Conservation of cofitness between CSW01_03880 and CSW01_12610 in Vibrio cholerae E7946 ATCC 55056

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03880 HTH-type transcriptional regulator IscR 1.0 CSW01_12610 3-isopropylmalate dehydratase small subunit 0.58 12
Shewanella loihica PV-4 0.56 Shew_2318 BadM/Rrf2 family transcriptional regulator (RefSeq) 0.65 Shew_3469 isopropylmalate isomerase small subunit (RefSeq) — —
Shewanella sp. ANA-3 0.56 Shewana3_2281 BadM/Rrf2 family transcriptional regulator (RefSeq) 0.64 Shewana3_3758 leuD isopropylmalate isomerase small subunit (RefSeq) low > 73
Escherichia coli HS(pFamp)R (ATCC 700891) 0.54 OHPLBJKB_01178 HTH-type transcriptional regulator IscR 0.73 OHPLBJKB_03586 3-isopropylmalate dehydratase small subunit low > 74
Escherichia coli ECRC100 0.54 OKFHMN_21615 iscR Fe-S cluster assembly transcriptional regulator IscR 0.72 OKFHMN_10730 leuD 3-isopropylmalate dehydratase small subunit low > 79
Escherichia coli ECRC62 0.54 BNILDI_12085 iscR Fe-S cluster assembly transcriptional regulator IscR 0.72 BNILDI_08535 leuD 3-isopropylmalate dehydratase small subunit low > 75
Escherichia coli ECRC101 0.54 MCAODC_12145 iscR Fe-S cluster assembly transcriptional regulator IscR 0.72 MCAODC_01245 leuD 3-isopropylmalate dehydratase small subunit low > 87
Escherichia coli BW25113 0.54 b2531 iscR DNA-binding transcriptional repressor (NCBI) 0.72 b0071 leuD isopropylmalate isomerase small subunit (NCBI) low > 76
Escherichia coli ECRC99 0.54 KEDOAH_06605 iscR Fe-S cluster assembly transcriptional regulator IscR 0.72 KEDOAH_17425 leuD 3-isopropylmalate dehydratase small subunit — —
Escherichia coli ECOR27 0.54 NOLOHH_13285 iscR Fe-S cluster assembly transcriptional regulator IscR 0.72 NOLOHH_03075 leuD 3-isopropylmalate dehydratase small subunit low > 76
Escherichia coli ECRC102 0.54 NIAGMN_19385 iscR Fe-S cluster assembly transcriptional regulator IscR 0.72 NIAGMN_08580 leuD 3-isopropylmalate dehydratase small subunit low > 80
Escherichia fergusonii Becca 0.54 EFB2_01359 HTH-type transcriptional regulator IscR 0.72 EFB2_03974 3-isopropylmalate dehydratase small subunit low > 86
Escherichia coli Nissle 1917 0.54 ECOLIN_RS14370 Fe-S cluster assembly transcriptional regulator IscR 0.72 ECOLIN_RS00385 3-isopropylmalate dehydratase small subunit low > 55
Escherichia coli ECRC98 0.54 JDDGAC_25290 iscR Fe-S cluster assembly transcriptional regulator IscR 0.72 JDDGAC_14325 leuD 3-isopropylmalate dehydratase small subunit low > 87
Escherichia coli ECOR38 0.54 HEPCGN_20755 iscR Fe-S cluster assembly transcriptional regulator IscR 0.72 HEPCGN_08710 leuD 3-isopropylmalate dehydratase small subunit low > 88
Escherichia coli BL21 0.54 ECD_02423 isc operon transcriptional repressor; suf operon transcriptional activator; oxidative stress- and iron starvation-inducible; autorepressor 0.72 ECD_00073 3-isopropylmalate dehydratase small subunit low > 61
Enterobacter sp. TBS_079 0.53 MPMX20_03412 HTH-type transcriptional regulator IscR 0.71 MPMX20_00766 3-isopropylmalate dehydratase small subunit 1 low > 85
Enterobacter asburiae PDN3 0.53 EX28DRAFT_0108 transcriptional regulator, BadM/Rrf2 family 0.74 EX28DRAFT_3667 3-isopropylmalate dehydratase, small subunit low > 76
Paraburkholderia sabiae LMG 24235 0.40 QEN71_RS05780 Fe-S cluster assembly transcriptional regulator IscR 0.57 QEN71_RS17615 3-isopropylmalate dehydratase small subunit low > 153
Burkholderia phytofirmans PsJN 0.40 BPHYT_RS12785 Rrf2 family transcriptional regulator 0.57 BPHYT_RS33905 3-isopropylmalate dehydratase small subunit low > 109
Paraburkholderia bryophila 376MFSha3.1 0.39 H281DRAFT_00477 transcriptional regulator, BadM/Rrf2 family 0.58 H281DRAFT_06073 3-isopropylmalate dehydratase, small subunit — —
Paraburkholderia graminis OAS925 0.39 ABIE53_002782 Rrf2 family iron-sulfur cluster assembly transcriptional regulator 0.56 ABIE53_004803 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit low > 113
Ralstonia solanacearum PSI07 0.39 RPSI07_RS19205 Fe-S cluster assembly transcriptional regulator IscR 0.57 RPSI07_RS14700 3-isopropylmalate dehydratase small subunit — —
Ralstonia sp. UNC404CL21Col 0.39 ABZR87_RS09975 Fe-S cluster assembly transcriptional regulator IscR 0.56 ABZR87_RS14535 3-isopropylmalate dehydratase small subunit low > 80
Dechlorosoma suillum PS 0.38 Dsui_2369 iron-sulfur cluster assembly transcription factor IscR 0.53 Dsui_3199 3-isopropylmalate dehydratase, small subunit — —

Not shown: 0 genomes with orthologs for CSW01_03880 only; 93 genomes with orthologs for CSW01_12610 only