 70
Dechlorosoma suillum PS 0.50 Dsui_3127 23S RNA-specific pseudouridylate synthase 0.46 Dsui_0124 lactate dehydrogenase-like oxidoreductase low > 51
Mucilaginibacter yixingensis YX-36 DSM 26809 0.43 ABZR88_RS18680 pseudouridine synthase 0.30 ABZR88_RS00820 D-2-hydroxyacid dehydrogenase — —
Marinobacter adhaerens HP15 0.43 HP15_1021 tRNA pseudouridine synthase C 0.40 HP15_2931 glycerate dehydrogenase low > 73
Rhodanobacter sp. FW510-T8 0.42 OKGIIK_13270 pseudouridylate synthase 0.22 OKGIIK_04810 D-glycerate dehydrogenase low > 53
Phocaeicola dorei CL03T12C01 0.20 ABI39_RS02130 RNA pseudouridine synthase 0.32 ABI39_RS20195 D-2-hydroxyacid dehydrogenase low > 72
Phocaeicola vulgatus CL09T03C04 0.20 HMPREF1058_RS02790 RNA pseudouridine synthase 0.32 HMPREF1058_RS06435 D-2-hydroxyacid dehydrogenase low > 67

Not shown: 32 genomes with orthologs for CSW01_04555 only; 47 genomes with orthologs for CSW01_12695 only