| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_06735 | | methylisocitrate lyase | 1.0 | CSW01_12320 | | 3',5'-cyclic-AMP phosphodiesterase | 0.86 | 17 |
| Marinobacter adhaerens HP15 | 0.68 | HP15_1932 | | methylisocitrate lyase 2 | 0.34 | HP15_456 | | phosphohydrolase | — | — |
| Alteromonas macleodii MIT1002 | 0.67 | MIT1002_03129 | | Methylisocitrate lyase | 0.21 | MIT1002_00673 | | 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA | low | > 70 |
| Shewanella loihica PV-4 | 0.67 | Shew_1820 | prpB | 2-methylisocitrate lyase (RefSeq) | 0.41 | Shew_0547 | | calcineurin phosphoesterase C-terminal domain-containing protein (RefSeq) | — | — |
| Pseudomonas aeruginosa MRSN321 | 0.65 | DY961_RS08515 | prpB;go_function=methylisocitrate | methylisocitrate lyase | 0.39 | DY961_RS10640 | cpdA;go_function=3'%2C5'-cyclic-AMP | 3' 5'-cyclic-AMP phosphodiesterase | — | — |
| Pseudomonas aeruginosa PUPa3 | 0.65 | DQ20_RS44335 | prpB;go_function=methylisocitrate | methylisocitrate lyase | 0.39 | DQ20_RS51420 | cpdA;go_function=3'%2C5'-cyclic-AMP | 3' 5'-cyclic-AMP phosphodiesterase | — | — |
| Pseudomonas aeruginosa PA14 | 0.65 | IKLFDK_03445 | | methylisocitrate lyase | 0.38 | IKLFDK_28695 | | 3' 5'-cyclic-AMP phosphodiesterase | — | — |
| Kangiella aquimarina DSM 16071 | 0.64 | B158DRAFT_1343 | | methylisocitrate lyase | 0.31 | B158DRAFT_0977 | | Predicted phosphohydrolases | low | > 40 |
| Pseudomonas sp. RS175 | 0.64 | PFR28_02928 | | 2-methylisocitrate lyase | 0.39 | PFR28_05096 | | '3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA' transl_table=11 | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.64 | AO353_00900 | | 2-methylisocitrate lyase | 0.40 | AO353_13035 | | serine/threonine protein phosphatase | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.64 | AO356_20865 | | 2-methylisocitrate lyase | 0.41 | AO356_08785 | | serine/threonine protein phosphatase | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.63 | Pf1N1B4_3819 | | Methylisocitrate lyase (EC 4.1.3.30) | 0.39 | Pf1N1B4_1442 | | 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.63 | Pf6N2E2_6061 | | Methylisocitrate lyase (EC 4.1.3.30) (from data) | 0.41 | Pf6N2E2_3639 | | 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) | — | — |
| Pseudomonas sp. DMC3 | 0.63 | GFF5230 | | 2-methylisocitrate lyase | 0.38 | GFF3188 | | 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA | — | — |
| Pseudomonas sp. SVBP6 | 0.63 | COO64_RS09900 | prpB | methylisocitrate lyase | 0.36 | COO64_RS17780 | cpdA | 3',5'-cyclic-AMP phosphodiesterase | — | — |
| Pseudomonas putida KT2440 | 0.63 | PP_2334 | | 2-methylisocitrate lyase | 0.37 | PP_4917 | | 3',5'-cyclic-nucleotide phosphodiesterase | low | > 96 |
| Pseudomonas simiae WCS417 | 0.63 | PS417_21080 | | 2-methylisocitrate lyase | 0.41 | PS417_02380 | | serine/threonine protein phosphatase | — | — |
| Pseudomonas stutzeri RCH2 | 0.63 | Psest_2321 | | methylisocitrate lyase | 0.38 | Psest_0481 | | Predicted phosphohydrolases | — | — |
| Shewanella sp. ANA-3 | 0.63 | Shewana3_3825 | prpB | 2-methylisocitrate lyase (RefSeq) | 0.44 | Shewana3_0728 | | calcineurin phosphoesterase C-terminal domain-containing protein (RefSeq) | low | > 73 |
| Pseudomonas sp. BP01 | 0.63 | JOY50_RS25750 | prpB | methylisocitrate lyase | 0.38 | JOY50_RS17115 | cpdA | 3',5'-cyclic-AMP phosphodiesterase | — | — |
| Shewanella oneidensis MR-1 | 0.63 | SO0345 | prpB | methylisocitrate lyase (NCBI ptt file) | 0.44 | SO3901 | icc | lacZ expression regulator (NCBI ptt file) | low | > 76 |
| Ralstonia solanacearum IBSBF1503 | 0.63 | RALBFv3_RS02670 | | methylisocitrate lyase | 0.21 | RALBFv3_RS21090 | | phosphohydrolase | low | > 76 |
| Ralstonia solanacearum UW163 | 0.63 | UW163_RS11055 | | methylisocitrate lyase | 0.21 | UW163_RS22230 | | phosphohydrolase | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.63 | PfGW456L13_4118 | | Methylisocitrate lyase (EC 4.1.3.30) | 0.40 | PfGW456L13_180 | | 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) | — | — |
| Pseudomonas orientalis W4I3 | 0.63 | QF045_RS22905 | | methylisocitrate lyase | 0.37 | QF045_RS05440 | | 3',5'-cyclic-AMP phosphodiesterase | low | > 93 |
| Pseudomonas fluorescens SBW25-INTG | 0.62 | PFLU_RS22690 | | methylisocitrate lyase | 0.41 | PFLU_RS02455 | | 3',5'-cyclic-AMP phosphodiesterase | low | > 109 |
| Pseudomonas lactucae CFBP13502 | 0.62 | GEMAOFIL_04361 | | 2-methylisocitrate lyase | 0.40 | GEMAOFIL_00713 | | '3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA' transl_table=11 | low | > 96 |
| Pseudomonas fluorescens SBW25 | 0.62 | PFLU_RS22690 | | methylisocitrate lyase | 0.41 | PFLU_RS02455 | | 3',5'-cyclic-AMP phosphodiesterase | low | > 109 |
| Pseudomonas segetis P6 | 0.62 | ACVTMO_RS13040 | prpB | methylisocitrate lyase | 0.39 | ACVTMO_RS20730 | cpdA | 3',5'-cyclic-AMP phosphodiesterase | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.62 | Psyr_2085 | | methylisocitrate lyase | 0.39 | Psyr_0549 | | Metallophosphoesterase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.62 | Psyr_2085 | | methylisocitrate lyase | 0.39 | Psyr_0549 | | Metallophosphoesterase | low | > 86 |
| Ralstonia solanacearum GMI1000 | 0.62 | RS_RS10050 | | methylisocitrate lyase | 0.20 | RS_RS19730 | | phosphohydrolase | low | > 80 |
| Paraburkholderia sabiae LMG 24235 | 0.62 | QEN71_RS17555 | | methylisocitrate lyase | 0.15 | QEN71_RS05540 | | phosphodiesterase | low | > 153 |
| Cupriavidus basilensis FW507-4G11 | 0.62 | RR42_RS11260 | | Methylisocitrate lyase (EC 4.1.3.30) (from data) | 0.18 | RR42_RS27795 | | metallophosphatase | low | > 128 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.62 | OHPLBJKB_03339 | | 2-methylisocitrate lyase | 0.50 | OHPLBJKB_00671 | | '3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA' transl_table=11 | low | > 74 |
| Escherichia coli BW25113 | 0.62 | b0331 | prpB | 2-methylisocitrate lyase (NCBI) | 0.50 | b3032 | cpdA | cyclic 3',5'-adenosine monophosphate phosphodiesterase (NCBI) | low | > 76 |
| Escherichia coli ECOR38 | 0.62 | HEPCGN_07485 | prpB | methylisocitrate lyase | 0.50 | HEPCGN_17695 | cpdA | 3',5'-cyclic-AMP phosphodiesterase | low | > 88 |
| Escherichia coli BL21 | 0.62 | ECD_00286 | | 2-methylisocitrate lyase | 0.49 | ECD_02904 | | 3',5' cAMP phosphodiesterase | low | > 61 |
| Escherichia coli ECOR27 | 0.62 | NOLOHH_01775 | prpB | methylisocitrate lyase | 0.50 | NOLOHH_10625 | cpdA | 3',5'-cyclic-AMP phosphodiesterase | low | > 76 |
| Escherichia coli ECRC62 | 0.62 | BNILDI_23190 | prpB | methylisocitrate lyase | 0.50 | BNILDI_00890 | cpdA | 3',5'-cyclic-AMP phosphodiesterase | low | > 75 |
| Escherichia fergusonii Becca | 0.62 | EFB2_03706 | | 2-methylisocitrate lyase | 0.50 | EFB2_00776 | | 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA | low | > 86 |
| Escherichia coli ECRC98 | 0.61 | JDDGAC_12555 | prpB | methylisocitrate lyase | 0.50 | JDDGAC_22455 | cpdA | 3',5'-cyclic-AMP phosphodiesterase | low | > 87 |
| Escherichia coli ECRC100 | 0.61 | OKFHMN_08900 | prpB | methylisocitrate lyase | 0.50 | OKFHMN_18820 | cpdA | 3',5'-cyclic-AMP phosphodiesterase | low | > 79 |
| Shewanella amazonensis SB2B | 0.61 | Sama_3294 | prpB | 2-methylisocitrate lyase (RefSeq) | 0.43 | Sama_3045 | | lacZ expression regulator (RefSeq) | low | > 62 |
| Escherichia coli ECRC99 | 0.61 | KEDOAH_19065 | prpB | methylisocitrate lyase | 0.50 | KEDOAH_09325 | cpdA | 3',5'-cyclic-AMP phosphodiesterase | — | — |
| Escherichia coli ECRC102 | 0.61 | NIAGMN_06955 | prpB | methylisocitrate lyase | 0.50 | NIAGMN_16585 | cpdA | 3',5'-cyclic-AMP phosphodiesterase | low | > 80 |
| Escherichia coli Nissle 1917 | 0.61 | ECOLIN_RS02150 | | methylisocitrate lyase | 0.50 | ECOLIN_RS17500 | | 3',5'-cyclic-AMP phosphodiesterase | low | > 55 |
| Escherichia coli ECRC101 | 0.61 | MCAODC_28130 | prpB | methylisocitrate lyase | 0.50 | MCAODC_09335 | cpdA | 3',5'-cyclic-AMP phosphodiesterase | low | > 87 |
| Acinetobacter radioresistens SK82 | 0.60 | MPMX26_01289 | | 2-methylisocitrate lyase | 0.31 | MPMX26_00178 | | 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA | — | — |
| Acinetobacter baumannii LAC-4 | 0.60 | RR41_RS18485 | | methylisocitrate lyase | 0.33 | RR41_RS17725 | | 3',5'-cyclic-AMP phosphodiesterase | low | > 55 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.59 | GFF4263 | | Methylisocitrate lyase (EC 4.1.3.30) | 0.49 | GFF3146 | | '3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17)' transl_table=11 | low | > 78 |
| Pseudomonas sp. S08-1 | 0.56 | OH686_01690 | | methylisocitrate lyase | 0.41 | OH686_15825 | | 3',5'-cyclic-nucleotide phosphodiesterase | — | — |
| Xanthobacter sp. DMC5 | 0.32 | GFF2763 | | 2,3-dimethylmalate lyase | 0.16 | GFF4007 | | 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA | — | — |
| Azospirillum sp. SherDot2 | 0.31 | MPMX19_04657 | | 2,3-dimethylmalate lyase | 0.18 | MPMX19_04066 | | 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA | low | > 112 |
| Dickeya dianthicola 67-19 | 0.14 | HGI48_RS06990 | | phosphoenolpyruvate mutase | 0.53 | HGI48_RS01650 | | 3',5'-cyclic-AMP phosphodiesterase | low | > 71 |
| Dickeya dianthicola ME23 | 0.14 | DZA65_RS07470 | | phosphoenolpyruvate mutase | 0.53 | DZA65_RS01725 | | 3',5'-cyclic-AMP phosphodiesterase | low | > 75 |
Not shown: 20 genomes with orthologs for CSW01_06735 only; 16 genomes with orthologs for CSW01_12320 only