Conservation of cofitness between CSW01_02270 and CSW01_12445 in Vibrio cholerae E7946 ATCC 55056

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02270 malate dehydrogenase 1.0 CSW01_12445 DNA repair protein RecO 0.52 15
Escherichia coli ECOR27 0.82 NOLOHH_09595 mdh malate dehydrogenase 0.63 NOLOHH_13095 recO DNA repair protein RecO low > 76
Escherichia coli Nissle 1917 0.82 ECOLIN_RS18555 malate dehydrogenase 0.62 ECOLIN_RS14520 DNA repair protein RecO — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.82 OHPLBJKB_00468 Malate dehydrogenase 0.63 OHPLBJKB_01142 DNA repair protein RecO low > 74
Escherichia coli ECRC62 0.82 BNILDI_01940 mdh malate dehydrogenase 0.63 BNILDI_11895 recO DNA repair protein RecO low > 75
Escherichia coli ECRC98 0.82 JDDGAC_21420 mdh malate dehydrogenase 0.62 JDDGAC_25085 recO DNA repair protein RecO low > 87
Escherichia fergusonii Becca 0.82 EFB2_00594 Malate dehydrogenase 0.63 EFB2_01331 DNA repair protein RecO low > 86
Escherichia coli BW25113 0.82 b3236 mdh malate dehydrogenase (NCBI) 0.62 b2565 recO DNA repair protein RecO (NCBI) low > 76
Escherichia coli BL21 0.82 ECD_03096 malate dehydrogenase, NAD(P)-binding 0.62 ECD_02459 gap repair protein low > 61
Escherichia coli ECRC100 0.82 OKFHMN_17795 mdh malate dehydrogenase 0.62 OKFHMN_21420 recO DNA repair protein RecO low > 79
Escherichia coli ECRC101 0.82 MCAODC_08315 mdh malate dehydrogenase 0.62 MCAODC_11950 recO DNA repair protein RecO low > 87
Escherichia coli ECRC102 0.82 NIAGMN_15555 mdh malate dehydrogenase 0.62 NIAGMN_19190 recO DNA repair protein RecO low > 80
Escherichia coli ECRC99 0.82 KEDOAH_10355 mdh malate dehydrogenase 0.62 KEDOAH_06800 recO DNA repair protein RecO — —
Escherichia coli ECOR38 0.82 HEPCGN_16660 mdh malate dehydrogenase 0.63 HEPCGN_20565 recO DNA repair protein RecO low > 88
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.81 GFF2149 Malate dehydrogenase (EC 1.1.1.37) 0.62 GFF2473 DNA recombination and repair protein RecO low > 78
Shewanella sp. ANA-3 0.81 Shewana3_3509 malate dehydrogenase (RefSeq) 0.28 Shewana3_3024 DNA repair protein RecO (RefSeq) low > 73
Enterobacter asburiae PDN3 0.81 EX28DRAFT_3285 malate dehydrogenase (NAD) (EC 1.1.1.37) 0.63 EX28DRAFT_0081 DNA replication and repair protein RecO low > 76
Enterobacter sp. TBS_079 0.81 MPMX20_04140 Malate dehydrogenase 0.56 MPMX20_03436 DNA repair protein RecO low > 85
Klebsiella pneumoniae MKP103 0.81 KDGMDA_06200 malate dehydrogenase 0.64 KDGMDA_28435 DNA repair protein RecO low > 95
Klebsiella michiganensis M5al 0.81 BWI76_RS25420 malate dehydrogenase 0.63 BWI76_RS21310 DNA repair protein RecO low > 92
Shewanella oneidensis MR-1 0.81 SO0770 mdh malate dehydrogenase (NCBI ptt file) 0.28 SO1350 recO DNA repair protein RecO (NCBI ptt file) low > 76
Pantoea agglomerans CFBP13505 P0401 0.80 PagCFBP13505_RS11115 malate dehydrogenase 0.61 PagCFBP13505_RS14780 DNA repair protein RecO low > 74
Pectobacterium carotovorum WPP14 0.80 HER17_RS18390 malate dehydrogenase 0.63 HER17_RS05825 DNA repair protein RecO low > 75
Shewanella amazonensis SB2B 0.80 Sama_0672 malate dehydrogenase (RefSeq) 0.26 Sama_0882 DNA repair protein RecO (RefSeq) low > 62
Pantoea sp. MT58 0.80 IAI47_02520 malate dehydrogenase 0.63 IAI47_04890 DNA repair protein RecO low > 76
Shewanella loihica PV-4 0.79 Shew_0867 malate dehydrogenase (RefSeq) 0.27 Shew_1056 DNA repair protein RecO (RefSeq) low > 60
Erwinia tracheiphila SCR3 0.79 LU632_RS21365 mdh malate dehydrogenase 0.63 LU632_RS15375 recO DNA repair protein RecO low > 73
Erwinia tracheiphila HP pepo 2.2 0.79 IJEDHG_13655 mdh malate dehydrogenase 0.63 IJEDHG_01180 recO DNA repair protein RecO low > 61
Serratia liquefaciens MT49 0.79 IAI46_01825 malate dehydrogenase 0.61 IAI46_19540 DNA repair protein RecO low > 87
Rahnella sp. WP5 0.79 EX31_RS08645 malate dehydrogenase 0.62 EX31_RS21845 DNA repair protein RecO low > 89
Dickeya dadantii 3937 0.79 DDA3937_RS02970 malate dehydrogenase 0.63 DDA3937_RS15725 DNA repair protein RecO low > 74
Dickeya dianthicola ME23 0.79 DZA65_RS03130 malate dehydrogenase 0.63 DZA65_RS16890 DNA repair protein RecO 0.56 56
Dickeya dianthicola 67-19 0.79 HGI48_RS03135 malate dehydrogenase 0.63 HGI48_RS15810 DNA repair protein RecO low > 71
Erwinia amylovora T8 0.77 OLJFJH_06980 malate dehydrogenase 0.61 OLJFJH_10265 DNA repair protein RecO low > 58
Alteromonas macleodii MIT1002 0.69 MIT1002_03492 Malate dehydrogenase 0.31 MIT1002_00790 Recombination protein O — —
Dinoroseobacter shibae DFL-12 0.17 Dshi_2876 malate dehydrogenase, NAD-dependent (RefSeq) 0.12 Dshi_0203 DNA repair protein RecO (RefSeq) — —
Pseudomonas sp. BP01 0.12 JOY50_RS27245 malate dehydrogenase 0.24 JOY50_RS14705 recO DNA repair protein RecO low > 84
Rhodanobacter sp000427505 FW510-R12 0.10 LRK53_RS09435 malate dehydrogenase 0.27 LRK53_RS11965 DNA repair protein RecO low > 59
Rhodanobacter denitrificans MT42 0.10 LRK55_RS00495 malate dehydrogenase 0.27 LRK55_RS16695 DNA repair protein RecO — —
Rhodanobacter denitrificans FW104-10B01 0.10 LRK54_RS00720 malate dehydrogenase 0.27 LRK54_RS16980 DNA repair protein RecO — —
Rhodanobacter sp. FW510-T8 0.09 OKGIIK_06530 mdh malate dehydrogenase 0.26 OKGIIK_07860 recO DNA repair protein RecO — —

Not shown: 33 genomes with orthologs for CSW01_02270 only; 36 genomes with orthologs for CSW01_12445 only